Candida tropicalis: CTRG_01394
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Entry
CTRG_01394 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
ctp
Candida tropicalis
Pathway
ctp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CTRG_01394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctp03009
]
CTRG_01394
Ribosome biogenesis [BR:
ctp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CTRG_01394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D2
Nrap_D4
Nrap_D5
Nrap
Nrap_D3
Nrap_D6
Saccharop_dh_N
Motif
Other DBs
NCBI-GeneID:
8296455
NCBI-ProteinID:
XP_002547088
UniProt:
C5M6B3
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MAKRKLEEQIVEDEEFKSFSDREDENDDIEMEDSNGHSQNGRATSETNNGEDEEDDSTTS
QPPTNKKQKKHQPPNKQLTAQEIQVARETAELFKSNIFKLQIDELMKEVKIKKNHEEKLE
RVLRRLHDLIKQVPTIENLTLQKAEQQFNPKKLVIPFPDPKPTKVNYTFSYLPPEDISLV
GSYGLKTTINPQKGSSIDIALTMPKQIFQPKDYLNYRALYKRAFYLAYLAEHLIHSSKKN
NLPIKISYHYLNDDVLNPVLKLESIQTENPDDLNFVKTKFSINVIAAFPFGIFDTKKLLP
DKNCIRVQAESETLPPTPLYNSSLLSSTAYDYYLKYLYTTKKSAEAFQDACILGRLWLQQ
RGFGSSINKGGFGHFEFSMLMSALLNGGGLNGNKILLHGFSSYQLFKGTIKYLASMDLNS
GYLSFSSLIGETIASKFKEGGFNVPTIFDKNTKLNILWKMTRSSYRQLQLQAQQTLDLLN
DVVKDRFDAILLQKSHFDQMKYDIVISLTAPEDTFDSFGPLEKISYISFDNYFKNRLYAI
LSKALGDRATLISIRNESPAVNYPIHKRKPSNPSTGFIVGLQLNADESDKLVTKGPNNED
KEEGLKFRSFWGNKASLRRFKDGSIQHCVVWNIKDQEPIVLTIIKYALDTHLHSDMSQHL
VTEVATFDRKLPVPLLPAASNQVVTSLTSFTMLRNAFENMSKTLINLELPLNVKTVLPAS
SSLRYTSVLQPVPFAASNPDFWNDCVVQFESSARWPDEISALEKTKSAFLLKIKEELNET
EYTSFVTKDESIPFNEDVTLLNILTPEGYGFRLRVSTERDELLYLRAVENADKQKAYVQN
VYVKFNEKYMGVVKHTRTITQLAQHFQFYSPTVRFFKQWLDSQLLLQHFSEELIELIALK
PFVDPAPYSIPHSVENGFLQILNFIANWNWKEDPLILDLVKSTAEEDVRLSDKLTIQLHR
IIEQNFEKIRETDPTGIKTQLFIGTKDDPSGILWSNDLTLPIATRLTALSRAAINLVKKE
GVTETNLDLIFTPALQDYDFTLEVKANNITASSGVLPPNTFKNLIQPLTSFPDDITTRYD
LIQGYVDELNRKFGNAIIFSSKKFTGLCKDNKNVVGGIFVPANLAKKKFRVNLGINVKPL
DENDEVVINKDSIYDEIQLLGGDLIKSMNIKK
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaaagttagaagaacaaatcgttgaagatgaagaattcaaatcattttct
gatagggaagacgaaaatgatgatatagaaatggaagatagtaatggacattctcaaaat
ggtcgagctacaagtgagactaataatggagaagatgaagaagacgatagtaccacttca
caacctccaaccaacaagaaacaaaagaaacatcaaccaccaaataaacaacttacagca
caggaaatccaagttgcaagagaaacagcagagttgttcaagtctaatatttttaaactt
caaattgatgaattaatgaaagaagttaaaatcaagaaaaatcatgaagaaaaattggaa
agagttttacgtcgtttacatgatttgattaaacaagttcctaccattgaaaacttgact
ttacaaaaagcagagcaacaattcaaccctaaaaaattagtcataccatttccagatcct
aaaccaaccaaagtcaactatactttttcttatttaccaccagaagatatttccttagtt
ggttcatatggtttgaaaactacaattaatcctcaaaagggtctgagtatagatattgct
ttgactatgccaaaacaaatctttcaaccaaaggattatttgaactaccgtgcattatat
aaacgtgccttttatttggcatacttggctgaacatttgattcactcatctaaaaagaac
aatttgccaattaagatttcataccattacctaaatgatgatgtcttgaacccagtcttg
aaacttgaaagtattcaaactgaaaacccagatgatttgaattttgtcaaaacaaaattc
