Candida tropicalis: CTRG_04318
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Entry
CTRG_04318 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
ctp
Candida tropicalis
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_04318
04131 Membrane trafficking [BR:
ctp04131
]
CTRG_04318
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CTRG_04318
Membrane trafficking [BR:
ctp04131
]
SNARE
SNARE associated proteins
Others
CTRG_04318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
Motif
Other DBs
NCBI-GeneID:
8296739
NCBI-ProteinID:
XP_002550021
UniProt:
C5ME26
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MDQQQKQPQGSIDKSPSGDYPQRPIVLSPPPLDSTSFNAVDALPTGHANRQQSVGYNLQH
EFETLTANLDLDLTSPSRSITQSAPPPQQSVDAQLQQEPKQSLSSGSSAQSSKPALVAPS
ASRYEPRLRSELLGKTASSLLGETSAGGLSPAQQFTSLNPQLDSLLNKSSSNLVGSPSAG
NSFLSGHLAGIPNRPQSVNDFSSIFKRHEQQQQQHQQFFSAPQTSNQSNFYSDLIVFCNW
IENLSPQDNITMIDYLCANLPLDILLTFQSKLDLHLQGGAGAGTGVGAGAGAGAGAGAGI
GVGGSHYQQNQQTHLLPQFSMSPYNQYNQDLYSEMDQLNINDDRSKPKQPSALRTSQYAN
LVDKPLRPKSADPFVNNAKYASSPSQQQHMHQGPIDRAKSPTSHLYEKTNFLQLAAANSN
SSTPPVNGNGMTSYYNQYMSTPLGQSNSPGNTNQGKDIMDLKLGALATINSRVALDSNRK
HPHASNWNQNQSGQQQSQQHNVSRSHAMNYEDSINRTLNSSSVPANMHKTTYNSNSNNNS
NVNNNSNTTNSNNNNQSKSHKKKGHSPTSATQMQHNNSSTVSTNTSSGTSSMPIEVSSLE
LLNNIPAWLKLLRLHKYTEFLKDIPWRDLIELDNDQLEAKGVAALGARRKLLKAFDVVKN
NPPQ
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacaacaaaaacaacctcaaggttcgattgataaatcaccatctggagattac
cctcaaagacccattgtattatcccctccaccattggattcaacttcattcaacgctgtt
gatgccttaccaaccggtcacgccaatagacaacaaagtgttggctataacttacaacac
gaatttgaaactttgactgctaacttggatttagacttgactagtccatcaagaagtatt
actcaaagtgctccacctcctcaacaatctgttgatgctcaactacaacaagaacctaag
caactgttatctagtggcagcagtgctcaatcaagcaaacctgcattggttgcaccttca
gcttcaagatatgaacctcgtttacgttcagagttgttgggtaagactgctagctcatta
cttggtgaaactagtgctggcggattatcaccagcacaacaatttacttcccttaatccg
caactcgacagtttattgaacaaaagtagctcaaatttggttggttccccttccgctggt
aactcatttttatcgggtcatttagctggtattccaaatagacctcaatctgtgaatgat
ttcagtagtattttcaaacgtcacgaacaacagcaacaacaacaccaacagtttttctct
gccccacaaacttccaatcaatcaaacttttatctggatttaattgtattttgcaactgg
attgaaaatttaagccctcaagataatattaccatgattgattatttatgtgccaatttg
ccacttgatatcttgttgacattccaatccaaattggatcttcacttgcaaggtggagct
ggtgctggaactggtgttggagctggagctggagctggagctggagctggagctggtatt
ggtgtaggaggttctcattatcaacaaaaccagcaaactcatctactaccacaattttca
atgtctccatataatcaatacaaccaggatctttactctgaaatggatcaattgaatatc
aatgatgacagatctaaaccaaaacaaccttcggcattaagaacctctcaatatgcaaac
cttgtggataaaccattgagaccaaaatctgctgatccatttgtcaacaacgccaagtat
gcgtcatctccatcacaacaacaacatatgcatcaaggcccaattgatagagcaaaatca
ccaacctctcatttgtatgagaaaaccaatttcttgcaattggcagcagcaaactcaaat
tcctcaactcctccagtcaacggcaatggaatgaccagttactacaaccaatatatgtct
actccattaggtcaatccaattctccaggtaacactaatcaaggaaaggatattatggat
ttaaagttgggtgcattagctacaatcaattcaagagttgcgttagattctaatagaaag
catccacatgcttcaaattggaatcaaaaccaactgggtcaacaacaatctcaacaacat
aatgtttcacgaagtcacgcgatgaattatgaagacagtattaatagaactttgaattcg
tcatctgttcctgcaaatatgcacaagacaacttataatagtaacagtaacaacaacagc
aatgtcaacaacaacagcaacaccaccaacagcaacaataataaccaatcgaaatctcat
aagaagaaaggacattctcctacatcagctactcaaatgcaacacaacaatagttcaacc
gtgagtactaatacttcctcgggtacatcatcaatgccgattgaggtgtcaagtttagaa
ttgttgaacaatattcctgcctggttgaagttattaagattacataaatataccgaattc
ttgaaagatattccatggagagacttaattgaattggataatgatcaattggaagccaaa
ggtgttgctgcattaggtgctagacgtaagttgttgaaagcttttgatgttgttaaaaac
aatccaccacagtaa
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