Candida tropicalis: CTRG_01118
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Entry
CTRG_01118 CDS
T01115
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
ctp
Candida tropicalis
Pathway
ctp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CTRG_01118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_01118
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CTRG_01118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_Pom152
Ig-like_POM152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Ig-like_KY
Motif
Other DBs
NCBI-GeneID:
8301631
NCBI-ProteinID:
XP_002546813
UniProt:
C5M5I8
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MDSRERDRRRKRNRQREDHGEPLIPSNVLDQASQRIFVLSLFILIQSWKIYDLVLLKSEI
PSTGEVLTQLNNFTYVLKYAILDGLFLWILPVLNIQYLTFSPFKTLMLTVILNACSIFLV
SSFSLPLLANVFLPVWRFLLQKKELNIIGESIDVNKVIDMDSHFKGQLTIQYLPDSSAKM
NPFHFDQVCLGLENNHLIEMPIEFNTTSGIGYLQIQHTTPDNEIQYLNYTGGSLRKLFRK
DYSHLSKYSEYNRKQDPRVFYLEYPIVKPGMYRIKSVLDNKGNSIRTYKSEFSIADCPSA
KFYYPPNFESTNGFKCLSNIEDDGYPLPWIEMYGTTPAFVKLNLKIDGNEFKMMNLSIAS
DSSRTISRTNFSWLKAIKLVRNILHDEVLKSVASLNIGTNSALEFQLLQIQDSLGNIHRY
EPLSKDKDVWYKLKLRKSPSIGMYDKDQNQELLVGGKKVLYIAHSEEFVEEDFPIGITVV
HTNNHGKTNNFTATFQTKAALDKGLVVDQPGRYQLVTANDKYCPCEIDTKPIDIQLAPIP
TLKIAADPVTDRCLGTVGYNFDFNFTGKTPFKVQYHIYSNISGSLKPVYSDSGRAVRELV
THEKSHSFKFMPPSEGSYTIVFNNLKDANYYKDPLTLDEKTHTFSTYFRHASQIGFQQRE
RIIRTCYGQTSTIPLFFKGNGLFSFDYDFVDVNTRKKLLDTVHVEKVDSYSIETPSQLIG
KTYEVVLSNAKDRFGCDAVYTDKNAPMKVVSRSDIPEVELSQVEQNVTIVEGSHIDIPLK
FKSSIPISGHDKIEIKFQAANTDKVVVKRVSLIGTSIRLSEAGKYWLHLFESNGCKGRVL
NETNSIIVNYYPKPSLKISASEEMLQHTDDSSIHLKPVCFGCTNEITLNLIGQAPFVVDY
EIKLPSGKIESHSMNIDTHEILIKLPTKANGRFEHKFNKVYDSLYTRHKGKVGKADVPKV
IYNINPLPTAQFIPDDHFTQVCENKLFENSVIANIPVKFSGAYPFDVSMILRNEQTGKTR
DLNFRNVMSNSLILNNLDFLGLGDYSLSFTKVVDGNGCESNKFNANDKYLISITQPPNIF
KFDPKRKHYCVGDHVSYNLTGALPVTIFYEYNDKMRKTQSYNYFERLASRPGILNIHGLE
DSGVNSCKVNYTFDPIKQEELRLQVHEIPTVEVNKGDYIIEDLHEGDQTELIFTFLGEPP
FKLTYIRTIEIKKTGKKPVRKLVEKETISDIWNHELVVMASLEGTYEAIEIEDKYCRAIR
KVDYID
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggattctagagaaagggataggagaaggaaacgaaatagacaaagagaagatcatggt
gagccattgatacccagcaatgttcttgatcaagcatcgcaacgtatctttgttctttcg
ctcttcatactaatacagagttggaaaatctatgatctagtattattaaaatcagaaatt
ccatccactggagaagtactaacccaattaaataatttcacatatgttttgaaatacgca
atactagatgggttgtttttatggattctaccagttctaaatatccaatatttaacattt
tccccattcaaaactttgatgttgactgtaatactaaatgcatgttccattttcttagtc
agttccttttcattgccattattagcaaatgtctttttgcctgtttggagatttttatta
caaaagaaagaattgaatattattggagaatcaattgatgtaaacaaagtgatagatatg
gattctcatttcaagggtcaattgacaattcaatatttaccagactcttcggctaagatg
aacccatttcattttgaccaagtttgtcttggtttggaaaataatcatcttattgaaatg
ccaattgaattcaacaccacatcaggaattggatacttgcaaatccaacataccactcct
gataatgaaattcaatacttaaactatactggtggttcattgcgtaaattattcagaaag
gactattcccatttatcaaaatattctgagtacaatagaaaacaagatccaagggtgttt
tatttggaatatccaattgttaaaccagggatgtatagaattaagagtgttttggacaac
aagggtaatagtattcgtacctataaatctgaattcctgattgctgactgtccactggcc
aaattttactacccaccaaattttgaaagcaccaatggattcaagtgtttgtctaatatt