tccattaacgtaattgctgcattcccatttggtatttttgacacaaagaaattacttcca
gataagaattgtatacgagtccaagctgaaagtgagactttaccaccaactccattatac
aattccagtcttctcagtctgactgcttatgattactacttgaagtatttgtacacaacc
aagaagtcggccgaagctttccaagatgcatgtatcttgggtagactctggctacaacaa
agaggattcggttcctcaattaacaaaggaggttttggccactttgaattttcaatgttg
atgagtgctttattgaatggtggtggtttgaatggaaataaaatattgttgcatgggttc
tcctcctaccaattgttcaaaggtactatcaagtatttagcatccatggatttaaacagt
ggttacttatcattttcttcattaatcggagaaaccattgcttccaagtttaaggaaggt
ggattcaatgtaccaacaatttttgataagaacactaaattgaatatattgtggaaaatg
actagaagttcatacagacagttacaattacaagcacaacaaacattagatttgttgaat
gatgttgttaaggacagatttgatgcaattttgttacagaaatcacattttgatcaaatg
aagtatgacattgttatcagtttaactgcaccagaagacacatttgattcatttgggcca
ttggaaaagatatcttatatcagcttcgataactattttaagaatcgtttgtatgccata
ttaagcaaagcattaggtgatagagcaacgttaatttctattagaaatgaaagtcctgct
gtcaattacccaatacataaaagaaagccatccaatccaagtactggatttatcgttgga
ttacaattgaatgcagatgaatcagataaattggtgacaaaaggtccaaataatgaagat
aaagaagaaggtttaaaatttagatcattctggggaaataaagcttcattgagaagattc
aaagatggttctatccaacactgtgttgtttggaatatcaaagatcaggaaccaattgtt
ctaactattataaaatatgcattagatactcatttacattcagatatgtcacaacattta
gtaactgaagtggctacttttgatagaaaattgcctgtcccattgttgccagctgcttct
aaccaagtcgtcacttctttgacaagcttcactatgctcagaaatgcttttgaaaatatg
agtaagacattgatcaatttggagttgccattaaatgtcaagactgttttgccagcctcc
tcatctttgagatacacttctgttttgcaacctgttccatttgccgcttctaatccagat
ttctggaatgattgtgttgtccaatttgaaagttctgcaagatggccagatgaaattagt
gcattagaaaaaacaaaatctgcatttttattgaaaattaaggaagagttgaatgaaact
gaatacacttcatttgtcaccaaagacgaatcaattccatttaatgaagatgttactttg
ttgaatatattgacgccagaaggttatgggttcagacttagagtgtcaactgaacgtgat
gaacttttgtacttgagagcagtggaaaatgcagacaaacaaaaggcatatgtgcaaaat
gtttatgtcaaatttaatgaaaagtatatgggagttgtcaaacacacaagaactatcact
caattggctcaacatttccaattctattcaccaacagtacgattcttcaaacaatggttg
gattcacaattgttattgcaacatttcagtgaagaattgattgagttgattgcattgaaa
ccatttgttgatcctgctccatattctattcctcattctgttgaaaatgggttcttgcaa
attttgaatttcattgcaaactggaactggaaggaagatccgttgattcttgatttggtt
aagagcactgcagaggaagatgttagattgagtgataaattaaccatacaacttcataga
attattgaacaaaactttgaaaaaatcagagaaactgatccaactggtataaaaactcaa
ttatttattggtactaaagatgacccatctggtattttatggtcaaatgacttaacatta
ccaatcgctacaagattaactgcattgtcacgtgccgccatcaatttggttaaaaaggaa
ggtgtaacagaaaccaatttagatttgattttcacacctgcattacaagattatgatttc
acattggaagtcaaagccaataacattacagcatcctctggtgttttgcctcctaataca
tttaaaaatttgattcaaccattgacttcattccctgatgatatcactacaagatatgat
ttgatccaaggttatgttgatgaattgaatagaaaatttggtaatgctatcattttctca
agtaagaaatttaccggattatgtaaagataacaagaatgttgttggtggtatttttgtt
ccagctaatttggcaaagaaaaaatttagagtcaatttgggcatcaatgttaagccactt
gatgaaaatgatgaagtggttatcaataaggactctatttatgacgaaattcaactttta
ggaggtgatttgatcaaatccatgaacattaaaaagtaa
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