KEGG   Candida tropicalis: CTRG_01402
Entry
CTRG_01402        CDS       T01115                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K14792  rRNA biogenesis protein RRP5
Organism
ctp  Candida tropicalis
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ctp03009]
    CTRG_01402
Ribosome biogenesis [BR:ctp03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    CTRG_01402
SSDB
Motif
Pfam: S1 S1_RRP5 OB_RRP5_4th HAT_PRP39_N Spt6_S1 HAT_Syf1_CNRKL1_N HAT_PRP39_C Suf TPR_14 HAT_Syf1_CNRKL1_C TPR_19 ProQ_C TPR_CcmH_CycH BUD22
Other DBs
NCBI-GeneID: 8296463
NCBI-ProteinID: XP_002547096
UniProt: C5M6C1
LinkDB
Position
Unknown
AA seq 1722 aa
MSDSSKSVLSNKEFAFPRGGSKPLSALEVKEISNEAIKDVLFEQAETNKRSGSSKSEQPK
KKQRKQSSKKKSTKGDQDVDDADDKKSVSIENFNFKNIGHGTLILGQIKAINKLDITLAL
GDNLVGYIPITSISAQITKLLEEFDHESSEEEDEEEEKEEDDDGETVATVKFKTEKEFPE
LSSIFKIGSWLKAKVSSSNEDIKTKKRIQLTVEPEFVNESLETDDLIINNILQCSVKSVE
DHGIILDTGKSEYSGFISNKELSNANLEVDSIKPGLVILCAISSKVSGRTINLKPTSSVS
IKKGAVTTISSIDSIQAGVVVDALINEITDNGLITKVYGLVDGTIALSQIHNFDIKDLKH
KYAIGTNVKARVLAVLSKNGTKKLILSILPHVLQLGNHSAEEKALEAFPVGHVFDKVKVI
GNDTNYLYVEFGSSTMIGQVHNSKIDDDKTLLDYTVGSTHKSRVVGFNAVDNLLILTFES
KIIEAKYLKAQDIPIGTLLSNVEILKVLEGGAGINVKVFDDFKGFVPSNQMSDIKLVYPE
RKFRVGSKVKGRLLDIKGKRIYITLRKSLVNLEDDEILSRFDQAEIGFKTNAIVEKFVPN
GCIVKFFGNLRAFLPKTEISETFVDNASNYLKLGQIVKVRVLDINKDEERLIVTLKQSSE
LSNAQKNEISKLESGKSVVNAVIVEKTKDSILVELEESNLRGVVADGQLSDGNYEQNRSL
AKKLKVGEKLEVLILDKDLKARTVIATAKPSLIEAAKGKSFPTDFNDIQINKVVKGYIKS
VTNLGLFVTFTGRLTGLVLAKYVTKNGKEDLTKKFYKYQSVTCRVISIDQENERFLLTLG
SGGANGNEDEELVNPVDKSKKIVADYTPGVSTKALIKAIKGTQLNVQLADNLQGRVDITQ
CFNSIKDIKNEQQPLAANFNKGDLLDVKVIGTHDAKNHTFLPITHRKSNRTTILELSLND
HKVNNKPLSELKLEDVKVGDKLLGFVNNIAKGLVWVSISPSLKGRVSFLDLTNDGSIFQD
IDNKLPIGSAIKVTVKQVDLEHKTLSLTTRDKFVEKFDDVVKGETYPARVLKIKPNHVLV
ELGPDVIASSFITDALENYSDKLDHVYEQNDYVSARVLDIDEDNKRISVSLRDDAEAADK
VINSVSDLERGHVIKGFIKNIANNGVYVSLGRSIHALVRVSDLSDSYLKDWKKFFKPNQM
VIGKIVNCKEEGRVLMTLKESEVNGELKLMKSFDDLSVGDIFEGTVTSTTDFGVFVKLDG
TVNVSGLCHHSEISENDVENVKMLFGDGDRVKVKILKIDSEKKQLSLGMKASYFAEDGDN
HGVDQEESDDDDDQEEEQDIEMEDAEDKEDSEDEEDDIMDVDQEESDNEDESDAEDDDEE
ESDNKSLSTGLSTNGFDWTASILDQAENDDDSSDDDDDEADFGGKSKKKANKKKKSQVTV
EDKTGDLNTRAPQSVSDFERLLIGNPNSSILWMNYMSFQLQLSEIEKAREIGQRALKTIN
YREEQEKLNIWIAMLNLENTFGTDETLEDVFKKAVQYMDAFVIHQKLVNIYIISEKFDQA
IELFKVMTKKFGKNISTWVMYGSFLLDQKLNDEVHEVLSKALSILPKRDHIELVKKFAQL
EFQKGDPEQGRSLFEGLIADAPKRIDLWNIYIDQEIKQDKEEDESSKGKVEELFERVLTK
KITRKQAKFFFNKWLNFEEDKEDESMIARVKAKAAEYVQNNS
NT seq 5169 nt   +upstreamnt  +downstreamnt
atgtctgattcatccaaatcagtactaagtaataaagaatttgcatttccaagaggtggt
tcgaagccattaagtgctttggaagtcaaagagatttccaatgaagccatcaaggatgta
