Candida tropicalis: CTRG_01402
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Entry
CTRG_01402 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
ctp
Candida tropicalis
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctp03009
]
CTRG_01402
Ribosome biogenesis [BR:
ctp03009
]
Eukaryotic type
90S particles
Other 90S particles
CTRG_01402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
HAT_PRP39_N
Spt6_S1
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
ProQ_C
TPR_CcmH_CycH
BUD22
Motif
Other DBs
NCBI-GeneID:
8296463
NCBI-ProteinID:
XP_002547096
UniProt:
C5M6C1
LinkDB
All DBs
Position
Unknown
AA seq
1722 aa
AA seq
DB search
MSDSSKSVLSNKEFAFPRGGSKPLSALEVKEISNEAIKDVLFEQAETNKRSGSSKSEQPK
KKQRKQSSKKKSTKGDQDVDDADDKKSVSIENFNFKNIGHGTLILGQIKAINKLDITLAL
GDNLVGYIPITSISAQITKLLEEFDHESSEEEDEEEEKEEDDDGETVATVKFKTEKEFPE
LSSIFKIGSWLKAKVSSSNEDIKTKKRIQLTVEPEFVNESLETDDLIINNILQCSVKSVE
DHGIILDTGKSEYSGFISNKELSNANLEVDSIKPGLVILCAISSKVSGRTINLKPTSSVS
IKKGAVTTISSIDSIQAGVVVDALINEITDNGLITKVYGLVDGTIALSQIHNFDIKDLKH
KYAIGTNVKARVLAVLSKNGTKKLILSILPHVLQLGNHSAEEKALEAFPVGHVFDKVKVI
GNDTNYLYVEFGSSTMIGQVHNSKIDDDKTLLDYTVGSTHKSRVVGFNAVDNLLILTFES
KIIEAKYLKAQDIPIGTLLSNVEILKVLEGGAGINVKVFDDFKGFVPSNQMSDIKLVYPE
RKFRVGSKVKGRLLDIKGKRIYITLRKSLVNLEDDEILSRFDQAEIGFKTNAIVEKFVPN
GCIVKFFGNLRAFLPKTEISETFVDNASNYLKLGQIVKVRVLDINKDEERLIVTLKQSSE
LSNAQKNEISKLESGKSVVNAVIVEKTKDSILVELEESNLRGVVADGQLSDGNYEQNRSL
AKKLKVGEKLEVLILDKDLKARTVIATAKPSLIEAAKGKSFPTDFNDIQINKVVKGYIKS
VTNLGLFVTFTGRLTGLVLAKYVTKNGKEDLTKKFYKYQSVTCRVISIDQENERFLLTLG
SGGANGNEDEELVNPVDKSKKIVADYTPGVSTKALIKAIKGTQLNVQLADNLQGRVDITQ
CFNSIKDIKNEQQPLAANFNKGDLLDVKVIGTHDAKNHTFLPITHRKSNRTTILELSLND
HKVNNKPLSELKLEDVKVGDKLLGFVNNIAKGLVWVSISPSLKGRVSFLDLTNDGSIFQD
IDNKLPIGSAIKVTVKQVDLEHKTLSLTTRDKFVEKFDDVVKGETYPARVLKIKPNHVLV
ELGPDVIASSFITDALENYSDKLDHVYEQNDYVSARVLDIDEDNKRISVSLRDDAEAADK
VINSVSDLERGHVIKGFIKNIANNGVYVSLGRSIHALVRVSDLSDSYLKDWKKFFKPNQM
VIGKIVNCKEEGRVLMTLKESEVNGELKLMKSFDDLSVGDIFEGTVTSTTDFGVFVKLDG
TVNVSGLCHHSEISENDVENVKMLFGDGDRVKVKILKIDSEKKQLSLGMKASYFAEDGDN
HGVDQEESDDDDDQEEEQDIEMEDAEDKEDSEDEEDDIMDVDQEESDNEDESDAEDDDEE
ESDNKSLSTGLSTNGFDWTASILDQAENDDDSSDDDDDEADFGGKSKKKANKKKKSQVTV
EDKTGDLNTRAPQSVSDFERLLIGNPNSSILWMNYMSFQLQLSEIEKAREIGQRALKTIN
YREEQEKLNIWIAMLNLENTFGTDETLEDVFKKAVQYMDAFVIHQKLVNIYIISEKFDQA
IELFKVMTKKFGKNISTWVMYGSFLLDQKLNDEVHEVLSKALSILPKRDHIELVKKFAQL
EFQKGDPEQGRSLFEGLIADAPKRIDLWNIYIDQEIKQDKEEDESSKGKVEELFERVLTK
KITRKQAKFFFNKWLNFEEDKEDESMIARVKAKAAEYVQNNS
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattcatccaaatcagtactaagtaataaagaatttgcatttccaagaggtggt
tcgaagccattaagtgctttggaagtcaaagagatttccaatgaagccatcaaggatgta
