Candida tropicalis: CTRG_03803
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Entry
CTRG_03803 CDS
T01115
Name
(RefSeq) predicted protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ctp
Candida tropicalis
Pathway
ctp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CTRG_03803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_03803
03041 Spliceosome [BR:
ctp03041
]
CTRG_03803
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CTRG_03803
Spliceosome [BR:
ctp03041
]
Complex B
Other components
Prp19-related factors
CTRG_03803
Complex C
CTRG_03803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
HAT_PRP39_N
NRDE-2
Suf
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
8301429
NCBI-ProteinID:
XP_002549506
UniProt:
C5MDQ1
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MKFDLDKLISKEDISYEESISREPHNISTWLSYYNFKINASFDNRLFILYRAVSVVPDSK
ELWKNLLELILQEGHDIHPNSIKKIFENCLIHLRKDKSIWIEYLRYLESQQQSYDITKIR
RKFNECLQNLPIQEHRDIWPMYLEFAEKVGGLTGAKIYLKYMEYLDPSVIKGEISGEMNL
IEIIEKIREFGDIQESRKLYQKILDNPNEYSNLPNSIVQSIFEYVDILIKEPPRDDAFED
VIERFMIDYPDQLGKLYIKLIEFFKKRNNIAKIRHYYNKGIKQCKTLSDFVLIYDSYLEF
EEDQLIKLAEKDPESNLLSYFMDEFEELINNRKMLINDTLLRQNINDLDAWFARFDLVKD
DLNKLIQTLTEAIRSINPLKVTSVKDHKLCQVWQKYIDIYASRQDFKTSNLIYSKAVLSQ
FKHPDELADLYISWCEMLLGCEEFPENQALEILQDVLNKEYDENNKTVQNKVIKSRKLRE
FYDDLIESFKL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgatttagataagttgatttcaaaagaggatatctcatatgaagagtcaatt
tcaagagaaccacacaatatatcaacatggttatcctattataacttcaaaataaatgcc
ctgtttgataatcgattatttatactatatcgtgcagttagtgtcgtacctgattcgaaa
gaattatggaagaatctactcgaattgattttacaagaaggtcatgatattcatcctaat
agtattaaaaaaatatttgaaaactgtttaattcatcttcggaaagacaagtctatatgg
attgaatatttacgatacttggaatcacaacaacaatcttatgatatcaccaaaattaga
agaaaattcaatgaatgtttacagaacttaccaatacaagaacatagagacatttggcca
atgtatttagaatttgccgaaaaagtaggtggattaactggagcaaaaatatatttgaaa
tatatggaatatttagatccatcggtaatcaagggagaaatatcaggagaaatgaattta
attgaaattattgaaaagattagagaatttggtgatatacaagaatcaaggaaattatat
caaaaaatacttgataatcctaatgagtatctgaatttacctaattctattgttcaaagt
atttttgaatatgttgatattttaataaaagaaccacctagagatgatgcttttgaagat
gttattgaacgattcatgattgattatcctgatcaattaggaaaattatatattaaattg
attgagtttttcaaaaagcgtaataacattgcaaaaattagacattattacaacaagggt
ataaaacagtgcaagacattgtcagattttgttttgatttatgatagttatcttgaattt
gaagaggatcaattgattaaattagctgaaaaggatcccgaactgaacttattgctgtat
ttcatggatgaattcgaagaattaattaacaatcgaaagatgctaattaatgatacttta
ttacgacagaatataaatgatttagatgcatggtttgctcgatttgatttagttaaagat
gacttgaataaattaattcaaacattaactgaagctattcgatcaattaatcccttaaaa
gtgacaagtgtgaaggatcataaattgtgtcaagtttggcagaaatatattgatatttat
gctagtagacaagatttcaaaacgtcaaatttgatctactctaaagctgtattatcacaa
tttaaacatcctgatgaattggcagatttatatatttcttggtgtgagatgttacttgga
tgtgaagaatttccagaaaatcaagctcttgaaatcttacaagatgtattgaataaagaa
tatgatgagaataacaaaactgtacaaaacaaggttatcaaatccaggaaattacgagaa
ttttatgatgatttaatagaatcttttaagttatag
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