Candida tropicalis: CTRG_02889
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Entry
CTRG_02889 CDS
T01115
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
ctp
Candida tropicalis
Pathway
ctp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CTRG_02889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctp03021
]
CTRG_02889
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_02889
Transcription machinery [BR:
ctp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CTRG_02889
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CTRG_02889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pfc11_Clp1_ID
Pcf11_C
CID
zf_PCFS4
VHS
Ephrin_rec_like
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
8300394
NCBI-ProteinID:
XP_002548592
UniProt:
C5M917
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MSEILDSYKQSLNELTFNSRPIIDNLTVIAKENPNVADGIIDLVTERIYKTIPEQKLYAL
YLLDSICKTTGNPYNILVSDQIFSLFSHVFQLVNEAIRNRLVSLFETWKVTKTRGTNEPL
FPKSQLDKIDVFLKKAGYPKPATGGLSQQSLINDISQLIPVFENKIRMNPNQKLAERLKA
LNQLKLILSTQVMKVNELQAIQNQLQSIKEQELASSSSKSGTPTGTPSTTPAPASLPPTP
KANPVFQIFDDLILSGLVKKEQEPIPGSKPVYSLVFPQTKYSPSNNEFNPNGTLEELLLA
SSSIQRSDYEKLKFTEMIKVSKSAANNLQDFIKNNKPNSKLRDLLYDAKPSKCSICGKRF
TTDQEGSTKKRLHLDWHFRINKKLSAKGSNVQSRNWYIDDYEWVNFNENELLEYSTDVKL
PDIGDDDKSANVITSSYVVVPSSETNMNNKCLICREQVKATYNDEIGEWVWERCIRQPGE
SKNSRKIVHVACFNESNKKRSADEDLNVHVKRERI
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaattctagattcatataaacaaagtttaaatgaattaacttttaattcacgt
ccaatcattgataacttgacagtgatagctaaagaaaatccgaatgttgcagatggcata
attgatttagtcactgaaagaatctataaaaccatcccggagcagaaactctatgcctta
tatttattggattctatttgtaaaacaacagggaacccatataacatacttgttagtgat
cagatttttagtttattttcccatgtttttcaattagtcaatgaagcaattcgtaatcgt
ttagtaagtttgtttgaaacttggaaagttaccaaaactaggggcaccaatgaaccttta
ttcccaaaatctcaattggataaaattgatgtatttttgaaaaaagccggataccctaaa
ccagcaactggagggttatcccaacaatcacttattaacgacataagccaactaatccca
gtatttgaaaacaaaattagaatgaatccaaatcagaaattagctgaaagactcaaagca
ttgaatcaattaaaattgattttatccacacaagttatgaaggttaatgaattacaagct
atacagaatcaattacaatctataaaagagcaagaattggcatcatcgtcctcgaaaagt
ggaactccaacagggaccccatctacaacccctgctcctgcttcactcccaccaacacca
aaggctaatcctgttttccaaatatttgatgatttgattctttctgggttggtgaagaag
gaacaagaaccaataccgggttcaaaacctgtctattccttggttttccctcaaaccaaa
tactctccatccaataacgaatttaatcctaatggaacattagaagagttgttgttagca
agcagttcaatacaacgttctgattatgaaaaattaaaattcacagaaatgatcaaagtc
agtaaatctgccgcaaataatctacaagatttcatcaagaacaacaaaccaaattcaaag
ttgcgtgatttgttatacgatgccaaaccatccaaatgttctatttgtggtaaaagattt
acaactgaccaagaaggctcaactaaaaagagattacatttggactggcatttcagaatc
aataagaaattgtccgctaaaggtagcaatgtgcaatcaagaaactggtacattgatgat
tacgaatgggttaatttcaatgagaacgagttgttagaatactcaaccgatgtcaagttg
ccagatattggggatgatgataagtctgcgaatgttatcacatcttcgtatgttgttgtg
ccttcatctgaaacaaatatgaataacaaatgtttaatttgtcgagaacaagtaaaggca
acttataatgacgaaattggggaatgggtatgggaaagatgtattagacaacctggtgaa
agtaaaaatagtagaaaaatcgttcatgttgcatgtttcaacgaatcgaataagaagaga
tcagctgatgaggatttaaacgttcacgtcaagcgtgaaaggatttaa
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integrated database retrieval system
