KEGG   Candida tropicalis: CTRG_03319
Entry
CTRG_03319        CDS       T01115                                 
Name
(RefSeq) predicted protein
  KO
K12881  THO complex subunit 4
Organism
ctp  Candida tropicalis
Pathway
ctp03013  Nucleocytoplasmic transport
ctp03015  mRNA surveillance pathway
ctp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CTRG_03319
  09122 Translation
   03013 Nucleocytoplasmic transport
    CTRG_03319
   03015 mRNA surveillance pathway
    CTRG_03319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctp03019]
    CTRG_03319
   03041 Spliceosome [BR:ctp03041]
    CTRG_03319
Messenger RNA biogenesis [BR:ctp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CTRG_03319
    TREX complex
     CTRG_03319
Spliceosome [BR:ctp03041]
 Complex C
  Other components
   EJC/TREX
    CTRG_03319
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CTRG_03319
SSDB
Motif
Pfam: FoP_duplication RRM_1 xRRM RRM_3
Other DBs
NCBI-GeneID: 8300275
NCBI-ProteinID: XP_002549022
UniProt: C5MB77
LinkDB
Position
Unknown
AA seq 273 aa
MSDILEQSLDDIIGQKKSNSSSSSNRRFQSRNNRRGSSRSSRHHHPYRSSRRDQDDEDLF
SSRSSSRSSSSGIPEKVRLLANNRPTLRIKNIHPDLNGEDLSKLFSNVDDVDFVKFDDDN
DTIAYICFQRNCDINNKNSIEKFNGKKAMGNILVVENTVSLFDRINPRSRGPRDRRRDLS
PSRRREGPRDGGDRRRGGGDRRGGRHSGRTRPAKKTAEDLDKELNEYMGKTSDSLDAELD
DYMKKGNQEEQPEPAANTATTTTTTEGDVMNVD
NT seq 822 nt   +upstreamnt  +downstreamnt
atgtcagatatattagaacaatcattagatgatataattggacaaaagaagtctaattca
tcttcatcttcaaatagaagatttcaatcacgtaataatagaagaggttcatctcgttca
tcacgtcatcatcatccatatagatcatcccgtcgtgatcaagatgatgaagatttattt
tcatcaagatcatcatcaagatcatcatcaagtggaattcctgaaaaagttagattatta
gctaataatagaccaacattaagaattaaaaatattcatcctgatttaaatggagaagat
ttatcaaaattattttcaaatgttgatgatgttgattttgttaaatttgatgatgataat
gatactatagcatatatttgttttcaaagaaattgtgatataaataataaaaattcaatt
gaaaaatttaatggtaaaaaagctatgggaaatatattagttgttgaaaatacagttagt
ttatttgatagaattaatccaagaagtagaggtccaagagatagaagaagagatttatca
ccatcaagaagaagagaaggtccaagagatggtggtgatagaagaagaggtggtggcgat
agaagaggtggtagacatagtggaagaactagacctgcaaagaaaactgctgaagattta
gataaagaattgaatgaatatatgggtaaaacttcagatagtttagatgctgaattggat
gattatatgaaaaaaggtaaccaagaagaacaacctgagcctgctgctaatactgctact
actacaacaacaactgaaggtgatgtaatgaatgttgattaa

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