Candida tropicalis: CTRG_01540
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Entry
CTRG_01540 CDS
T01115
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
ctp
Candida tropicalis
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctp03016
]
CTRG_01540
Enzymes [BR:
ctp01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CTRG_01540
Transfer RNA biogenesis [BR:
ctp03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
CTRG_01540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
8300754
NCBI-ProteinID:
XP_002547234
UniProt:
C5M6Q9
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MSNEIESVKPIILPLVYCDSEPEVLIFNIDDIKKLRNDYNILGLLTGTLQQYPQQNIFLS
VPLKLVIWEVLWLVKNKKALLVDQKKYRNARVTSSIDNKNYSGNLISTSNSEESSDIELA
KQYQVPIPEYITKYLSSSSLTIDTFIKYNKYYNYLQNQGYFINPGLKFGGDLVIYPGDPL
RYHSYSIVKFEFADVHEIVVGGRLATSVKKNLVLIGEREPSDKKHNTVNDEVIEELFQES
QPLTFSIEWAGFG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgaaatagaatcagtcaaaccaataatcctacccctagtttactgtgactcg
gagccagaagtcctcatattcaacatcgacgatatcaagaaattgagaaacgactacaac
attcttggtctactcacaggtacattacaacaatatccacaacaaaacatattcctttct
gttccattgaaacttgtcatttgggaagtgttatggttagttaaaaacaagaaagccctt
ttggttgatcaaaagaaatacagaaatgccagggttaccagtagtatagataacaagaac
tattcaggaaatttgatctctacatctaattctgaagaatcatctgatattgaattggct
aaacagtaccaagttcctattcccgaatatatcacgaaatacttgtccctgtctagtttg
acaattgatacgttcataaaatataacaaatattataactacctacaaaatcagggatat
ttcatcaatcctgggttgaaatttggtggtgatttagtcatatatcctggtgatccattg
cgttaccactcttattctatagtgaaatttgagtttgctgatgtgcacgaaattgttgtt
ggtggaaggttagcaaccagtgtcaagaagaatttggttttgataggcgaacgagaacct
tctgataagaaacacaatacagttaatgatgaagttatagaggagctctttcaagagtcg
caaccattgacattctctatagaatgggcgggttttggttag
DBGET
integrated database retrieval system
