Candida tropicalis: CTRG_01797
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Entry
CTRG_01797 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
ctp
Candida tropicalis
Pathway
ctp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTRG_01797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_01797
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CTRG_01797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
8300460
NCBI-ProteinID:
XP_002547490
UniProt:
C5M7G5
LinkDB
All DBs
Position
Unknown
AA seq
225 aa
AA seq
DB search
MSSMSVELRTSILENADGSAELTIGGTKVITSISGPIEPKQRQELPNQSSLEIIVRPATG
LPTTREKLIEDKLRSVLQSVIISYKYPRQLIQVVVQFCNTDESVEFNVNELNAAINSCYF
ALIDADVALYSSFASVVISINSGNLIKEPTGDVLETSDSFHLVCFTIQDAQAKKLLMLES
QGEFTEQELFTVLSESVHEVENLHTIQRKFIEDKINQDYIWKRSE
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaatgtcagtagaacttaggacttctatactagagaatgctgatggatcagca
gaattaactattggtggaaccaaagtaataacatctatttctggaccgatagaaccaaaa
caacgtcaagaattaccaaatcaatcaagtttagaaataattgtacgtccagcaactgga
ttaccaacaactagagaaaaattgattgaagataaattacgttcagttttacaatcagtt
attataagttataaatatcctagacaattaattcaagttgtggtacaattttgtaatact
gatgaatctgtggaatttaatgttaatgaattaaatgcagctataaattcttgttatttt
gcattgattgatgctgatgtggcattatatagttcttttgctagtgtggttatatctata
aatctgggtaatttgattaaagaaccaacaggagatgttttggaaactagcgattctttc
catttagtgtgtttcacaatacaagatgctcaagccaagaagttgttaatgttggaaagt
caaggtgagtttacagaacaagagttgtttactgtgttgagtgaaagtgttcatgaagtt
gagaatttgcatactattcaaagaaaattcattgaagataaaatcaatcaagattacata
tggaaaagactggaataa
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