ttatttgaacaagctgaaacaaataaaagatctggttcaagtaaatcagaacaaccaaaa
aagaaacaaagaaaacaatcttctaagaaaaaatctactaaaggtgatcaagatgttgat
gatgccgatgataaaaaatctgtttctattgaaaatttcaattttaagaatattggtcat
ggaactttgatattgggacagatcaaagccattaataaacttgatattactttagcattg
ggtgataacttggtgggatatattccaattacttctattagtgcccaaatcaccaaacta
cttgaagaatttgaccatgaatcatctgaagaagaagacgaggaagaagaaaaagaagaa
gatgatgatggagaaactgtcgctacagtcaagttcaagactgaaaaggaattcccagaa
ttaagttcaattttcaaaatcggatcttggttaaaagcgaaagtatccagttctaatgaa
gacatcaaaactaaaaagagaatacaattgactgttgaaccagaatttgttaatgaaagc
ttggaaactgatgatttgattatcaataatattttacaatgttctgttaaatcagttgaa
gatcatggtattattttggatactggtaaatcagaatactctggatttataagcaacaaa
gaattgagcaatgctaatttggaagttgattcaatcaagccaggcttagttatcttgtgt
gccatttcatccaaagtttctggaagaacaatcaatttgaaaccaaccagtagtgtatct
attaaaaaaggtgctgttactacaatttcatcaatcgactctattcaagctggtgttgtc
gttgatgcattgattaatgaaattactgataacgggttaattaccaaagtctatggtttg
gttgatggtacaatcgcattatctcaaattcacaactttgatattaaagatttaaaacat
aaatacgccattggtaccaatgttaaggctagagttttggctgttctatcaaagaatgga
accaaaaaattgatcttgtcgatattaccacatgtcttacaattgggtaaccattctgct
gaagaaaaggctctagaagcattcccagtgggtcatgtatttgataaagtaaaagttatt
ggtaatgataccaattacttgtatgttgaatttggttcatcaactatgattggtcaagtg
cacaattctaaaattgatgatgataaaacattactagattatactgttggatcaacacac
aaatcaagagttgttggtttcaatgcagtcgacaacttgctcattttgacatttgaatct
aagattatcgaagccaaatatttgaaagcacaagatattcctattggcacattactctcc
aatgttgaaattttgaaagttttggaaggtggtgccggtatcaatgttaaagtttttgat
gactttaaaggatttgttccaagcaaccaaatgtctgacatcaagcttgtttatccagaa
agaaaatttagagttggttccaaagtcaagggtagattattggacatcaagggtaaacgt
atatatatcactttgagaaagtctttggtaaatttggaagatgatgaaattttgtctcgt
tttgatcaagctgaaattggattcaaaaccaatgccattgttgaaaagtttgttcctaat
ggttgtattgttaaattctttggcaatttgagagctttcttgccaaaaactgaaatttct
gaaacttttgttgataatgctagtaactatttgaaattaggacaaattgttaaagtcaga
gttttggacatcaacaaagatgaagaaagactaattgttactttgaaacaatcaagtgaa
ctttctaatgcacaaaagaatgaaattagtaaattagaatccggtaaatcagttgttaac
gctgtcatcgtcgaaaagactaaggattccattttagttgaattggaagaatcaaacttg
agaggtgttgttgctgacggtcaactatctgatggtaattacgaacaaaacagatctctt
gccaagaaattgaaggtcggcgaaaagttagaagtattaattttagacaaagacttgaaa
gcaagaaccgttattgcaactgctaaaccatctttaattgaagctgctaaaggtaaaagt
ttcccaactgatttcaatgatattcaaatcaataaagttgtaaaaggttatatcaaatct
gtcaccaacttgggtttatttgtcacttttactggtagattaaccggtttggttttggct
aaatatgttaccaagaatggcaaggaagatttgaccaagaaattttacaaataccaatct
gttacttgtcgtgtcattagtattgatcaagaaaatgaaagattcttgttaactttggga
tcaggtggtgccaacggtaatgaagatgaagagttggtcaatccagtcgataagtcaaag
aagattgtagctgattacactccaggtgtttctaccaaagctttaatcaaagccatcaag
ggtactcaattgaatgtccaattagctgataatcttcaaggtagagttgacatcactcaa
