Candida tropicalis: CTRG_04413
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Entry
CTRG_04413 CDS
T01115
Name
(RefSeq) protein MET30
KO
K10259
F-box and WD-40 domain protein MET30
Organism
ctp
Candida tropicalis
Pathway
ctp04111
Cell cycle - yeast
ctp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CTRG_04413
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
CTRG_04413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctp04121
]
CTRG_04413
Ubiquitin system [BR:
ctp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
CTRG_04413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
F-box-like
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_SPT8
NBCH_WD40
F-box
Beta-prop_Nup120_160
WD40_RFWD3
WD40_like
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_RIG_2nd
BBS2_Mid
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_Vps41
WDR90_beta-prop_4th
F-box_4
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
8298646
NCBI-ProteinID:
XP_002550115
UniProt:
C5MEC0
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MDFNQNCDKVSSSVTTDSFNNLINSTTVDSGSNENFHHHHHLNHHSRKQSTSSSSSKSTL
INQTPLDFIQTKPTSPTPGSSSSSSTSMTTEQQEQQEQQEDVSVVTPFLMKHISDQNLIP
KDNFHKYCYRHNPEVTCNKQTDEVRMKLIQEKLELLPNRDQEAISHVWSIFSAAPVHHRQ
LILQGLLSQCCFPQLSFISQEVSQLIKIDFISTLPQEIALKILCYLDCRSLCNAAQVSRK
WKLLADDDRVWHHMCQQHIDRKCPNCGWGLPLMHMKRAREMSTTEEGNIQPNSQGNDATP
TTSTTTASGVTEGEPERKKLKTAPEVNRTKTIVAKKRPWKSVYSERYKLEKNWRKGLFTV
KTFTGHSDGVTCLQFNRKYLMTGSYDTTIKIWKIDTGECIKTLTGHTKGVRSLVFDNQKL
ITGGLDATIKVWNYHTGECIATYRGHDDAIVSVDFTNKSIVSGSADHTVRVWHVDSRTCY
TLRGHTDWVNCVKIHSPSNTVFSASDDTTIRMWDLTTNQCLKVFGGMENNGHIGQVQCVI
PFTYKEELIEDESESESESSKPSTTLSESIPRLTPQPDSSSSSSSQIATMTTTSNTNCLY
PTHLLTSSLDNTIKLWDVKTGKCIRTQFGHIEGVWSIAADTFRIISGAHDRLIKVWDLQN
GKCLHTFSNNSSVSCVGLSDSKFVAGLENGEVKMYSFE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaatcaaaattgtgataaagtttcttcttcagtaacaactgatagttttaat
aatttaatcaattcaaccacggttgattccggttctaatgaaaattttcatcatcatcat
catcttaaccatcattcaaggaaacaatctacttcatcatcatcttcaaaatcaacatta
ataaatcaaacaccattggatttcattcaaacaaaaccaacttctccaacaccaggatca
tcatcatcatcatcgacttctatgactactgaacaacaagaacaacaagaacaacaagaa
gatgtatctgttgttactccatttttaatgaaacatataagtgatcaaaatttgattcct
aaagataattttcataaatattgttatcgtcataatccagaagttacatgtaataaacaa
acagatgaagtacgaatgaaacttatacaagaaaaattggaattacttcccaatagagat
caagaagctatttcacatgtatggtcaattttcagtgctgcacctgtacatcatcgacaa
ttaatattacaaggattattaagtcaatgctgtttcccacaattatcatttatttctcaa
gaagttagtcaattaattaaaattgattttatatctacattgcctcaagaaatagctctt
aaaattttatgttatttggattgcagaagtttatgtaatgctgctcaagttagtaggaaa
tggaaattattggcagatgatgatagagtatggcatcatatgtgtcaacaacatattgat
agaaaatgtcctaattgtggatggggattaccattgatgcatatgaaaagagcaagagaa
atgtcaactaccgaagaaggaaatattcaacctaattcacaaggcaatgatgcaacacca
acaacatcaacaacaactgcaagtggtgtaactgaaggtgaaccagaaaggaaaaaattg
aaaactgcaccagaagttaatcgtactaaaacaattgttgctaagaaaagaccgtggaaa
tctgtttattcagaaagatataagttggaaaaaaattggagaaaaggattatttacagtt
aaaacatttactggtcatagtgatggagttacatgtttacaatttaatagaaaatattta
atgactggttcatatgatacaactattaaaatatggaaaattgataccggtgaatgtatt
aaaacattaactggtcatactaaaggggtacgatcattagtatttgataatcaaaaatta
atcactggtgggttagatgctacaattaaagtatggaattatcatactggtgaatgtatt
gctacttatagaggacacgatgatgccattgtatctgttgattttaccaataaatctatt
gtttcagggtcagcagatcatactgtgcgtgtttggcatgttgattcaagaacttgttat
actttaagaggacatacagattgggttaattgtgttaaaattcatctgccttcaaataca
gttttcagtgctagtgatgataccactattagaatgtgggatttaactaccaatcaatgt
cttaaagtgtttggaggtatggaaaataatggacatattggtcaagttcaatgtgttatt
ccatttacttataaagaagaattgattgaagatgaaagtgaaagtgaatcagaaagttca
aaaccatcaacaactttaagtgaatcaattccaaggcttacgccacaaccagacctgtct
tcatcatcatcatcacaaattgcaacgatgactactaccagtaatacaaattgtttatat
cctacacatttattgacatcatcattagataatacaattaaattatgggatgttaaaact
gggaaatgtattcgcacacaatttggacatattgaaggagtgtggtcaattgcagctgat
acatttagaattattagtggagctcatgatagattaattaaagtatgggatttacaaaat
gggaaatgtttacatacatttagtaataattcatcagtttcttgtgttggattaagtgat
tcaaaatttgttgctggtttggaaaatggtgaagttaaaatgtatagctttgaataa
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