Candida tropicalis: CTRG_01240
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Entry
CTRG_01240 CDS
T01115
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
ctp
Candida tropicalis
Pathway
ctp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CTRG_01240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctp03021
]
CTRG_01240
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_01240
Transcription machinery [BR:
ctp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CTRG_01240
RNA polymerase I system
CTRG_01240
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
CTRG_01240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5_N
Spt5-NGN
KOW5_SPT5
KOW4_SPT5
KOW
KOWx_SPT5
KOW2_Spt5
KOW1_SPT5
CTD
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
8297512
NCBI-ProteinID:
XP_002546934
UniProt:
C5M5V9
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MSDSEDQNQIGSEPGVPQEDDLTFDEEFRRAADQEDGEETQQSKRPRENEEVDEEDQEEE
EEEEEEDDDEDDEEDEVSHKRKRRRGANQFFDIEAEVDDEDEDDDEDDEEAEMLREEFIT
DDHAPIETVERVDTDDRLHRQFDNRRQKVQDEDAEKIAEELKQRYRKSHTAYRGETSASG
TVSQKLLMPSINDPSIYAIRVSPGKEKELVRKLYKKKRTLERQGTPLDILTVFQRDAFTG
YIYIEAKRPDAIDRALEGMVNVFMRDKLLVPVKEYPDLLKQVKTTDVEVVPGIYVRIKRG
AYKGDLAIVDNLSENGLDVRCKVVPRLDYGVNDTLDKNGKRVKSKIRPQQALFSEHKART
YDPEKLQNGSGRGHFRYANNDYIDGFLYKDFRIQFLQTQDVHPSLEELDKLQIKTDEDGL
NLAAIAATLKNNKGDGKSSTAFQPGDKVEIRRGEQAKTIGLVTEAALTEVTIKVTDSGDP
KFVNQRLTVPASDLRKIFNEGDHVRVVEGRHLDETGLVIKIDGDSVIFVSDQTREDVKVF
ANYLIKATDASSNVDQMKSNYDIKDLVELSSLTVGVIVKAEKNIFGVLTTDGRLIDVKPS
GIASKIIQSRREQVATDRHGMTIRVGDTVKELLGDKSREGAIVHIYKNSLFIKSTEVIEN
LGIFVANRMNVTTVSTKDAMVSKSLGPDLTSMNPNLRLPNPSAMAGLKTRIGGRDKLIYK
DVQVTSGSYKGLKGKVTDADDEFARIELHTKSKKIKVRKQHLNVMVHGEPVPYMRFIGAA
PDERFGAPAMPPTFSSGGRSTWGGATPAVAGGVSNGGASSWGGDRAGGASTWGGKTPAYG
SAGGKTPAYGSAAAGGASTWGGAGAGGASTWGGAGGASSWGGNRGGGASTWGGNRGGASA
WGGNRGGASAWGGNKGNTSAWGGNQERGNTSKWGSNNGGSGNSGAESAWGGNGGASAWGG
GGNSTWGSKKGNNSTWEGNN
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatagtgaagatcaaaatcaaattggatcggaaccaggtgttccacaagaagat
gacttaacttttgatgaagaattcagaagagcagcggatcaagaagatggagaagaaaca
caacaatcaaagcgtccacgtgaaaacgaagaggtcgatgaagaagaccaagaggaggag
gaagaagaagaagaagaagatgatgatgaagatgacgaagaagacgaagtttcccataaa
agaaaaagaagaagaggagctaatcagttctttgatattgaagcagaggtcgatgatgaa
gatgaggacgatgacgaagatgatgaagaagcagaaatgttgagagaagagtttatcaca
gacgatcatgccccaattgaaactgttgaaagagttgatactgatgatagattacataga
caatttgataatcgtcgtcaaaaggttcaagatgaagatgccgaaaaaatagcagaagaa
ttgaaacaaagatatagaaagagtcatactgcctacagaggagaaacttctgctagtggt
acagtatcccaaaagttgttgatgccttctattaacgatccttctatctatgcaattagg
