Candida tropicalis: CTRG_01561
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Entry
CTRG_01561 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
ctp
Candida tropicalis
Pathway
ctp03082
ATP-dependent chromatin remodeling
ctp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CTRG_01561
03083 Polycomb repressive complex
CTRG_01561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctp03036
]
CTRG_01561
Chromosome and associated proteins [BR:
ctp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
CTRG_01561
Histone modification proteins
HAT complexes
HATB complex
CTRG_01561
HDAC complexes
Sin3A-HDAC complex
CTRG_01561
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
CTRG_01561
PRC2.2
CTRG_01561
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
CTRG_01561
Heterochromatin formation proteins
Other heterochromatin formation proteins
CTRG_01561
Chromatin remodeling factors
NuRD complex
CTRG_01561
NuRF complex
CTRG_01561
NuRF complex (fruit fly)
CTRG_01561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40_CDC20-Fz
WDR55
WD40
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
MIOS_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_EML
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
8300776
NCBI-ProteinID:
XP_002547255
UniProt:
C5M6T0
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MSPTQEQNNDIEISDSKCTDNPEQQTMSEDTEMNQVTEAEEPKEETDASLIDEQTERNYR
VWKKNTPLLYDYLMTNTLLWPSLTVQFFPDITHVQGGGNNNANNKEENETIAQRVLLGTF
TLGQAIDHVSILQLTSFKDLNKSIKISKLDYNPDKEELELSTSSINKTKILQKINHIGDV
NRARYMPQKPNIIASANNLGDLVIYERTRHKSFRNTMLDDTEMSQVQVKLCNKYIPSSAD
IFAIDWNQNKEGLLLSADMNGIINEYDLSKYESQTLHETRYWENNAIGVNDIEWFPTHDS
LFATADDAGSIKVYDIRADNSIVYNKNIGNNVNSIAINPGYATGLASGDSQGTIKTWDLR
NFDAPVGEIRNHTDSITQLKWHPKYHNVLGSSSTDHSVKLHNVANNSTIFSHLGHMLGVN
DFDWSFADDWMVASVSDDNSLHIWKPTHTVTNQFK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctactcaagaacagaataacgatattgaaatttcagactcgaaatgtactgat
aatccagaacaacagactatgtcagaggatacagagatgaaccaggtgacagaggcagag
gaaccaaaagaagaaactgatgcctcccttattgatgaacaaacggaaagaaattatcgt
gtttggaagaagaacactcctcttttatatgattatttgatgacaaacacattgctttgg
ccctcattgacagttcagtttttccctgacattacccatgtccaaggtggagggaataac
aatgctaataataaggaagaaaatgaaacaatagctcaaagagtgcttcttggaacattc
acattaggacaagcaattgatcatgttagcattttacaacttacgagtttcaaagatctt
aacaagagcataaagatcagcaaactagattacaatcctgataaggaagaattagaatta
tccacatcttctattaacaagaccaaaatcttacagaaaataaaccatatcggagacgtc
aatagagccagatatatgcctcaaaaaccaaacataattgctagtgcaaacaatttaggg
gacttggtcatatacgaaagaactagacataaaagttttaggaatacaatgctagatgat
acagaaatgagtcaagtacaagtgaaattgtgcaacaagtatattccatcctccgctgat
atttttgcaattgattggaatcaaaacaaggaaggtctattattaagtgctgatatgaat
gggataatcaacgaatatgatttatccaaatatgaatctcaaacattgcatgaaacaaga
tattgggagaataatgccattggagtcaatgatatagaatggtttcctacacatgactct
ttatttgcaactgccgatgatgctggaagtataaaggtatacgatatccgagctgacaat
tctattgtatacaacaagaacataggtaacaacgtcaacagtattgcgatcaatcctggg
tatgctactggattggcttctggagatagtcaaggaacaattaaaacttgggatcttcga
aattttgatgctccagtaggtgaaatcagaaatcatactgattcaataacgcaattgaaa
tggcatcctaagtaccataatgttctaggttcatcgtctacagatcatctggttaagtta
cacaacgttgctaacaactcaactatattctcacacttgggtcatatgttgggagtaaat
gattttgactggtcatttgcagatgattggatggttgcaagtgtatccgatgataattcg
ttacatatttggaagccaactcatactgtaacaaatcaatttaaatag
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