ttatttgaacaagctgaaacaaataaaagatctggttcaagtaaatcagaacaaccaaaa
aagaaacaaagaaaacaatcttctaagaaaaaatctactaaaggtgatcaagatgttgat
gatgccgatgataaaaaatctgtttctattgaaaatttcaattttaagaatattggtcat
ggaactttgatattgggacagatcaaagccattaataaacttgatattactttagcattg
ggtgataacttggtgggatatattccaattacttctattagtgcccaaatcaccaaacta
cttgaagaatttgaccatgaatcatctgaagaagaagacgaggaagaagaaaaagaagaa
gatgatgatggagaaactgtcgctacagtcaagttcaagactgaaaaggaattcccagaa
ttaagttcaattttcaaaatcggatcttggttaaaagcgaaagtatccagttctaatgaa
gacatcaaaactaaaaagagaatacaattgactgttgaaccagaatttgttaatgaaagc
ttggaaactgatgatttgattatcaataatattttacaatgttctgttaaatcagttgaa
gatcatggtattattttggatactggtaaatcagaatactctggatttataagcaacaaa
gaattgagcaatgctaatttggaagttgattcaatcaagccaggcttagttatcttgtgt
gccatttcatccaaagtttctggaagaacaatcaatttgaaaccaaccagtagtgtatct
attaaaaaaggtgctgttactacaatttcatcaatcgactctattcaagctggtgttgtc
gttgatgcattgattaatgaaattactgataacgggttaattaccaaagtctatggtttg
gttgatggtacaatcgcattatctcaaattcacaactttgatattaaagatttaaaacat
aaatacgccattggtaccaatgttaaggctagagttttggctgttctatcaaagaatgga
accaaaaaattgatcttgtcgatattaccacatgtcttacaattgggtaaccattctgct
gaagaaaaggctctagaagcattcccagtgggtcatgtatttgataaagtaaaagttatt
ggtaatgataccaattacttgtatgttgaatttggttcatcaactatgattggtcaagtg
cacaattctaaaattgatgatgataaaacattactagattatactgttggatcaacacac
aaatcaagagttgttggtttcaatgcagtcgacaacttgctcattttgacatttgaatct
aagattatcgaagccaaatatttgaaagcacaagatattcctattggcacattactctcc
aatgttgaaattttgaaagttttggaaggtggtgccggtatcaatgttaaagtttttgat
gactttaaaggatttgttccaagcaaccaaatgtctgacatcaagcttgtttatccagaa
agaaaatttagagttggttccaaagtcaagggtagattattggacatcaagggtaaacgt
atatatatcactttgagaaagtctttggtaaatttggaagatgatgaaattttgtctcgt
tttgatcaagctgaaattggattcaaaaccaatgccattgttgaaaagtttgttcctaat
ggttgtattgttaaattctttggcaatttgagagctttcttgccaaaaactgaaatttct
gaaacttttgttgataatgctagtaactatttgaaattaggacaaattgttaaagtcaga
gttttggacatcaacaaagatgaagaaagactaattgttactttgaaacaatcaagtgaa
ctttctaatgcacaaaagaatgaaattagtaaattagaatccggtaaatcagttgttaac
gctgtcatcgtcgaaaagactaaggattccattttagttgaattggaagaatcaaacttg
agaggtgttgttgctgacggtcaactatctgatggtaattacgaacaaaacagatctctt
gccaagaaattgaaggtcggcgaaaagttagaagtattaattttagacaaagacttgaaa
gcaagaaccgttattgcaactgctaaaccatctttaattgaagctgctaaaggtaaaagt
ttcccaactgatttcaatgatattcaaatcaataaagttgtaaaaggttatatcaaatct
gtcaccaacttgggtttatttgtcacttttactggtagattaaccggtttggttttggct
aaatatgttaccaagaatggcaaggaagatttgaccaagaaattttacaaataccaatct
gttacttgtcgtgtcattagtattgatcaagaaaatgaaagattcttgttaactttggga
tcaggtggtgccaacggtaatgaagatgaagagttggtcaatccagtcgataagtcaaag
aagattgtagctgattacactccaggtgtttctaccaaagctttaatcaaagccatcaag
