Candida tropicalis: CTRG_01108
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Entry
CTRG_01108 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K07466
replication factor A1
Organism
ctp
Candida tropicalis
Pathway
ctp03030
DNA replication
ctp03420
Nucleotide excision repair
ctp03430
Mismatch repair
ctp03440
Homologous recombination
ctp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTRG_01108
03420 Nucleotide excision repair
CTRG_01108
03430 Mismatch repair
CTRG_01108
03440 Homologous recombination
CTRG_01108
03460 Fanconi anemia pathway
CTRG_01108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctp03000
]
CTRG_01108
03032 DNA replication proteins [BR:
ctp03032
]
CTRG_01108
03400 DNA repair and recombination proteins [BR:
ctp03400
]
CTRG_01108
Transcription factors [BR:
ctp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
CTRG_01108
DNA replication proteins [BR:
ctp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
CTRG_01108
DNA repair and recombination proteins [BR:
ctp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
CTRG_01108
MMR (mismatch excision repair)
CTRG_01108
DSBR (double strand breaks repair)
HR (homologous recombination)
CTRG_01108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
POT1
BRCA-2_OB1
zf_DPOE_2
RADX
Motif
Other DBs
NCBI-GeneID:
8301621
NCBI-ProteinID:
XP_002546803
UniProt:
C5M5H8
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MSLSKGALKQAFSKDGYDKVQMPMILQITNIKSVDLPNDVKKYRILLNDGVYSTHGLIDE
TCNEYIKNNNCQRYSIVQVNSFSIFATQKHFFVIKNLEILSPTSEKSSVPLIPLDTYFAE
HPNEGHLTLTKKSEGDSPAPATPSIPQATTASVQPFQAQVKQPVPANTAASARGPAPRTL
SIELISPYQNNWTIKARVSYKGDLRTWSNSKGEGKVFSVNFLDESDEIKASAFNETAERA
YRSLEEGKVYYISKARVQAARKKFNTLSHPYELTLDRDTEITECFDESDVPKLNFNFVKL
DQVQNLEANSIIDVIGVLKTVLPPFTITAKSTGKEFNRRNISIVDETGFSVELGLWNNTA
MDFSVEEGTVVAFKGCKVTDFNGKTLSLTQAGSIVPNPGTPESFTLKGWYDNVGVNEQFK
TLKTDKNSGDRIAQRVSIAQALEEHVGTGDKPDYFSVKASITFCKPDNFAYPACTNQVQH
GDGSRPPQLCNKKLIYQDHDGTWRCEKCDANYDQAAYRYILSCSVTDSTGQMWLTLFDEQ
AKKLLDIDATELQRKKEENPDAASAIFTSVLFKEFVFRVRARQDTYNDELKTRYQAAGLY
DINYTSEAEFLTKELDQLLL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcattatccaaaggcgctttgaaacaagcattttccaaagatggctatgataaagtt
caaatgccaatgatccttcaaattaccaacattaagtcggtagatttaccaaatgatgtt
aaaaagtatagaatattattgaacgatggcgtctattctacccatgggttaattgatgaa
acatgtaatgaatatatcaaaaacaacaattgtcaaagatactcaattgttcaggtcaac
tcgttttccatttttgctactcagaaacatttctttgttataaagaatttagagatatta
tcaccaactagtgaaaaatcctccgtcccgttgattcctcttgatacttattttgctgaa
catccaaatgagggacatttgacattaactaagaaatcagaaggtgattctccagctcct
gctactccatcaattccacaagctactactgcctctgtacaaccttttcaagcccaagtt
aaacaaccagttccagctaatactgctgcttctgctcgtggaccagctccacgtacattg
tctatagaattgatttcaccttatcaaaataactggacaatcaaagccagagtctcttac
aagggtgatcttagaacttggtctaatagcaaaggtgaaggtaaagttttttctgtcaat
ttcttggacgaatccgatgaaatcaaagcttcggctttcaatgaaacagctgaaagagcg
tacagatctttagaagaaggtaaagtatattacatatctaaggctcgtgttcaagctgct
aggaaaaagttcaacacattatctcatccatatgaattgactttagatagagatacagaa
atcactgaatgttttgatgagtctgatgtccctaaactcaactttaattttgtcaagttg
gaccaagtacagaatttagaagccaattccattatcgatgttattggtgttttgaaaaca
gtccttcctccatttaccatcactgccaaatccaccggtaaagagttcaacagaagaaat
atttctattgtcgatgaaactgggttcagtgtagaacttggattgtggaacaacactgct
atggatttcagcgttgaagaaggtactgttgttgctttcaaaggatgtaaagttaccgac
tttaatggtaaaactttgagtttgacccaagctggttcgattgttccaaaccctggcacc
ccagaaagttttacattaaaaggatggtatgataatgttggtgtcaatgaacaatttaaa
acattaaagactgataaaaattccggtgatagaattgcccaaagagtttcaattgctcaa
gcactcgaggagcacgtgggtacgggagataaacctgattatttttcagtgaaagctagt
atcactttctgtaaaccagataattttgcttaccctgcttgtacaaatcaagtacaacac
ggagacggttctagaccaccccaactttgtaataagaagttgatttaccaagatcatgat
ggaacatggagatgtgaaaaatgtgacgccaattatgaccaagctgcttaccgttatatc
ttgagttgttccgtcactgatagcacgggacaaatgtggttgacattgtttgatgaacag
gcaaagaaattacttgatattgatgccacggaattgcaaagaaagaaagaagaaaatcct
gacgctgctagtgcaatttttacttctgtattgttcaaagaatttgtcttcagagttaga
gctagacaagatacgtataatgatgaattgaaaaccagataccaagctgctggactttac
gatattaattatactagtgaagcagaatttttaaccaaagagttggatcaacttttgtta
taa
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