gtgtctccgggtaaagaaaaagaattggttcgtaaattgtacaagaagaaaagaaccctt
gaaagacaaggtactcccttagacattttgacagtcttccaaagagatgcatttacaggt
tatatttacattgaagctaaaagaccggacgccattgacagggcccttgagggtatggtc
aatgtctttatgagagataagttattggtcccagtgaaggagtacccagatttattgaag
caagttaaaaccactgatgttgaagttgttcctggtatctatgtaagaattaagagaggt
gcttacaaaggtgatttagcaatagttgataacttgtcagaaaacgggttagatgtacgt
tgtaaagttgttccaagacttgattatggtgtgaatgatacgctagataaaaacggaaaa
cgtgtgaaatcaaagattagaccacaacaggctttgttcagtgagcacaaagccagaacc
tatgatccagaaaagctccaaaatggaagtggtcgtggacatttccgttatgctaacaat
gactatattgatgggttcttgtacaaggatttcagaatccaattccttcaaacacaagac
gtacacccaagtcttgaagagttggataaacttcaaatcaaaacagatgaagatggtttg
aatttagctgctattgctgccacattgaagaataacaaaggtgacggtaagtcttccact
gcattccaacctggtgataaagttgaaattcgtcgtggggaacaagcaaagacaatcggt
cttgttactgaggctgcattaactgaggtgacaataaaagttactgatagtggtgatcct
aaatttgtcaaccaaagattaactgtccctgccagtgatttaagaaagatattcaatgag
ggtgatcatgttagagtagttgaaggtagacatcttgatgaaactggtttggttattaaa
atcgacggggactccgttatttttgttagtgatcaaaccagagaagatgttaaagtattt
gccaattatttgatcaaagcgacagatgcatcatctaatgtcgatcaaatgaagagtaat
tacgacataaaggatttggtagaattgagtagtttaactgttggtgttattgtgaaagca
gaaaagaatatctttggtgtacttaccactgatggtcgattaattgatgttaagccttca
ggtatcgcttccaagataattcaaagtcgtcgtgaacaagttgccacagataggcacggt
atgaccattagagttggtgacacagttaaggaattgttgggtgataagtctcgagaaggt
gctattgtgcatatttacaaaaactcgttgtttatcaaatctacagaagttatagagaat
ttgggtatttttgttgccaaccgtatgaatgttaccaccgtttccacaaaggatgctatg
gtgtcgaagagtctaggtccagatttgacaagtatgaatccaaacttaagattgccaaat
ccaagtgctatggcaggattgaaaacgagaatcgggggtagagataaattgatatacaaa
gatgttcaagtgactagtggtagttacaaaggattgaaaggtaaagtcactgacgctgat
gatgaatttgccagaattgaattgcacaccaagagtaagaaaatcaaggtgcgtaagcag
catttgaatgttatggtacatggtgaaccggttccatatatgagattcattggcgcagct
ccagatgaacgttttggagccccagctatgcctccaacattctcaagtggtggtagatct
acttggggaggtgctactcctgctgttgcaggtggtgtttctaacggtggtgcttcttca
tggggtggtgatagagcaggtggtgcctcaacatggggtggcaagacccctgcttatggt
agtgctggtggtaaaactcctgcttatggcagtgctgccgctggtggtgcttctacatgg
ggaggtgctggtgccggtggtgcttctacttggggcggtgccggtggtgcttcttcttgg
ggtggaaaccgcggtggtggtgcatcaacctggggtggtaaccgtggaggtgccagtgct
tggggtggaaatcgtggtggtgcgtctgcttggggcggaaataaaggaaacacttctgct
tggggtggaaaccaggaaagaggtaatacatccaaatggggaagtaacaatggtggtagt
ggtaatagtggtgcagaatctgcatggggtggaaatggcggtgccagtgcctggggtgga
ggcggtaactctacctggggtagtaaaaagggcaacaacagtacctgggaaggtaataac
tga
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integrated database retrieval system