Candida tropicalis: CTRG_03151
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Entry
CTRG_03151 CDS
T01115
Name
(RefSeq) hypothetical protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ctp
Candida tropicalis
Pathway
ctp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTRG_03151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_03151
Enzymes [BR:
ctp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
CTRG_03151
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CTRG_03151
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CTRG_03151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
8299779
NCBI-ProteinID:
XP_002548854
UniProt:
C5MAQ9
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MFIPRFPIRTQLQIMQTIRHFTSTSIIYSDNFQSPSPSPSNVTDKYTARTAYSTSIDTYD
PTKYRKWVTINTERNNPFSIMSFNLLSQHYTWHLTSVEQKYLDWTNYRFPLINKTISQLQ
CDIMCFQEMEFSVYKQFWSHNFPNPNFKSHYAKKTLPPCWGSSEDHIDGVSIFINTLRFD
VLDKKEIHFANHILNHKEEFQLTADLKERMLPRNTVALIVKLFDKVANKIVYVANTHLYW
SPEYNDIKTLQMKILLNELNGFIQEDEDAYVLLAGDLNSTLNSSVIRILSSSGVNVSDCF
SFKNYNYGSNNCLVDKNGDIKNPFNFQSVYQPLISSNSLQFTSHTTGYSGILDHIFASKT
KFQVNRLLGGVDKSYIAKNGFPDAQFPSDHIPIAAEISYL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtttattcctcgatttcctataagaacgcaactacaaatcatgcagactattagacat
tttacttcaacttcaattatctattcagataatttccaatctccatcaccttcaccaagc
aatgttacagataagtatacagctaggacagcatattctacactgatagatacttatgat
cccactaaatatagaaaatgggtaactataaatacagaaagaaataaccctttttcaata
atgtcatttaatcttttatcacaacactacacatggcatctcaccagtgttgaacaaaaa
tatttggattggactaattatcgatttccattaatcaataaaaccatttctcaattacaa
tgtgatattatgtgctttcaagaaatggaatttctggtttataaacaattttggtctcac
aattttccaaatcctaatttcaaaagtcattatgctaaaaagacattacctccttgttgg
ggtctgtcggaagatcatattgatggtgtttccatatttattaatactctaagatttgat
gttttagataagaaagaaatccattttgctaatcatatcttaaaccataaagaagaattc
caattaactgcggatttaaaagaaagaatgttacccagaaataccgttgctttaattgtc
aaactatttgataaagttgccaataagattgtatacgtagctaatactcatctttattgg
tctccagaatataacgatattaaaacattacaaatgaaaattttacttaatgaattgaat
gggtttatccaagaagacgaagatgcttatgtgctattagctggcgatttaaattccact
ttgaattcatcagtgatacgtatactaagcagtagtggtgtcaatgtttcggattgtttt
tcatttaaaaattacaattatgggtctaacaattgtttggttgataagaatggtgacatt
aaaaaccctttcaatttccaaagtgtgtatcaaccactaatatcttccaattctctacaa
ttcacaagtcatacaactggctattcaggaatattagaccatatttttgctagtaaaacc
aaatttcaagtcaatagattattaggcggtgttgataagagttatattgccaaaaatggt
ttcccagatgcacaatttccttccgatcatattccaattgctgcagagattagttatcta
taa
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