Candida tropicalis: CTRG_02367
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Entry
CTRG_02367 CDS
T01115
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ctp
Candida tropicalis
Pathway
ctp03013
Nucleocytoplasmic transport
ctp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CTRG_02367
03015 mRNA surveillance pathway
CTRG_02367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_02367
Enzymes [BR:
ctp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CTRG_02367
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CTRG_02367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
8301652
NCBI-ProteinID:
XP_002548070
UniProt:
C5MA55
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MSDDKNKRDALDAADLLASLDLDKGASKKEELTKASEEKPAANPSSNSDEKKEQPKEEPK
EATKDEANDNKPKEHTESNLIKSTYEVKVKLADLQADPNSPLYSVKSFEELGLSPELLKG
LYAMKFNKPSKIQEKALPLLLSNPPKNMIGQSQSGTGKTAAFSLTMLSRVDESIKSPQCL
CLAPTRELARQTLEVITTMGKFTNITTQLVVPDSIARGASVTSQILVGTPGVVNDLMRRK
QINPSKMKVFVLDEADNMLDAQGLGDQCVRVKKLLPKSTQLVLFSATFPTEVRNYAERVV
PNANSLELKQEELNVDGIKQLYMDCDSEKHKFEVLCELYGLLTIGSSIIFVEKKETANQL
YAKMKQEGHTCSILHGGLETADRDRLIDDFREGRSKVLITTNVLARGIDIASVSMVVNYD
LPTDKFGKPDPSTYLHRIGRTGRFGRVGVSISFVHDKRSFEILMAIKNYFGNVEMTRVPT
NDWDEVEKIVKKVIKN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgataaaaacaagagagacgcgttggatgctgctgatttgttagccagtctt
gatttggacaaaggagcaagcaaaaaggaggaacttactaaggcttctgaagaaaaacca
gctgccaacccttcatcaaattctgacgaaaagaaagaacaaccaaaagaggaaccaaaa
gaagctactaaagatgaagctaatgacaacaaaccaaaggaacatactgaatccaatttg
attaaatctacctacgaagtcaaagttaaattggctgatttacaagctgatccaaattct
ccattatactccgtcaagtcatttgaagaattagggttatcaccagaattactaaaaggt
ttatatgccatgaagtttaataaaccatccaaaattcaagaaaaagctttaccattgttg
ctttcaaaccctccaaagaatatgattggtcaatcccaatcaggtactggtaaaacagcc
gcgttttcattaaccatgttatccagagtcgatgaatcaataaaatcacctcaatgttta
tgtttagctccaactagagaattagcaagacaaactttggaggtcataactaccatgggt
aagttcacaaacattactacccagttggttgttccagattctattgccaggggtgcaagt
gttacttcacaaattttagtcggtacaccaggtgttgtcaatgatttgatgagaagaaaa
caaattaatcctagcaagatgaaagtatttgttttggatgaagctgataatatgttagat
gctcaagggttgggtgaccagtgtgttagagtcaaaaaattgttgccaaaatcaactcag
ttggttttgttttctgccaccttcccaacagaggttcgtaactatgctgagagagtggtt
ccaaatgctaattctttggaattaaaacaagaagaattgaatgttgatggtattaaacaa
ttgtacatggattgtgattctgaaaaacataaattcgaagtcttgtgtgaattgtatggt
ttattgactattggttcttctattattttcgttgaaaagaaggaaactgcgaatcaattg
tatgccaagatgaagcaagaaggacatacttgttctattttacatggtggcttggaaact
gctgatagagatagattgatcgatgatttccgtgaaggtagatctaaggtcttgatcact
actaatgttttagctagaggtattgatattgcttctgtttccatggttgtcaattacgat
ttgccaactgacaaattcggtaaaccagacccatcaacttatttgcacagaattggtaga
actggtagatttggtagagttggtgtatctatctcatttgtccatgataaaagatcattt
gagattttgatggctattaagaattattttggtaatgttgaaatgacaagagttccaact
aatgattgggatgaagttgaaaaaattgtcaagaaagtaattaagaattaa
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