KEGG   Candida tropicalis: CTRG_01240
Entry
CTRG_01240        CDS       T01115                                 
Name
(RefSeq) hypothetical protein
  KO
K15172  transcription elongation factor SPT5
Organism
ctp  Candida tropicalis
Pathway
ctp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CTRG_01240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ctp03021]
    CTRG_01240
   03019 Messenger RNA biogenesis [BR:ctp03019]
    CTRG_01240
Transcription machinery [BR:ctp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     CTRG_01240
  RNA polymerase I system
     CTRG_01240
Messenger RNA biogenesis [BR:ctp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     CTRG_01240
SSDB
Motif
Pfam: Spt5_N Spt5-NGN KOW5_SPT5 KOW4_SPT5 KOW KOWx_SPT5 KOW2_Spt5 KOW1_SPT5 CTD KOW7_SPT5
Other DBs
NCBI-GeneID: 8297512
NCBI-ProteinID: XP_002546934
UniProt: C5M5V9
LinkDB
Position
Unknown
AA seq 980 aa
MSDSEDQNQIGSEPGVPQEDDLTFDEEFRRAADQEDGEETQQSKRPRENEEVDEEDQEEE
EEEEEEDDDEDDEEDEVSHKRKRRRGANQFFDIEAEVDDEDEDDDEDDEEAEMLREEFIT
DDHAPIETVERVDTDDRLHRQFDNRRQKVQDEDAEKIAEELKQRYRKSHTAYRGETSASG
TVSQKLLMPSINDPSIYAIRVSPGKEKELVRKLYKKKRTLERQGTPLDILTVFQRDAFTG
YIYIEAKRPDAIDRALEGMVNVFMRDKLLVPVKEYPDLLKQVKTTDVEVVPGIYVRIKRG
AYKGDLAIVDNLSENGLDVRCKVVPRLDYGVNDTLDKNGKRVKSKIRPQQALFSEHKART
YDPEKLQNGSGRGHFRYANNDYIDGFLYKDFRIQFLQTQDVHPSLEELDKLQIKTDEDGL
NLAAIAATLKNNKGDGKSSTAFQPGDKVEIRRGEQAKTIGLVTEAALTEVTIKVTDSGDP
KFVNQRLTVPASDLRKIFNEGDHVRVVEGRHLDETGLVIKIDGDSVIFVSDQTREDVKVF
ANYLIKATDASSNVDQMKSNYDIKDLVELSSLTVGVIVKAEKNIFGVLTTDGRLIDVKPS
GIASKIIQSRREQVATDRHGMTIRVGDTVKELLGDKSREGAIVHIYKNSLFIKSTEVIEN
LGIFVANRMNVTTVSTKDAMVSKSLGPDLTSMNPNLRLPNPSAMAGLKTRIGGRDKLIYK
DVQVTSGSYKGLKGKVTDADDEFARIELHTKSKKIKVRKQHLNVMVHGEPVPYMRFIGAA
PDERFGAPAMPPTFSSGGRSTWGGATPAVAGGVSNGGASSWGGDRAGGASTWGGKTPAYG
SAGGKTPAYGSAAAGGASTWGGAGAGGASTWGGAGGASSWGGNRGGGASTWGGNRGGASA
WGGNRGGASAWGGNKGNTSAWGGNQERGNTSKWGSNNGGSGNSGAESAWGGNGGASAWGG
GGNSTWGSKKGNNSTWEGNN
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgtctgatagtgaagatcaaaatcaaattggatcggaaccaggtgttccacaagaagat
gacttaacttttgatgaagaattcagaagagcagcggatcaagaagatggagaagaaaca
caacaatcaaagcgtccacgtgaaaacgaagaggtcgatgaagaagaccaagaggaggag
gaagaagaagaagaagaagatgatgatgaagatgacgaagaagacgaagtttcccataaa
agaaaaagaagaagaggagctaatcagttctttgatattgaagcagaggtcgatgatgaa
gatgaggacgatgacgaagatgatgaagaagcagaaatgttgagagaagagtttatcaca
gacgatcatgccccaattgaaactgttgaaagagttgatactgatgatagattacataga
caatttgataatcgtcgtcaaaaggttcaagatgaagatgccgaaaaaatagcagaagaa
ttgaaacaaagatatagaaagagtcatactgcctacagaggagaaacttctgctagtggt
