Candida tropicalis: CTRG_01632
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Entry
CTRG_01632 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K12879
THO complex subunit 2
Organism
ctp
Candida tropicalis
Pathway
ctp03013
Nucleocytoplasmic transport
ctp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CTRG_01632
09122 Translation
03013 Nucleocytoplasmic transport
CTRG_01632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_01632
03041 Spliceosome [BR:
ctp03041
]
CTRG_01632
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CTRG_01632
Spliceosome [BR:
ctp03041
]
Complex C
Other components
EJC/TREX
CTRG_01632
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CTRG_01632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
8301282
NCBI-ProteinID:
XP_002547326
UniProt:
C5M701
LinkDB
All DBs
Position
Unknown
AA seq
1552 aa
AA seq
DB search
MSFTYFSDEVIESFGGSGIDPLFEVIESYQESDPESEEALAVLFTELLLVFDEGQLDVND
VKKFLSQGIKSDDHARIFFQVLNSFAVSKNLRDLIHLLFRDNKIKPETLALHLHSDFIKE
VEIVQKDYLNKSISHSVRDQSLTQKKFNLLHEEVEGYSKFVAEIFAIFREQDTEFKIDYA
LQIVDKLIGHYDLDPNRCLEILLEIFGGSVVSSYRSILKFLKKSRWWPREPSDCSSLLKL
SNGGSATAAKIIGMKIKASASRELGETSKMLFAILIKEGFVSFGSVYKYLAPDDEKMKKL
EEEHKKKMDRDVLIAGANALALAAPLADDEDEDSNSKTKKKTTADQKTEKNEIKSLLAGN
TKYQFLKVFLTLGLYWPSIFILTEYPYLAQIDETIPVLINRMFAATIEPLYKEGRILTNE
EVHNMHESKGIAFSRSHNSVNIEHSPLQYLLTFKAPVKDFAGKRFKFFYEEWTHQLPKVQ
DIDSLIQVSKELLIFNGPNLAQSTIIFNKLCEVIQTLMTKEEDKPKIYSYFRNFIFPAMP
LIEENSIAIDKAYEILGKYPIEDRFSLYGELYLVLAKNNPLIKIAYSKAEKSTKDVLKRL
SKENVRPMMRRLAKISVSNPLPCLLTILQQIESYDNLNTLVVETARYFNAYGWDNLTAAI
LMRLASTRSSTYNGMSERQWAQSLASFIGKICQRYPRAIDIKTILLYILKSFHSGETIGL
LVLKEMFISMGGIQTITNLTLNQIDLINCGSSLQKIVYNTIDDLRFERQYTGKYLIKCLG
ELDAINELLILLCRISSQLTFTGDEEYLKVLVSKSDDLNSVIRLFVTLISLYGSELNLMS
VKELYDLGVPLPWAFEVWRAKGEIQMDQLPEEIQSSLFNNFWKLSLHDINYSDDLYEQET
SKLESNIKSLTDSIALNIKNKEVSRATIDKQRKELDFSKEYEKSLPQERDSHKEENKMVS
KQLEEVSADWFENLKVEDFIQQCIFQRTASSSFDAVYSARFIFKLHFLKTKNYSLVNVLN
LLFKSRILFGTLFTSTPTEAENIGLFFADILKILQGWTNEDKYSEVELKDKDGDTISFDD
FRQLLFEYHSVILEEVKIGLQVTEYISRNNTITFLKNLLGVYPVVVEHCEKVVKLIEYLA
STEERNDLKLASNALLVHIKSRSKEWIPTWDFILMSEEDKQKLIAAKEEIKRRAALRIAK
EKQAKLKKLKEERLAKEEQERLAKEEEEEERKRKLLASTAMNYDSGASGTRVASRGSTIE
RSSYEKYAQANDNKQETTKSGTANASLDKQTPAPSDSKVDDKQSKDTTSTTSDSASKESL
QTKLNEMKKAYNEMKSTDDDKKDNHQTSKTEESTTKKDVETRDERSSTDTNGSPDKPNEN
VSRRRTPLPPQEAIIKASNKDITKENGETKRSPLPPQNEIKGGRSSFTSARQPLPPQDRV
VRGNVQQGRFDSRSGRGGVSSLPLPPPSPPPPPPPPPPKQQLSRRGAGGRGDNYGRDIGS
RPSKLRAPTYDNRQRGSGPNGGRDHRGNNGRSDNKRKGDGFGGRGYDKRSRY
