Candida tropicalis: CTRG_02020
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Entry
CTRG_02020 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ctp
Candida tropicalis
Pathway
ctp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CTRG_02020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctp03400
]
CTRG_02020
DNA repair and recombination proteins [BR:
ctp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
CTRG_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ZGRF1-like_N
ERCC3_RAD25_C
AflR
Motif
Other DBs
NCBI-GeneID:
8296376
NCBI-ProteinID:
XP_002547713
UniProt:
C5M542
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MNNRPNAPFKAPRLMKNTGQSVVRPVLSVNKPTIKRSYSRPTVGSNAATTNPPIKKSRPS
TPNGSNIEKYIIQWRKKTTKKNKTWDGDGHATIHHLENGGCEIFAKNSDNKSLGKRSFNV
SPNFEEVISLGTFEIELDEKVSGSQESQEEAPRKPVLKRVSPVPTTTENATNQFKKVAPP
TYVERPTSRKAMYDDNPSAISLPPPPGTSNFVKVNIDPLLATKLRHHQIEGVTFMYECLM
GYRDFQGHGCLLADEMGLGKTLMTITTIWTLLKQNPFPEQKKPVINKVLVVCPATLISNW
RQEFKKWLGANKLNVLTLNNAMSDEKRDILNFGKLNVYQVLVVNYEKITIHYEELSTIKF
DLLVCDEGHRLKNSANKVLNHLIKLNIPKKIVLTGTPIQNELIEFHTLISFLNPGVLPEL
KTFQRNYVNPISRARDVNCFDPEVKRRGEEISQQLIGLTSQFILRRTQSILSKYLTTKTD
ILLFVPPSDLQVKLFKYITNLKKFNQINSGSDSFTLINLFKKICNSPSLLIDDAFFKRIV
EEKFHLTLSSGKINVLIPLLLEIVAQKEKIVLISNYTQTLDLLEKVLSKINLTFSRLDGS
TATNIRSKIVKQFNSNPNIHVFLLSSKSGGMGINLVGASRLILFDNDWNPATDLQSMSRI
HRDGQTKPCFIYRIFTTGCIDEKIFQRQLVKNRLSSKFLDNDSSSKSDIFDESDLKNIFE
VDTNTISNTHDLLECSCDGDGSTLNEQLSQSQEKSGNEQEEPPFATQSWVSALELQKKMV
DNGDILKKSAVKSALSDYQHYNPNVNKNLTFDTVLDRLANNPSFRDKKLPITFIMSRISN
QDQPNTE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcgacctaatgcaccatttaaagcgccgaggttgatgaaaaatactggccaa
tcagtagtcagaccagtattatcagtgaataaaccaactattaaaagatcatattctcga
ccaactgttggatcaaatgctgcaaccacaaatcctcctataaagaaatccagaccatca
acacccaatggatccaatatagaaaaatatatcattcaatggagaaagaaaactacaaaa
aagaataaaacttgggatggagatggccatgctactattcatcaccttgaaaatggtgga
tgtgagatatttgcaaagaactcagacaataaatccctaggaaaaagatcattcaatgtt
ctgccaaatttcgaagaagtgataagtttaggaacttttgaaattgaattagatgaaaaa
gtatctgggtctcaagaatcacaggaagaagcgcctcgaaagccagttttaaaacgcgtg
tctccagtaccgactactactgagaatgcaaccaatcagttcaaaaaagttgcacctcct
acttatgttgaaagacctacttccagaaaagcaatgtatgatgataatcctagtgcaatt
tcattaccaccacctcctggtacgtcaaattttgtcaaggtaaatatagacccacttttg
gcaacaaaattgcgacaccatcaaattgaaggagtgacgtttatgtatgaatgtcttatg
ggatatcgtgatttccagggacatggatgcttgttagctgatgaaatggggttagggaaa
actctaatgacaattactactatttggactttacttaaacaaaacccatttcctgaacag
aagaaacctgttatcaataaagttttagttgtatgtcctgcaactcttatttcaaactgg
agacaagagttcaagaaatggttaggtgcaaacaaactaaatgtcctcacattaaacaat
gccatgtcagatgaaaagagagacattttaaatttcggaaaattgaatgtgtatcaggtt
ttggttgtcaattatgaaaaaataactattcattatgaggaattatccactataaagttt
gatttgttggtttgtgatgaaggtcatcggttgaagaatagtgccaataaagtcttaaac
catttaattaaattgaatatcccaaaaaagattgtgttaactggtactcctattcaaaat
gaattgattgagtttcataccttgatatcatttcttaacccgggagttctccctgaatta
aagacttttcaaaggaattacgtgaatccgatatctcgagctcgagatgtaaattgtttt
gatccagaagtgaaacgaagaggggaagaaatctcacaacagttgattggattaaccctg
cagtttatattacgaagaacgcaatctatattgtcaaaatatttaactaccaaaactgat
atcctattatttgttcctcccagtgatttgcaagtcaagttattcaaatatatcactaat
ttgaagaagttcaatcagatcaatagtggttcagattcatttactttaattaatttgttc
aagaaaatttgcaactcgccttctttgttgatagatgacgcatttttcaaaaggattgtt
gaagaaaagtttcatctaactttatcatccggcaaaattaacgttttgatacctttatta
ttagaaattgttgcacaaaaggaaaaaattgttttaatttcaaattatacccaaactttg
gatcttttggagaaggtgttgtcaaagatcaatttaacattttctagattggatggctct
actgctacaaatatcagaagtaaaatcgtgaagcagttcaacagcaacccaaatattcat
gtatttttattgtcatcaaaatcaggtggtatgggaataaatctagtaggtgcatcaaga
ttgattttatttgacaacgattggaatccagcaactgacttacaatccatgtcaagaatc
catagagatggtcaaacgaaaccttgttttatttatagaattttcaccaccggatgtatt
gatgaaaaaatattccaacgtcaattagttaaaaacaggttaagttcaaaatttttagat
aatgattcatcaagtaaatcggatatatttgatgaaagtgatctaaaaaatatatttgag
gttgatacaaacactatttcaaatacacatgatttattagaatgttcatgtgatggtgat
ggatcaacactaaatgaacaattatcccaatctcaagaaaaatcaggtaatgaacaagag
gaaccaccatttgctactcagtcttgggtgtctgcattggagcttcaaaagaaaatggtt
gataatggtgatatcttgaagaaatcagcagttaaatcggcattaagtgattatcaacat
tataatcctaatgtaaacaaaaacttgacttttgataccgttctagatcgtcttgctaat
aatcctagttttcgtgataaaaaattacccattacttttattatgctgagaataagtaat
caagatcaaccaaatacagaataa
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