acagtatcccaaaagttgttgatgccttctattaacgatccttctatctatgcaattagg
gtgtctccgggtaaagaaaaagaattggttcgtaaattgtacaagaagaaaagaaccctt
gaaagacaaggtactcccttagacattttgacagtcttccaaagagatgcatttacaggt
tatatttacattgaagctaaaagaccggacgccattgacagggcccttgagggtatggtc
aatgtctttatgagagataagttattggtcccagtgaaggagtacccagatttattgaag
caagttaaaaccactgatgttgaagttgttcctggtatctatgtaagaattaagagaggt
gcttacaaaggtgatttagcaatagttgataacttgtcagaaaacgggttagatgtacgt
tgtaaagttgttccaagacttgattatggtgtgaatgatacgctagataaaaacggaaaa
cgtgtgaaatcaaagattagaccacaacaggctttgttcagtgagcacaaagccagaacc
tatgatccagaaaagctccaaaatggaagtggtcgtggacatttccgttatgctaacaat
gactatattgatgggttcttgtacaaggatttcagaatccaattccttcaaacacaagac
gtacacccaagtcttgaagagttggataaacttcaaatcaaaacagatgaagatggtttg
aatttagctgctattgctgccacattgaagaataacaaaggtgacggtaagtcttccact
gcattccaacctggtgataaagttgaaattcgtcgtggggaacaagcaaagacaatcggt
cttgttactgaggctgcattaactgaggtgacaataaaagttactgatagtggtgatcct
aaatttgtcaaccaaagattaactgtccctgccagtgatttaagaaagatattcaatgag
ggtgatcatgttagagtagttgaaggtagacatcttgatgaaactggtttggttattaaa
atcgacggggactccgttatttttgttagtgatcaaaccagagaagatgttaaagtattt
gccaattatttgatcaaagcgacagatgcatcatctaatgtcgatcaaatgaagagtaat
tacgacataaaggatttggtagaattgagtagtttaactgttggtgttattgtgaaagca
gaaaagaatatctttggtgtacttaccactgatggtcgattaattgatgttaagccttca
ggtatcgcttccaagataattcaaagtcgtcgtgaacaagttgccacagataggcacggt
atgaccattagagttggtgacacagttaaggaattgttgggtgataagtctcgagaaggt
gctattgtgcatatttacaaaaactcgttgtttatcaaatctacagaagttatagagaat
ttgggtatttttgttgccaaccgtatgaatgttaccaccgtttccacaaaggatgctatg
gtgtcgaagagtctaggtccagatttgacaagtatgaatccaaacttaagattgccaaat
ccaagtgctatggcaggattgaaaacgagaatcgggggtagagataaattgatatacaaa
gatgttcaagtgactagtggtagttacaaaggattgaaaggtaaagtcactgacgctgat
gatgaatttgccagaattgaattgcacaccaagagtaagaaaatcaaggtgcgtaagcag
catttgaatgttatggtacatggtgaaccggttccatatatgagattcattggcgcagct
ccagatgaacgttttggagccccagctatgcctccaacattctcaagtggtggtagatct
acttggggaggtgctactcctgctgttgcaggtggtgtttctaacggtggtgcttcttca
tggggtggtgatagagcaggtggtgcctcaacatggggtggcaagacccctgcttatggt
agtgctggtggtaaaactcctgcttatggcagtgctgccgctggtggtgcttctacatgg
ggaggtgctggtgccggtggtgcttctacttggggcggtgccggtggtgcttcttcttgg
ggtggaaaccgcggtggtggtgcatcaacctggggtggtaaccgtggaggtgccagtgct
tggggtggaaatcgtggtggtgcgtctgcttggggcggaaataaaggaaacacttctgct
tggggtggaaaccaggaaagaggtaatacatccaaatggggaagtaacaatggtggtagt
ggtaatagtggtgcagaatctgcatggggtggaaatggcggtgccagtgcctggggtgga
ggcggtaactctacctggggtagtaaaaagggcaacaacagtacctgggaaggtaataac
tga

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