Candida tropicalis: CTRG_03177
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Entry
CTRG_03177 CDS
T01115
Name
(RefSeq) DOM34-interacting protein 2
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
ctp
Candida tropicalis
Pathway
ctp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CTRG_03177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctp03009
]
CTRG_03177
Ribosome biogenesis [BR:
ctp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CTRG_03177
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Utp12
ASA1
DSE1_N
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_RIG_2nd
CFAP251_N
WDR54
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_Nup120_160
Beta-prop_Vps41
RMC1_N
WD40_like
Beta-prop_ACSF4
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
8299805
NCBI-ProteinID:
XP_002548880
UniProt:
C5MAT5
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MVKSYNRYDQEKCFGVITSQSNIVWLPPSETQSNTSVGRALTSGLEEILIWDIKTGEILN
RFRDGLNPGSSNASTTVPPSPISYLTYHEINNIIAAGYNDGSIKIWDVSSGSVIINFEGH
KSPITQLKFDKSGTRLVSGSNDTTIIMWDLVGEVGLFKLKGHKGPITGIEFLSESITSEE
EEEEEDLDAMDDYLVSVSKDGLIKLWELKSQQCIETHLAHSNECWSMAIKKTKDMLITSG
NKDQVKIWSLDLSQQDGSKIQERGSFEKSSKSRSNEISFKSLKTSSSSEIIQLFSIQNAD
RTIEIFRIRSDDEIKRGITKRTKRLKDKGLDEEEILESLQNSEISMLVTPFTTIRTMAKI
KSACWTNNIKKMDILVSLANNSIEYDNIPVPENPKKAQPTDLYSVKLHSIDLLGHRTDIR
AMDISPEDNKLLATASNGELKIWNTRTYNVIRTFTLEGGYALCCKFLPGGALIAVGFKNG
DLELYDLATSSLVDKVEKAHSLVGGMSDDDSAAIWSLDITPDGKTLVTGGNDKCVKFWNF
KVEQDVIPGTNTTVSQLKFVHTQTLDLNEDVLCVKISPDAKYLAISLLNNNVQVVFLDTL
KLFLTLYGHKLPVLSIDISSDSKLLITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKF
IGDSHNFFSSGKDGLIKYWDGDKFECIQKLPAHQSEVWCMAISDNGLFMCSTSHDHSIRL
WSATDDQVFIEEEKEKELDEMYENKLLDQIDGNEDDARATRNEDEDGDEMVDESTKVSKQ
TMETLKAGEKLMEALDIGIEEIESEKEYQALIKQGKEAIKPTPNSILLAFDMTASQYVLS
VLTKIKASQLDDALLVLPFSYSLKLLQFIEIWTNKENISGNIVSISLICKVLFFVISANS
KELISQKDPHLKNQLMKVKEQLRSELSNTTKQLGVNTQGLKFIKQQWKLQHASEFIDDEE
EEQRKQIEEKKSNKRSHANV
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggttaagtcatataatcgttatgatcaagagaaatgttttggtgtaattacttcacaa
tctaacattgtttggttaccaccatcagaaactcaatcaaatacatcagtaggaagagca
ttaacttcaggacttgaagaaattttaatttgggatattaaaactggtgaaattttaaat
agatttagagatggattaaatccaggatcttcaaatgcatcaactactgtaccaccatca
cctattagttatttaacatatcatgaaattaataatattatagctgcgggatataatgat
ggatcaattaaaatttgggatgttagttctggatcagttattattaatttcgaaggtcac
aaatctccaattactcaattaaaatttgataaaagtggaactagattagtttctggttca
aatgatactactattattatgtgggatttagttggtgaagttggtttatttaaattgaaa
ggtcataaaggtccaattacaggaattgaattcttaagtgaatcaataaccagtgaagaa
gaagaagaagaagaagatttggatgctatggatgattatttagttagtgtttctaaagat
gggttaattaaattatgggaattaaaatctcaacaatgtattgaaactcatttagctcat
tctaatgaatgttggtcaatggctattaaaaaaactaaagatatgttaattacaagtggt
aataaagatcaagttaaaatatggagtttggatctttctcaacaagatggatctaaaatt
caagaacgtggaagttttgaaaaatctagtaaatcaagaagtaatgaaatttcatttaaa
tcattgaaaacttcatcatcatctgaaatcattcaattattttctattcaaaatgctgat
agaaccattgaaatttttagaattagatcagatgatgaaatcaaacgtggtattactaaa
agaacaaaaagattaaaagataaagggttagatgaagaagaaatcttggaatctttacaa
aattccgaaataagtatgttggttacgccatttacaactataagaactatggccaagatc
aaatctgcttgttggactaataatattaaaaaaatggatattttggtttctttagctaac
aatagtattgaatatgataatattccagtaccagaaaatccaaagaaagcacaaccaact
gatttatactcagtaaagttacattcgattgatttattaggtcatagaactgatattaga
gccatggatatttcaccagaagataataaactattagctactgcatctaatggagaattg
aaaatttggaacacaaggacgtataatgttattcgtacttttacattggaaggtggttat
gcattgtgttgtaaatttttacctgggggtgcattaattgctgttggttttaaaaatggt
gatttagaattgtatgatttggctacttcatcattagttgataaagttgaaaaagctcat
agtcttgttggaggtatgtccgatgatgatagtgccgctatttggtctcttgatataact
ccagatggtaaaacattagtaactggtggtaatgataaatgtgtcaagttttggaatttc
aaagttgaacaagatgtcattccaggtactaatactactgtttcacaattgaaatttgtt
cacacacaaactttagatttgaatgaagatgttctttgtgttaagatttcccctgatgct
aaatatttggcaatttcattattgaataataatgttcaagttgttttcttggatacattg
aaattattccttacattatatggacataaattaccggtattatcaattgatatatcatct
gattcaaaacttttaattacttcttcagctgataagaacattaaaatctgggggttggat
ttcggtgattgtcataaatcattatttgctcatcaagattccattatgaatgttaaattc
attggtgatagtcataatttcttttcgagtggtaaagatggattgattaaatattgggat
ggtgataaatttgaatgtattcagaaattaccagcacatcaaagtgaagtttggtgtatg
gccatcagtgataatggattatttatgtgttccacatcccatgatcactctattagatta
tggctggctacagatgatcaagttttcatagaagaagaaaaagaaaaagaattggatgaa
atgtatgagaataaattattggatcaaattgatggcaatgaagatgatgcaagagcaacc
agaaacgaagatgaggatggtgatgaaatggttgacgaatccactaaagtcagtaaacaa
acgatggaaaccttgaaagctggtgaaaaattaatggaagctttagatattggtattgaa
gaaattgaatctgaaaaggaatatcaagcattgattaaacaaggtaaagaagccattaaa
cctacaccaaattccatattattggcttttgatatgactgctagtcaatatgttttaagt
gtgttgacaaaaattaaagcatctcaattagatgacgctttgttggtattgccattttca
tattcattgaaattattacaatttattgaaatttggaccaataaggaaaacatttctggt
aatatcgttagtatttccttgatttgtaaagttttgttttttgttatcagtgccaattcc
aaagaattgattagtcaaaaggatcctcatttgaagaaccaattgatgaaagttaaagaa
caattaagaagcgaattactgaatacaacaaaacaattgggtgttaatactcaaggtttg
aaatttataaaacagcaatggaaattgcaacatgctagtgaatttattgatgatgaagaa
gaagaacaaagaaaacaaattgaagaaaagaaatcaaacaagagaagccatgctaatgta
tag
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integrated database retrieval system