gaagacgatggatacccgttgccgtggatagaaatgtatggtacaaccccggcgtttgtg
aaacttaacttgaaaattgacggtaatgagtttaaaatgatgaatttgagtatcgctctg
gatagttcccgtactatttccagaacaaacttttcttggttgaaagcgattaaattggtg
agaaatatcttacacgacgaagttcttaaatcagttgcatcattaaacataggaaccaat
agtgccttagaattccagttgttacaaattcaagactctcttggaaacattcaccgatat
gaaccactttccaaggataaagatgtgtggtacaaactcaagcttagaaaatccccttca
attgggatgtatgataaagaccaaaatcaagaactacttgttggaggtaaaaaagttttg
tacattgctcattcagaagagtttgttgaagaggatttcccaataggcattactgttgtg
cacacaaacaatcatggcaaaacaaacaacttcactgctacatttcaaaccaaagctgct
ttagacaaaggtttggttgttgaccagccaggaagatatcaattggttactgcaaatgac
aagtattgtccatgtgagattgatactaaaccaattgatattcaattagcaccaatccct
acattaaagatagcagcagacccggttactgataggtgtcttggaacggttggctataat
ttcgattttaatttcactggtaagacaccattcaaagttcagtatcatatttattctaat
atatctggaagtcttaaacctgtttatctggattctggaagagctgtgcgtgagttggtc
acccatgaaaagtcacattctttcaagttcatgccaccaagtgaaggtagctacaccatt
gtttttaataatcttaaagatgctaactattacaaagacccattgacgttggatgaaaaa
actcacacattcctgacatatttcagacatgcatctcaaattggattccaacaaagagag
agaatcatacgcacatgttatggtcaaacttctacaattccacttttctttaaaggaaat
ggtttgttctcatttgattatgattttgttgatgtgaatactaggaagaaattgttggat
actgttcatgttgaaaaagttgatagttatagcattgaaaccccaagtcaattaattgga
aaaacatacgaggttgtattatcaaatgccaaagatagatttggttgtgatgcagtgtat
accgataagaatgccccaatgaaggttgttagtagactggacattccagaagtggagttg
agtcaagtagaacaaaatgtaaccattgttgaaggttcccatattgacatcccattgaaa
ttcaaatcatctattcctatcagcgggcatgataaaattgaaatcaagttccaagctgcc
aacaccgataaagtagttgtgaagcgagttctgttaattggtacatcgatcaggttactg
gaagctggtaaatattggttacatttgtttgaaagcaatgggtgcaaaggtcgtgttttg
aacgaaactaattctatcattgtcaattactatcctaaaccatctttgaagatatctgcc
agtgaagaaatgttgcagcataccgatgactcgtcgattcatttgaaaccggtatgtttt
ggatgcaccaatgaaatcacattgaatttaattggtcaagccccatttgtcgttgattat
gagattaaattaccaagtggtaagattgagtcacattccatgaatattgatacccacgaa
atacttatcaagttgccaacaaaagccaatggtaggtttgaacataaattcaataaggtg
tatgatagtttgtacactagacacaaaggcaaagttggtaaggctgatgttccgaaagtt
atttacaacattaacccactaccaactgcacaatttatacctgatgatcatttcacacaa
gtctgtgaaaataaattatttgaaaattctgttattgccaatataccagtcaagttcagt
ggagcttacccatttgatgtttcaatgattttaagaaatgaacagacaggaaaaacacgt
gatttgaattttagaaatgtgatgtccaattcattgattttgaataatttggacttcctt
ggtttgggagattattcattgagttttacaaaagtagtagatggtaatggatgtgagagt
aacaaatttaatgcaaatgacaaatatttaatttcaattacccaacctcctaatatattc
aagtttgatccgaagaggaaacattactgtgttggtgatcacgtgtcatacaatttgaca
ggtgcattaccagtgactatattttatgaatataacgacaaaatgagaaaaacacaactg
tacaattattttgaaagattggcttcaagacctggtatattgaatattcatgggttggaa
gattctggggtaaattcatgtaaagtaaattacacttttgatcctatcaaacaagaagaa
ttgagacttcaagtacatgaaataccaactgttgaagtgaacaaaggtgactatattatt
gaggatcttcacgagggggatcaaactgagttaatatttacattccttggagaacctccg
tttaagcttacttatattagaactattgaaattaaaaagactggtaaaaaaccggtaagg
aaattggttgaaaaggaaaccatcagtgatatttggaaccatgaattagtagtgatggcc
agtctagagggtacttacgaagcaattgaaattgaagataaatattgtcgtgccattaga
aaagttgactatatagattaa
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integrated database retrieval system
