Candida tropicalis: CTRG_01416
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Entry
CTRG_01416 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
ctp
Candida tropicalis
Pathway
ctp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CTRG_01416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_01416
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CTRG_01416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Holin_BhlA
DUF465
Motif
Other DBs
NCBI-GeneID:
8296477
NCBI-ProteinID:
XP_002547110
UniProt:
C5M6D5
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MLARSWITEFNRITEKRLKRSLIPTNNKDDEDVERQLQYWLRWLELEKQNKLELKDESLN
DKRIQYVYKQATYALPFVPEIWFQYVKYLLFQNEEGNLQESISTLRDGGLLLNPKSMLLS
FQLAEMYERDNSFDNAKDVFNKLINSLTKEYNVIASQLNELHEKTKPKTQDCDEEDDDDN
VDDDNNNNNGKNVDMNGGGSKITAQVYRISLADSKQMISLEKEQKRLADAITLSYIKLMT
ACKRVEGIKEARNVFKQARKFEKIGYQLFVENALIEHYSDKKATALKIFDLGKKNFQTNG
KFLLDYLDYLILINDVDTMRTLIQSSDANFSKEISSLQEELQLTDIDPLTRKKKEREVRN
KQKSLKLLFQKYISFASNFLSLDITHSFAKKCEQLFPNDDPADLFTDRYKLDNVNIIKKD
ELGRGDALDIDDEELARLKRRKLSNFNEEESKSAVKSIQDSKNMIEEEEETKVNEEEQIV
GPSIVALMSALPNASYFGLPSESVFNSDKLVTLFSNLSNIPS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctagatcttggattactgaattcaatagaattacagaaaagagattaaagaga
agtttaattcctacaaacaataaggatgacgaagatgtcgaaagacagttgcagtattgg
ctcagatggttagaattagaaaaacaaaataaactagaattaaaagatgaatctctcaat
gataaacgtatacagtatgtttataaacaagcaacgtacgctctaccttttgttccagaa
atttggtttcaatacgtcaagtatttattgtttcagaacgaggaaggaaacttacaagag
agtatttctacattaagagatggtggattattattgaatcctaaaagtatgcttctttct
ttccaattagctgagatgtatgaaagagataattcatttgataatgcaaaagacgtcttt
aataaacttattaattcgttaaccaaagaatacaatgtgattgcatctcaactcaatgaa
cttcacgagaaaacaaaaccaaaaacccaggattgtgatgaagaagacgatgatgataat
gtggatgatgataataataataataatgggaaaaatgtagatatgaatggtggtgggtca
aaaataactgcacaagtttatagaatttcacttgcagattccaagcaaatgatttcattg
gagaaagaacaaaagagattagctgatgcaatcactctttcatacataaaattaatgact
gcttgtaaacgagtagaagggatcaaagaagcaagaaatgtattcaaacaggcaagaaaa
tttgaaaaaattggatatcaattatttgtggagaatgcacttattgaacattattcagat
aagaaagcaacagcattaaagatatttgatttgggtaagaaaaatttccaaacaaatgga
aaattcctattggattatttagattatttgattttaattaatgatgttgatacaatgaga
acgttgattcaatcatcagatgctaatttttccaaagagataagttcattacaagaagaa
ttacaattgacagatattgatccattaacaagaaagaaaaaagaaagagaagttagaaat
aaacagaaatcattaaagttattatttcagaaatacatttcgtttgcttctaatttcctt
tcattggatataactcatagttttgctaagaaatgtgaacaattatttccaaatgatgat
cctgctgatttgtttactgatagatataaattggacaatgttaatattattaaaaaagat
gaattgggtcgtggtgatgctcttgatattgatgatgaagaattagccagattgaaaaga
cgtaaattatcaaatttcaatgaggaagaatctaaatctgcagttaaaagtattcaagat
tcaaagaatatgattgaagaagaagaagaaactaaagtgaatgaagaggaacagattgtt
ggaccatctattgttgctttaatgtcggcattaccaaatgcttcatattttggattacct
tcagaaagtgtcttcaatagtgataaattagtcacattgttttccaatttatcaaatatt
cccctgtag
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