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacatattttagtgatgaagtgattgaaagttttggagggagtggaatagat
ccactttttgaagttattgaatcatatcaagaatcagacccagagtcagaggaagctctt
gctgtattatttacagagttacttcttgtatttgacgagggccaattagatgtcaatgat
gtaaagaaatttttatcccaaggtatcaagtcagatgatcatgctagaattttcttccaa
gtgctcaattcatttgcagtttcgaaaaatttacgagacctcatacacttgttattccga
gacaataagatcaaacctgaaactttggcgttacatcttcattcagattttataaaagag
gtggaaattgtacaaaaggattatttaaataagctgatatctcatagtgttagagatcaa
tctcttacccaaaagaaattcaatttgctccatgaagaagttgaaggttattccaaattc
gttgccgagatatttgcaatttttagagaacaggatactgaatttaaaatagattatgct
ttacaaattgttgataaattaattggtcattatgatttggatcctaatagatgtttagag
attttattagagattttcgggggatcagttgtttctagctatcgaagtattttgaaattt
cttaaaaaaagtaggtggtggccaagagaaccaagtgattgttcttcattattgaaattg
tccaatggtgggagtgcaaccgccgctaaaattattggtatgaagataaaggcttccgct
tctcgtgagttaggcgaaacaagtaaaatgttgtttgcaattttaatcaaggaaggattc
gttagttttggatcagtgtacaagtatttagctcctgatgacgagaaaatgaaaaagcta
gaggaagaacataagaaaaagatggatcgtgatgttctaattgcaggagcaaacgcgctt
gcacttgccgctccacttgcagacgacgaggatgaagattcgaattcaaagactaaaaag
aaaaccaccgcggaccagaaaactgaaaagaatgaaataaaatctttactagcaggtaat
acaaagtatcagtttttaaaggttttcctcacacttggactttattggccatcaatattc
atactcacagaatatccttatttggcacaaattgatgagaccataccggtgttaatcaat
agaatgtttgcagcaactattgaaccattgtataaagagggaagaatcttaaccaatgaa
gaggtacacaacatgcatgagtcaaaggggattgcattcagtcgttcacataactccgtc
aatattgaacattcacctttacagtacctcttgacatttaaggctccggttaaagatttt
gctggtaaaagattcaagtttttctatgaggagtggacacatcaactcccgaaagtccaa
gacattgactctttaattcaagtttccaaagagttattaattttcaatggtcctaattta
gcgcaaagtactattattttcaataagctttgtgaggttattcaaacattgatgaccaaa
gaagaagacaaaccaaaaatttattcctattttagaaacttcattttcccagcaatgcca
ttgattgaagaaaattcaattgccattgataaagcatatgaaatattaggaaagtatcca
atcgaagatagatttagtttatatggtgaactttacctcgtactcgccaaaaataaccca
ttgattaaaatagcatacagtaaagcagagaaatcaacgaaagatgttttaaagagattg
tctaaagaaaacgtcagaccaatgatgagaaggttggcaaaaatcagtgtttcaaacccg
ttgccttgtttattgaccatcttacaacaaattgaaagttatgataacttgaatactttg
gtcgttgaaacggcaagatattttaatgcgtatggttgggataatttgactgcggccata
ttgatgagacttgcgtctactagaagcagtacttataatggtatgtctgaacgtcaatgg
gcgcaatcattagcttcatttattggtaaaatatgccaacgttatccacgtgccatagat
ataaagacaatattgttatacatcttgaaatcattccattctggtgaaactatcggttta
ttggtgcttaaagaaatgtttatttccatgggaggtatccaaactatcaccaacttaacc
ttaaaccaaattgatttgatcaattgtggctcttctttgcaaaaaatcgtttacaatact
attgatgatttaagatttgaaagacaatataccgggaagtatcttataaagtgtttgggt
