Candida tropicalis: CTRG_01858
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Entry
CTRG_01858 CDS
T01115
Name
(RefSeq) squalene synthetase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ctp
Candida tropicalis
Pathway
ctp00100
Steroid biosynthesis
ctp00909
Sesquiterpenoid and triterpenoid biosynthesis
ctp01100
Metabolic pathways
ctp01110
Biosynthesis of secondary metabolites
Module
ctp_M00102
Ergocalciferol biosynthesis, FPP => ergosterol/ergocalciferol
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
CTRG_01858
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
CTRG_01858
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ctp01006
]
CTRG_01858
Enzymes [BR:
ctp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
CTRG_01858
Prenyltransferases [BR:
ctp01006
]
Terpene biosynthesis
Squalene/phytoene synthase
CTRG_01858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
8300122
NCBI-ProteinID:
XP_002547551
UniProt:
C5M7M6
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MGKLFQLLAHPTEFVAAVKILGFRQTLHPQKIDPNDTDLIRCYELLKLTSRSFAAVIKEL
HPDLRDAIMIFYLVLRALDTIEDDMSIKPAVKVPLLRSFDDKLDTEDWTFDGNGPNEKDR
AVLVEFDKILRVYHRFKPEYQAIIKDITKKMGNGMADYILDENFNVNGVVTVKDYDLYCH
YVAGLVGEGLTEFLVLVKFGDQSLSANNFEKAESMGLFLQKTNIIRDYHEDLEDGRSFWP
KEIWGKYTDKLPAFHNDPAKEFDGVSCINELVLNALNHVTDCLEYLSLVKDPSSFSFCAI
PQVMAVATLAEVYNNPKVLHGVVKIRKGTTCKLILQSRTFPGVVEIFKHYIQVINHKSHP
RDPNYLKIGIKCGQIEQCCEMLYPNKDALPSTMTTVPENKYSKTIAAREKVDNSIQRIIE
QEDFNFNVVFFSISVLIAGLIYFIRN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaattatttcaattgttagctcatccaactgaatttgttgctgccgtaaagata
ttgggattcagacaaactttacatccacagaaaatagacccaaatgatactgacttgata
agatgttatgaattgttaaaattaacttcaagatcattcgctgctgttattaaagaatta
catcctgatttgcgtgatgctatcatgattttctaccttgttttgagagcattggatact
attgaagatgatatgtctattaaaccagcagtcaaagttccattattgagatcatttgat
gataaattagatactgaagattggacatttgatggaaatggtccaaatgaaaaggataga
gctgttttggttgaatttgacaagattttacgtgtatatcacagatttaaaccagaatac
caagctatcatcaaagacatcaccaagaaaatgggtaatggtatggccgattatatcttg
gatgaaaatttcaatgtcaacggtgttgttactgttaaggactatgatttgtactgtcat
tatgttgctggtttagttggtgaaggattaactgaatttttggttttagttaaatttggt
gatcaatctttaagcgcaaacaattttgaaaaagctgaatccatgggattattcttacaa
aaaaccaatattatcagagattatcatgaggatttggaagatggaagaagcttctggcca
aaagaaatatggggtaaatatactgataaattgccagctttccacaatgacccagcaaaa
gaatttgatggtgtgagctgtattaatgaattggttttaaatgcattaaatcatgtcact
gattgtcttgaatatttgtctttggttaaagacccatctagtttctcattctgtgctatt
ccacaagtaatggccgttgccactttagctgaagtttacaataatccaaaagttttacat
ggagttgttaaaatcagaaagggaaccacttgtaaattgattttacaaagtagaactttc
ccaggagttgttgaaatctttaaacattacattcaagtcatcaaccataagtcacaccca
agggatccaaactatttgaagattggtattaaatgtggtcaaattgaacaatgctgtgaa
atgttgtatccaaacaaggatgctttaccatcaactatgaccactgttccggaaaataaa
tattccaaaactattgctgctagagaaaaagttgacaactctatacagagaattattgaa
caagaagacttcaactttaatgttgtattctttagtatcagtgtattaattgctggtttg
atttacttcatccgtaattga
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