tgtttcaattccatcaaggatatcaagaatgaacaacagccactagctgctaatttcaat
aaaggtgacttgcttgatgttaaagttattggtactcatgatgccaaaaatcacaccttt
ttgccaatcactcatcgtaaatctaatagaaccactattttggaattatcattgaacgat
cataaagttaataacaagcccttgagtgaattgaaactcgaggatgttaaagttggagat
aaattattaggtttcgtcaataatattgctaaaggtttagtttgggtttctatttctcca
tctcttaaaggtagagtttccttccttgatttgactaatgatggatctattttccaagac
attgacaataaattaccaattggaagcgctatcaaagtcactgttaaacaagttgatttg
gaacacaagacattatcattaacaactagagacaaatttgttgaaaaatttgacgatgtt
gtcaagggagaaacatatcctgctagagttcttaagatcaaaccaaaccatgttttagtg
gaattgggtcctgatgttattgcttcatcatttattactgatgctttggaaaattattct
gataaattagatcatgtttatgaacaaaacgattatgtttccgctagagtattggatatt
gatgaagataacaaacgtatttctgtttctttaagagatgacgcagaggctgcagataaa
gttattaactctgtttctgatttggaacgtggtcatgttatcaaaggttttattaagaat
attgctaataatggtgtttacgtttccttgggtagatcaattcatgctttggttagagtt
tctgatttatctgattcctatttgaaagactggaagaaattcttcaaaccaaaccaaatg
gttattggtaaaattgttaattgtaaagaagaaggtagagttttgatgactttgaaagaa
agtgaagttaatggtgaattgaaattaatgaaaagttttgatgatttatctgttggcgat
attttcgaaggtactgttacttcgaccactgatttcggtgtgtttgttaaattggatggt
actgttaatgtcagtgggttatgtcatcattcagaaatttcagaaaacgatgttgaaaat
gttaaaatgttatttggagatggtgatagagttaaagtcaagatcttgaagattgattca
gaaaagaagcaattgtcattgggtatgaaagcatcttattttgccgaagatggcgacaac
catggtgttgaccaagaagaatccgatgacgacgacgaccaagaagaagagcaagacatt
gaaatggaagatgcagaagataaagaagattctgaagacgaagaagatgatattatggat
gttgaccaagaagaatctgacaacgaagatgaatctgatgcagaagatgacgacgaagaa
gaatctgataacaagtctttgtctactggtttatcaaccaatgggtttgattggactgca
tctattttagatcaagctgaaaatgatgatgattcatcagacgatgatgatgacgaagcc
gactttggtggtaaatctaagaagaaagccaacaaaaagaagaaatcacaagttacagtt
gaagataagactggtgatttgaataccagagccccacaatctgttagtgattttgaaaga
ttattgattggaaatccaaactcttctattttatggatgaactacatgtcattccaatta
caattgagtgaaattgaaaaagcccgtgaaattggtcaaagagctttgaaaactattaac
tatcgtgaagaacaagagaaattaaacatctggattgccatgttgaatttagaaaataca
tttggtacagatgaaacattggaggacgttttcaagaaggctgttcaatatatggatgca
tttgttattcatcaaaaattggttaatatttatatcatttctgagaaattcgatcaagcc
attgaattatttaaagtaatgacaaagaaatttggtaagaacattagtacatgggttatg
tatggatctttcttgttggatcaaaaattgaatgatgaagtccatgaagttttaagcaaa
gccttgagtatattaccaaagagagatcatattgaattagtcaagaaatttgcccaattg
gaattccaaaagggagatccagaacaaggtagatcattatttgaaggtttaattgctgat
gcaccaaagagaattgatttgtggaatatttacattgatcaagaaatcaaacaagataaa
gaagaagatgaaagtagtaaaggtaaagttgaagaattgtttgaaagagtgttaactaaa
aaaattactagaaaacaagccaaattcttctttaataaatggttgaattttgaagaagac
aaagaagatgaaagcatgattgctagagtcaaggctaaagcagccgaatatgttcaaaac
aatagttaa
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integrated database retrieval system