gaactagatgctatcaatgaattgcttattttgctttgtcgaatttccagtcaattaacg
tttactggtgatgaagagtatttaaaagttttggtgagcaaaagcgatgatttaaattct
gttattagattatttgtcactttgataagcttatatggcctggaattaaatttgatgtca
gtaaaggaattgtatgatttgggagttcctttgccatgggcatttgaggtttggagagct
aaaggagaaatacaaatggaccaattaccagaggagatccaaagctctttgtttaacaac
ttttggaaattatccttgcatgacatcaactattctgatgatctttacgaacaagagact
ctgaaattggaatcaaatatcaagagtttaactgattcaattgcactcaatatcaaaaac
aaggaagtgtcacgtgcaacaattgacaaacaaagaaaggaattggatttcagtaaagaa
tacgaaaaaagtttaccacaagaacgtgattcacacaaggaagaaaataagatggtcagc
aaacaattggaagaagtttctgctgattggtttgaaaacttaaaagtcgaagatttcatt
caacaatgtattttccaaagaactgccagttcatcatttgatgctgtttattctgctaga
tttatattcaaattgcatttcttaaagacaaagaattattcattggtaaatgtcttgaat
ttgttatttaaatcaagaattttgtttggtacattgtttacttctacaccaactgaagct
gaaaacattggattgttttttgccgatattttaaagattttacaaggttggacaaacgaa
gataagtattctgaagttgaattgaaagacaaagatggcgatacaatatcatttgacgac
tttagacaattgctttttgaatatcattctgtaattttggaagaagtaaaaattgggttg
caagtcaccgagtatatatcccgtaataacaccattacatttttgaagaacttattggga
gtttatcctgttgtggtcgaacattgtgaaaaagtggtgaaattgattgaatatttagct
tctacagaagagagaaacgatttgaaattagcatcaaacgcattgttggtccatatcaag
tcaagatccaaggagtggattccaacttgggatttcatattaatgagtgaagaggataag
caaaaattaattgctgctaaagaggaaattaaaagacgtgctgctcttaggatagccaag
gagaaacaagctaaattaaagaaattaaaagaagaacgattagctaaagaagaacaagaa
aggttggctaaagaggaagaagaagaagagaggaaacgtaaattacttgcttcaacggcc
atgaactatgattcaggtgcaagtggtacaagagttgctagtcgaggttcaactattgaa
agatcatcttatgagaaatatgcacaagccaatgataataaacaggaaactactaaatca
gggactgccaatgcctcattagacaaacaaactccagctcctagtgattcaaaggttgat
gacaaacagtcaaaagatactactagtacaacaagtgattcagcttccaaggagtcttta
caaacaaaactcaatgaaatgaagaaagcatataatgaaatgaaatcaacagatgacgat
aaaaaggataaccatcaaacttcgaagaccgaagagtccacaacaaagaaagacgttgaa
acgcgcgatgagagatcttcaaccgataccaatggttcaccagataaaccaaatgagaat
gtttctagaagacgcacaccattgccacctcaggaggcgattattaaagcttcaaataaa
gatatcacaaaggaaaatggagaaaccaaacgttctccattgcctccacagaatgaaata
aagggtggccgttcaagtttcacttctgcaagacaaccattgcctccacaagatagagtg
gttagaggaaatgtacaacaaggaagatttgattcaagatcaggtagaggtggtgtatca
ctgttaccccttcctccaccttcacctccgccaccaccaccacctcctccaccaaagcag
cagctttctagaagaggtgccgggggaagaggcgacaattatggacgtgatattggttct
agaccttctaaactccgtgctccaacatatgacaatagacaaagaggatcaggaccaaat
gggggacgtgaccatagaggtaataacggtagatctgataacaaaagaaaaggtgatggg
tttggtggtagaggttacgataagaggtctagatattaa
DBGET
integrated database retrieval system
