Candida tropicalis: CTRG_02549
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Entry
CTRG_02549 CDS
T01115
Name
(RefSeq) structural maintenance of chromosome 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ctp
Candida tropicalis
Pathway
ctp04111
Cell cycle - yeast
ctp04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
CTRG_02549
04113 Meiosis - yeast
CTRG_02549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctp03036
]
CTRG_02549
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ctp00535
]
CTRG_02549
Chromosome and associated proteins [BR:
ctp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
CTRG_02549
Meiosis-specific proteins
Cohesin complex and associated proteins
CTRG_02549
Proteoglycans [BR:
ctp00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
CTRG_02549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
8299146
NCBI-ProteinID:
XP_002548252
UniProt:
C5M827
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MHIKKIIIQGFKTYKNVTTIDLLSPHCNVVVGRNGSGKSNFFAAIRFVLSDAYTHMSREE
RQGLIHEGSGTVMSAYVEIIFDNSDGRFPINKNEISIRRTIGLKKDDYSLDGKSATRSDI
MNLLESAGFSRSNPYYIVPQGRITSLTNSKDHERLNLLKEVSGANVFENKLKESMKEMNQ
SNLKRARIDETLISIEERLKDLQIESTDLKNFQKLDKQKKILEFNIFDREYNELNVSLEE
LEERQQAMKDETKQDLIDLEKREKLCVELQDSIKELKISLKILSLEKEQSDLDCDQLLKL
ITDKEIKLNEFRSTNESSKEQNSYLNEQINHLQLEIQKLKQEISKSKPEMVELQQQESQL
KQQLLETSSKQRALYSKSNRFQQFDTKKSRDDWLNEEISKLKKQLTLKDQDIRHVSSEIK
SRESAIAELSESIDKLNESLIDKEHIQTLAELKTSIADYKSQINQLTDERKSLWRDEIRL
KSVYDSLTNDLTNATNLVNQTMDRAQAQGIAAVKQIAIRLGLNDQVYGTVAELFHVNEKY
KTAAEVIAGNSLFHIVVDTDATAATIMDELVRNKAGRVTFIPLNRIDSLHIDYPDSQENQ
CIPLISKLKYNETVHKAMNQIFGKALVVNELQRGGELSRKFRLSCITLDGDRVDTKGVLS
GGYRDYKNSRIDALKVQTKKRRELEKTQNEMTRVVNEIETTNSQLTKLNNELQLNIRDLD
RISESKEPIKIELSQVTNKKFNLDQELSSLRFNLDSLQNTKNSININLKQHETELNSVFT
QVLTQEEQDELNSLNQEIARLEGELDQVVTRSSELDTKVSQLESELINNYQPKLNKYRQD
QARLGNKSEINLEFENLQQELESLQMQLDTAQSRNTQAGDNYNRVNQELSKCEDELKKAN
AQQLKIIKNIEKFSKQSNILSNQKEIKKQMKDEANQKIRDLGVLPEEAFQSDKYDKFTSN
ELISKLNTVNQGLTKYSHINKKAMEQFNVFNKQRDDLVARRVDLDNSRESIEDLISNLQQ
QKNDAIKKSFQQVAKAFHEVFEKLVPRGTGRLIMQKKDENNDSDDIDNYSGVAISVSFNS
KNDEQQRIEQLSGGQKSLCAIALIFAIQNCDPAPFYLFDEIDSNLDTQYRTSVANLIKSL
SSEAQFICTTFRPELLQLAADKFYGVTFSNKVSSISEINKEEAMSFVEGQQNR
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgcatattaagaaaatcataatacaagggtttaaaacctacaaaaatgtcactacaatt
gatcttctatcaccacattgtaatgtggttgttgggcgtaatggatcaggtaaatcaaat
ttttttgctgccattagatttgtattaagtgatgcttacactcacatgtcaagagaagaa
agacaaggattaattcatgaaggttcaggtacggttatgtcagcttatgttgaaattata
tttgataactcagatggaagatttccaatcaataaaaatgaaattagtattagaagaaca
attggtttgaaaaaagatgattattcgttagatgggaaatcagctactagatcagatatt
atgaatttattagaaagtgctggattttcaagatcaaatccttattatattgtacctcaa
ggaagaatcacaagtttaactaactctaaagatcacgaaagattaaatttattaaaagaa
gttagtggggcaaatgtttttgaaaataaattgaaagaatccatgaaagaaatgaatcaa
tccaatttaaaacgtgctagaatcgatgaaacgttaattagtattgaagaaagattaaaa
gatttacaaattgagagtactgatttgaagaattttcaaaaattggataaacagaaaaag
attttggagtttaatatttttgatcgtgaatacaatgaattgaatgtgtccttggaagaa
