Candida tropicalis: CTRG_03196
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Entry
CTRG_03196 CDS
T01115
Name
(RefSeq) ribosome biogenesis ATPase RIX7
KO
K14571
ribosome biogenesis ATPase
Organism
ctp
Candida tropicalis
Pathway
ctp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CTRG_03196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctp03009
]
CTRG_03196
Ribosome biogenesis [BR:
ctp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CTRG_03196
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_14
AAA_2
AAA_33
AAA_28
ABC_tran
TIP49
AAA_18
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
ATPase_2
NPHP3_N
Vps4_C
AAA_25
Rad17
AAA_24
NB-ARC
NACHT
AAA_3
Zeta_toxin
AAA_7
IstB_IS21
Parvo_NS1
DUF5906
DUF815
TsaE
Cytidylate_kin2
SKI
AAA_19
Sigma54_activat
PduV-EutP
MMR_HSR1
AAA_29
RsgA_GTPase
CPT
Motif
Other DBs
NCBI-GeneID:
8299824
NCBI-ProteinID:
XP_002548900
UniProt:
C5MAV4
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MSKKKIITGSMDQKIYNLIHDLLEEQTEENKNALEDPENADPFSYIASSNSLTISQVLAY
VQMKDFQLKRMKRNNLEKSIANSLRLIRQDEAEELGKIGPGSDGGSNLENDIDEEDNDEG
RLMDVKDSNELNKSVVALWNLEDNQTVDSKDGDDHQMEDSTIGTKRKVKDNSKSQLKKQK
RKIDHTPPTADLSSLGGVETITTQLLEIIGLPILHPEIYTSTGVEPPRGVLLYGPPGCGK
TTLANALAGELKVPFFNISAPSIVSGMSGESEKKLRDLFEEAKSVAPCLIFMDEIDAITP
KRDGGAQREMERRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDRE
ICLTVPNEEQRISILKAMTKNIKLESGENFDYRELSKLTPGYVGADLKSLVTAAGITAIK
RIFETMSEAQEESSVQKDDSMDIDVTHSESNKELILQNFDKKSEVEKLSTIKKFLMKHPD
PLSQQQLDPLAITYEDFVNALPTVQPSAKREGFATVPDVTWQNVGALSSIRMELHMCIVQ
PIKKPEIYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGES
ERAVRQVFQRARASTPCIIFFDELDALVPRRDNSMSESSSRVVNTLLTELDGLNDRKGVF
VIGATNRPDMIDPAMLRPGRLDKTLYIELPSPEERLEILKTIVRSNNSPLHSDVSLVSVS
QDPRCRNFSGADLSSLVKEAGVSALKKKFFTNQKIQDLDKSGFYQESSDEDKIFITAEDF
DYALSSIRPSVSDRDRVRYEKLNRKLGWNIIPEKENEEKEPQIAS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaagaaaatcattacaggatctatggatcagaaaatctataatttgattcat
gatttgcttgaagagcagacagaagagaataagaatgctttagaagatccagaaaatgct
gatccgttttcatacatagcatcctccaatagcctaaccatttcacaagtattggcttac
gtacagatgaaagactttcagttaaagagaatgaagagaaataatcttgaaaaatcgatt
gccaacagtttgagactaatacgtcaagatgaggcagaagaacttggtaaaattggccct
ggaagcgatggtggttcaaatttggaaaatgatattgacgaagaagacaatgatgaaggt
cgtcttatggatgttaaagacctgaatgaattaaataaatcagttgtagccttatggaac
ttggaagataatcagacggtggatagcaaggatggcgacgatcatcaaatggaagattcc
actattggcaccaaaagaaaagtcaaagataattccaagtctcaattgaaaaaacaaaaa
aggaaaatcgaccatactcctccaactgcagacctttcctctcttggtggtgttgagacc
attaccacacaattacttgagattattgggttgcctatacttcatcctgaaatctatact
agcaccggtgtggaaccaccaaggggtgtacttttgtacggtccaccagggtgtgggaag
accacccttgccaacgcattagccggtgaattgaaagttccattcttcaacatttctgct
ccatccattgtctcaggaatgtcgggagagtctgaaaagaagttgcgtgatttgtttgag
gaggctaaatccgtggctccttgtcttattttcatggacgaaatagatgctattacacca
aagagagatggtggtgcacagagggaaatggaaagaagaattgtagcacaactattaacc
ttgatggatgagttgactttggaaaaaacaggcggtaaacctgttgttgtaatcggggcc
acaaatagacctgattctttagactctgctcttcgacgtgcgggaagatttgatagagaa
atatgtttaactgttcctaacgaagagcaaagaatttcaattctcaaggcaatgacaaag
aacatcaaactcgagagtggtgagaattttgattatagagaattatccaagttgactcct
ggatatgttggggccgatcttaaaagtttggtgactgctgcggggatcacagctatcaag
agaatttttgaaacaatgagtgaagcacaagaagaatcctcagttcagaaagatgattcc
atggacattgacgttacacattccgaatcaaataaagaactcattttgcaaaactttgat
aagaagtccgaagttgagaagttatctaccatcaagaagtttttaatgaagcatccagac
ccattaagtcagcaacaattggatccattggcgatcacatacgaagactttgtcaatgct
cttccaacagtacaacctagtgccaagagagaaggttttgcaacagttccagacgtcaca
tggcaaaatgtcggggcactttcaagcatcagaatggagttgcatatgtgtattgtccaa
ccaatcaagaaaccagagatttatttgaaagtgggtattgctgcacctgctggtgtcttg
atgtggggtcctcctggatgtggtaaaactttgcttgcaaaagctgttgccaatgaatca
agagcaaactttatttctattaaaggtccagagctcttaaacaaatatgttggtgaatca
gaaagagccgtgcgacaagttttccaaagagcccgagcatctactccatgtattatattc
tttgatgaattggatgccttggtaccgcgaagagacaattcaatgtccgagtcaagctcc
agagtggtgaatacgttgttgactgaattggatgggttgaatgacagaaagggtgtgttt
gtaattggtgccaccaatagacccgatatgattgatccggcaatgttaagaccagggaga
ttggacaaaaccttgtatattgagttgccttcaccagaagaaagattagaaatcttgaag
accattgtgagatcaaacaatagtcctttgcattcagatgttctgcttgtatctgtttca
caagatccaagatgtagaaacttttctggggctgatttgtcctcattggttaaagaggct
ggtgtttctgcgttgaagaagaagtttttcaccaaccaaaagattcaagacttggacaag
tcagggttttatcaagagtcatccgacgaagacaaaatattcattactgctgaagatttt
gactatgcactttcttcaatcagaccaagtgtgagcgatagagatcgtgtacgttatgaa
aagttgaacaggaaattgggttggaatataattcctgaaaaggagaatgaagagaaagaa
ccacaaattgcaagttga
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