Candida tropicalis: CTRG_04040
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Entry
CTRG_04040 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ctp
Candida tropicalis
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_04040
03036 Chromosome and associated proteins [BR:
ctp03036
]
CTRG_04040
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CTRG_04040
Chromosome and associated proteins [BR:
ctp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CTRG_04040
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
CTRG_04040
microRNA pathway
RISC loading complex
CTRG_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL1
ArgoN
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
8297018
NCBI-ProteinID:
XP_002549743
UniProt:
C5MCT9
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MSGAVEFAKIVTPKQDSIPAVNSYKKKFANEIKSDPYSILLRSSYGSAGVNTKVGVNYFK
YNVTGLKLYSYRVELEIGSNVKTRLTTKQAVERYLFDLEPFKSKRSQIYYRDFNNMYSSI
PLPIEDVVVYPIEITVSGEKKTVHLKVKFIKVLNFNDLINYTQLKKYTTDFQETAEYTNA
LVSVIGSQVLQNNHVVGIGSNKFFLIDKSTKKHELEKGLYLVMGTFASVRCSFDNIQVNL
NPTPAIFYKSVKSNGDQMNVLDLIAEFLNLKGLPTERDIRKSEQFMKGVKIRRQYLPKAS
AKAILGFNFKDNSETLKFKDSDDKLVTVKQYFKQRWSISLKYPKLPLIKISSEAYLPMEL
GLIMPNQQYKGELADPAKIIKITASRPMERAKLIASANSNLFQKQVDFGTIDQKFTVVPA
RVLSAPTIEYAKNQKVTYRDVPANGKNETKKGNWNLENFQFVEPARAKQYLFGICLLKDG
SVTKEKIGAFSSAVPLFLSELGRLGIPIRKSNNGHDFRKYSVDLQHESVKTQAGLEATLT
SIFKKAKSQDKCDYLLVLLPRSDTTYYLSVKRVCDLKVGILNSCSILSVFIKQRRGSFDT
MTYAQMAMKVNIKLGGSNHKLSHQDSASLVDKNGVPIMILGADVTHPTGQINHESVSIAA
CVASEDGIFNKFPGSIRIQSGGQEVIKDIKGMVLERLENFHNKVKKLPSKVLFYRDGVSE
GQYYTVLKEELSKIKAAFAEYGRSKKVPKYSPTITFMIVVKRHHTRFIPLEKNAKDPRTN
KVVAVQSYENVIPGTTVDRDITSQAYFDFYIQSQQALQGTGVSAHYYVLHDENNYTSDQI
QRITYNLCHTFSRATKSVKIVPAAYYADLLCTRGRDYIYGFAKDTTLGSSPIERANAKLG
DGIAPNIRNTMFYI
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgcagtagaatttgcaaaaattgttacccctaaacaagatagcattccagct
gtgaactcctataagaaaaagtttgccaatgaaatcaagagtgatccttattcaatttta
ttgagaagctcatacggcagtgccggtgtcaacaccaaggttggtgttaactatttcaag
tacaatgttactggattgaaattgtattcgtaccgtgttgaattggaaattggttccaat
gtgaaaactaggctaaccactaaacaagctgtggaacggtacttgtttgacttggagccg
tttaaatccaagagatctcaaatctattatcgtgatttcaacaacatgtattctagtatt
ccattaccaattgaggatgtggttgtttacccaattgaaattactgtcagtggtgagaag
aaaaccgttcacttgaaagtgaaattcatcaaagtattgaacttcaatgacttgatcaat
tatacccagttgaaaaagtacactaccgattttcaagaaactgcggagtacacaaatgca
ttagtttctgtgattggatctcaggtattgcaaaacaaccatgttgttggaattggatcg
aataagttctttttaattgataaaagtaccaaaaaacatgaattagaaaaaggcttgtat
ctcgtcatgggcacttttgcttcagttagatgctcatttgacaacattcaggttaacctt
aatcctacgccagctatattctataaatcagtgaaaagcaatggtgatcagatgaatgtt
ttggatttgattgctgaatttttgaaccttaaagggttgccaacggaaagagatatcaga
aaatctgagcaatttatgaaaggtgttaagattcgtcgtcaatatctaccaaaggcttct
gcaaaggcaatcttgggtttcaatttcaaagataattcagagacattgaaatttaaggac
tctgatgataaattagttactgtgaaacaatacttcaagcagagatggtcgattagttta
aagtaccccaagttaccattgataaaaattagtctggaagcatatttgcctatggaactt
ggtttgattatgccaaatcagcagtataaaggtgaattggctgatccggcaaagattatt
aaaattacagcttcaaggccaatggaaagagctaaattaattgctctggctaacagcaat
ttgttccagaaacaagttgattttggtaccatagaccagaaatttactgttgtcccagca
agagtattgagtgctccaacaatcgagtatgcaaagaaccaaaaggtaacttacagagat
gttcctgctaatgggaaaaatgaaactaaaaaaggtaactggaatcttgaaaattttcaa
ttcgttgagcctgcaagagctaagcaatacctttttggaatttgtcttttgaaggatggt
tcagtcactaaggagaaaatcggagcattttcttcagcggttccactttttttatccgag
cttggcagattaggtatccctattcgcaagtctaataatggacatgacttcagaaaatac
tctgttgatttacagcatgaaagtgtgaaaactcaagctggattggaggcaactttgaca
agtatattcaaaaaggccaagtcacaagacaaatgtgattatcttttagttttgttaccg
agaagcgatacaacctattatttgtctgtgaaaagagtttgtgatttaaaggttggtatt
cttaacagttgttctattttaagtgtatttatcaagcaaagaagaggctcgtttgatact
atgacttatgcacaaatggccatgaaagtgaacattaaattgggtggttcaaaccacaaa
ttgtcacaccaagatagtgccagtttagttgataagaatggtgtccctattatgattctt
ggagctgatgttacccatccaactggacaaataaatcatgaatcagtttcaattgctgct
tgtgtggcaagtgaggatggcattttcaacaaattcccaggttcaattcgaattcaatct
ggtgggcaagaagttatcaaggatattaaaggaatggttcttgaaagattggaaaatttc
cataataaagtgaaaaagttaccttccaaggtattgttttatcgtgatggagtgtctgag
ggacaatactatactgttttgaaagaagaattatcaaagattaaggctgcatttgcggag
tatggtaggtccaagaaggtgccaaaatattcaccaactataacttttatgattgttgta
aagagacaccatactagattcattccattagagaaaaatgcaaaggatccacgaacaaac
aaagtagtggctgttcaaagctatgagaatgttataccgggaacaactgttgacagagat
attacatcgcaagcgtattttgatttttacattcaatctcagcaagcattacaaggaact
ggtgtctctgcacattattatgttttacatgatgaaaataactatacttcggatcaaatt
caaagaatcacttataatttatgtcacacatttagcagagctacaaaaagtgtcaaaatt
gttcctgctgcttattatgcagacttactttgtactcgtggaagggattacatttatggt
tttgccaaagacacaactttgggatcttctccaatagaacgagcaaatgcaaaactaggt
gatggcatagcgccaaatatccgaaacaccatgttttatatttag
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