ttggaagaaagacaacaagcaatgaaggatgaaactaaacaagatttaatcgatttggaa
aaaagagaaaaattatgtgttgaattgcaagattcaatcaaagaattgaaaatttccttg
aaaatcttgtcattagaaaaagaacaactggatttagattgtgatcaattattaaaactt
ataacagataaagaaatcaaattaaatgaattcagatccactaatgaatcatctaaagaa
caaaatagttaccttaatgaacaaataaatcacttacagttggagattcaaaaacttaaa
caagagatttctaaaagcaaaccggaaatggttgaattacaacaacaagagtcacagttg
aaacaacaattgcttgaaacatcttccaaacaaagagcattatactccaaaagcaataga
ttccaacagtttgatacaaaaaagagtcgtgatgattggttaaatgaggagatttccaaa
ttaaagaaacaattgactttgaaggatcaagatattcgccatgtttctagtgaaatcaaa
agcagagaaagtgctattgctgaattgtctgaatccattgacaaattgaatgaatcattg
attgataaagaacatatacagaccttagctgaattgaagacaagtatagcagattacaaa
tcacagatcaaccaactaacggatgaaagaaaatccttatggcgtgatgaaatcagattg
aaaagtgtttatgattccttgacgaatgatttgaccaatgctactaatttagtgaatcaa
actatggatagagcccaagctcaaggtattgctgctgttaagcaaattgctattcgtttg
ggattgaatgatcaagtttatggtactgtagctgagttgtttcatgtcaatgagaagtac
aagactgctgctgaagttattgcaggtaattcgttattccacattgtagtcgatactgat
gccacagctgcgactataatggatgagttggtaagaaacaaagcaggtagagttacattt
attcctttgaaccgaattgattctctacacattgattatcctgattcacaagaaaaccaa
tgtattccattgattagtaaattgaaatataatgaaacagttcataaagccatgaatcaa
atatttggtaaagctcttgtggtgaatgaattacaaagaggtggtgaattatctagaaag
tttagattgagttgtattactttggatggtgatagagttgatactaaaggggtattatct
ggtggttatcgtgattataagaattctcgaattgatgcattgaaggtacaaaccaagaag
agaagagaattggaaaagactcaaaatgaaatgaccagagttgttaatgaaattgaaact
acaaattcacaattgaccaagttgaacaatgaattacaattgaatattagagatttggat
agaatttctgaatccaaagagcctataaagattgagttatcacaagtaacaaataagaaa
tttaatttagatcaagaattatcatccttaagattcaaccttgatagtttacaaaacacc
aagaactcgataaatatcaatttgaaacaacatgaaacagaattgaatagtgtatttacg
caggtattgacacaagaagaacaagacgaattgaatagcttgaatcaagaaatagctaga
ttagaaggagaattggatcaagtggttacaaggtcatctgagttggatacaaaagtatca
caacttgagagtgagttaattaacaactaccaacctaaattgaataagtatagacaagac
caagctagattgggcaataagctggagatcaatttagaatttgagaatttacaacaagaa
ttggaaagtttacaaatgcaattggatactgcacaatcacgaaacacccaagccggagat
aattataatagagtcaatcaagaattgagtaaatgtgaagacgaattgaagaaagcaaat
gctcaacaacttaaaatcataaagaatattgaaaaattcctgaaacaatctaatattttg
tccaatcaaaaggagattaagaaacaaatgaaagatgaggctaatcaaaagatcagagat
ttgggtgtgttaccagaagaagcatttcaaagtgataaatatgataagtttacatcgaat
gaattgattagcaaacttaatacagtgaaccaaggtttaactaaatattcccatatcaac
aagaaggccatggaacagtttaatgtgttcaacaaacagcgtgatgatttagttgcaaga
agagttgatctagataactcccgtgaatcaattgaagatttgatctcaaatttgcaacag
caaaagaatgatgctatcaagaagtcattccaacaggttgccaaagctttccatgaagta
tttgaaaaattagttccccgtggtacaggtagattgattatgcagaagaaagatgaaaat
aatgatagtgatgatatagataattattcaggtgtggcaatttcagtttcattcaactcc
aagaatgatgagcaacaaagaattgaacaattatctggaggtcaaaaatcgttatgtgca
attgcgttgatttttgctattcaaaattgtgatccggcaccattttatttatttgatgaa
attgattctaatttggatacacaatatcgtacaagtgttgctaatttgataaagagttta
tctagcgaagctcaatttatttgtactacattcagaccggaattgttgcagttagcagcc
gataaattctatggagttacatttagcaataaagtgagttcaattagtgaaatcaataaa
gaggaagcaatgtcctttgttgaaggtcaacaaaacagataa
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