KEGG   Candida tropicalis: CTRG_04318
Entry
CTRG_04318        CDS       T01115                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K27407  RNA-binding protein VTS1
Organism
ctp  Candida tropicalis
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctp03019]
    CTRG_04318
   04131 Membrane trafficking [BR:ctp04131]
    CTRG_04318
Messenger RNA biogenesis [BR:ctp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     CTRG_04318
Membrane trafficking [BR:ctp04131]
 SNARE
  SNARE associated proteins
   Others
    CTRG_04318
SSDB
Motif
Pfam: SAM_2 SAM_1
Other DBs
NCBI-GeneID: 8296739
NCBI-ProteinID: XP_002550021
UniProt: C5ME26
LinkDB
Position
Unknown
AA seq 664 aa
MDQQQKQPQGSIDKSPSGDYPQRPIVLSPPPLDSTSFNAVDALPTGHANRQQSVGYNLQH
EFETLTANLDLDLTSPSRSITQSAPPPQQSVDAQLQQEPKQSLSSGSSAQSSKPALVAPS
ASRYEPRLRSELLGKTASSLLGETSAGGLSPAQQFTSLNPQLDSLLNKSSSNLVGSPSAG
NSFLSGHLAGIPNRPQSVNDFSSIFKRHEQQQQQHQQFFSAPQTSNQSNFYSDLIVFCNW
IENLSPQDNITMIDYLCANLPLDILLTFQSKLDLHLQGGAGAGTGVGAGAGAGAGAGAGI
GVGGSHYQQNQQTHLLPQFSMSPYNQYNQDLYSEMDQLNINDDRSKPKQPSALRTSQYAN
LVDKPLRPKSADPFVNNAKYASSPSQQQHMHQGPIDRAKSPTSHLYEKTNFLQLAAANSN
SSTPPVNGNGMTSYYNQYMSTPLGQSNSPGNTNQGKDIMDLKLGALATINSRVALDSNRK
HPHASNWNQNQSGQQQSQQHNVSRSHAMNYEDSINRTLNSSSVPANMHKTTYNSNSNNNS
NVNNNSNTTNSNNNNQSKSHKKKGHSPTSATQMQHNNSSTVSTNTSSGTSSMPIEVSSLE
LLNNIPAWLKLLRLHKYTEFLKDIPWRDLIELDNDQLEAKGVAALGARRKLLKAFDVVKN
NPPQ
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggatcaacaacaaaaacaacctcaaggttcgattgataaatcaccatctggagattac
cctcaaagacccattgtattatcccctccaccattggattcaacttcattcaacgctgtt
gatgccttaccaaccggtcacgccaatagacaacaaagtgttggctataacttacaacac
gaatttgaaactttgactgctaacttggatttagacttgactagtccatcaagaagtatt
actcaaagtgctccacctcctcaacaatctgttgatgctcaactacaacaagaacctaag
caactgttatctagtggcagcagtgctcaatcaagcaaacctgcattggttgcaccttca
gcttcaagatatgaacctcgtttacgttcagagttgttgggtaagactgctagctcatta
cttggtgaaactagtgctggcggattatcaccagcacaacaatttacttcccttaatccg
caactcgacagtttattgaacaaaagtagctcaaatttggttggttccccttccgctggt
aactcatttttatcgggtcatttagctggtattccaaatagacctcaatctgtgaatgat
ttcagtagtattttcaaacgtcacgaacaacagcaacaacaacaccaacagtttttctct
gccccacaaacttccaatcaatcaaacttttatctggatttaattgtattttgcaactgg
attgaaaatttaagccctcaagataatattaccatgattgattatttatgtgccaatttg
ccacttgatatcttgttgacattccaatccaaattggatcttcacttgcaaggtggagct
ggtgctggaactggtgttggagctggagctggagctggagctggagctggagctggtatt
ggtgtaggaggttctcattatcaacaaaaccagcaaactcatctactaccacaattttca
atgtctccatataatcaatacaaccaggatctttactctgaaatggatcaattgaatatc
aatgatgacagatctaaaccaaaacaaccttcggcattaagaacctctcaatatgcaaac
cttgtggataaaccattgagaccaaaatctgctgatccatttgtcaacaacgccaagtat
gcgtcatctccatcacaacaacaacatatgcatcaaggcccaattgatagagcaaaatca
ccaacctctcatttgtatgagaaaaccaatttcttgcaattggcagcagcaaactcaaat
tcctcaactcctccagtcaacggcaatggaatgaccagttactacaaccaatatatgtct
actccattaggtcaatccaattctccaggtaacactaatcaaggaaaggatattatggat
ttaaagttgggtgcattagctacaatcaattcaagagttgcgttagattctaatagaaag
catccacatgcttcaaattggaatcaaaaccaactgggtcaacaacaatctcaacaacat
aatgtttcacgaagtcacgcgatgaattatgaagacagtattaatagaactttgaattcg
tcatctgttcctgcaaatatgcacaagacaacttataatagtaacagtaacaacaacagc
aatgtcaacaacaacagcaacaccaccaacagcaacaataataaccaatcgaaatctcat
aagaagaaaggacattctcctacatcagctactcaaatgcaacacaacaatagttcaacc
gtgagtactaatacttcctcgggtacatcatcaatgccgattgaggtgtcaagtttagaa
ttgttgaacaatattcctgcctggttgaagttattaagattacataaatataccgaattc
ttgaaagatattccatggagagacttaattgaattggataatgatcaattggaagccaaa
ggtgttgctgcattaggtgctagacgtaagttgttgaaagcttttgatgttgttaaaaac
aatccaccacagtaa

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