ggtactcaattgaatgtccaattagctgataatcttcaaggtagagttgacatcactcaa
tgtttcaattccatcaaggatatcaagaatgaacaacagccactagctgctaatttcaat
aaaggtgacttgcttgatgttaaagttattggtactcatgatgccaaaaatcacaccttt
ttgccaatcactcatcgtaaatctaatagaaccactattttggaattatcattgaacgat
cataaagttaataacaagcccttgagtgaattgaaactcgaggatgttaaagttggagat
aaattattaggtttcgtcaataatattgctaaaggtttagtttgggtttctatttctcca
tctcttaaaggtagagtttccttccttgatttgactaatgatggatctattttccaagac
attgacaataaattaccaattggaagcgctatcaaagtcactgttaaacaagttgatttg
gaacacaagacattatcattaacaactagagacaaatttgttgaaaaatttgacgatgtt
gtcaagggagaaacatatcctgctagagttcttaagatcaaaccaaaccatgttttagtg
gaattgggtcctgatgttattgcttcatcatttattactgatgctttggaaaattattct
gataaattagatcatgtttatgaacaaaacgattatgtttccgctagagtattggatatt
gatgaagataacaaacgtatttctgtttctttaagagatgacgcagaggctgcagataaa
gttattaactctgtttctgatttggaacgtggtcatgttatcaaaggttttattaagaat
attgctaataatggtgtttacgtttccttgggtagatcaattcatgctttggttagagtt
tctgatttatctgattcctatttgaaagactggaagaaattcttcaaaccaaaccaaatg
gttattggtaaaattgttaattgtaaagaagaaggtagagttttgatgactttgaaagaa
agtgaagttaatggtgaattgaaattaatgaaaagttttgatgatttatctgttggcgat
attttcgaaggtactgttacttcgaccactgatttcggtgtgtttgttaaattggatggt
actgttaatgtcagtgggttatgtcatcattcagaaatttcagaaaacgatgttgaaaat
gttaaaatgttatttggagatggtgatagagttaaagtcaagatcttgaagattgattca
gaaaagaagcaattgtcattgggtatgaaagcatcttattttgccgaagatggcgacaac
catggtgttgaccaagaagaatccgatgacgacgacgaccaagaagaagagcaagacatt
gaaatggaagatgcagaagataaagaagattctgaagacgaagaagatgatattatggat
gttgaccaagaagaatctgacaacgaagatgaatctgatgcagaagatgacgacgaagaa
gaatctgataacaagtctttgtctactggtttatcaaccaatgggtttgattggactgca
tctattttagatcaagctgaaaatgatgatgattcatcagacgatgatgatgacgaagcc
gactttggtggtaaatctaagaagaaagccaacaaaaagaagaaatcacaagttacagtt
gaagataagactggtgatttgaataccagagccccacaatctgttagtgattttgaaaga
ttattgattggaaatccaaactcttctattttatggatgaactacatgtcattccaatta
caattgagtgaaattgaaaaagcccgtgaaattggtcaaagagctttgaaaactattaac
tatcgtgaagaacaagagaaattaaacatctggattgccatgttgaatttagaaaataca
tttggtacagatgaaacattggaggacgttttcaagaaggctgttcaatatatggatgca
tttgttattcatcaaaaattggttaatatttatatcatttctgagaaattcgatcaagcc
attgaattatttaaagtaatgacaaagaaatttggtaagaacattagtacatgggttatg
tatggatctttcttgttggatcaaaaattgaatgatgaagtccatgaagttttaagcaaa
gccttgagtatattaccaaagagagatcatattgaattagtcaagaaatttgcccaattg
gaattccaaaagggagatccagaacaaggtagatcattatttgaaggtttaattgctgat
gcaccaaagagaattgatttgtggaatatttacattgatcaagaaatcaaacaagataaa
gaagaagatgaaagtagtaaaggtaaagttgaagaattgtttgaaagagtgttaactaaa
aaaattactagaaaacaagccaaattcttctttaataaatggttgaattttgaagaagac
aaagaagatgaaagcatgattgctagagtcaaggctaaagcagccgaatatgttcaaaac
aatagttaa

DBGET integrated database retrieval system