Candida tropicalis: CTRG_04558
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Entry
CTRG_04558 CDS
T01115
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ctp
Candida tropicalis
Pathway
ctp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CTRG_04558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctp03021
]
CTRG_04558
Transcription machinery [BR:
ctp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CTRG_04558
Prokaryotic type
Archaeal type
TFB
CTRG_04558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_3
DUF2824
Regnase_1_C
Motif
Other DBs
NCBI-GeneID:
8301089
NCBI-ProteinID:
XP_002550260
UniProt:
C5MER5
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MSPSTSTAVQEYVGPNLNVTLTCPECKIFPPDLVERFSEGDIVCGSCGLVLSDRVVDTRS
EWRTFSNDDQNGDDPSRVGDAGNPLLDTEDLSTMISYVPDNTKVGRELNRAQSKSLVDKK
DNALAAAYVKISQMCDGYQLPKIVSDGAKEVYKMVYDEKPLRGKSQESIMAASIFIGCRK
ANVARSFKEIWALTNVPRKEIGKVFKIMDKIIREKNAANPNAAYYTQDSISTTQTSAEDL
IRRFCSHLGVNAQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMASLVFGIDLPPSKI
SDKTGVSDGTIKTSYKYMYEEKEKLIDPYWVESGKVKLENIPKN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtccccatcaacatctacagctgttcaagaatacgttggacctaatttaaatgttacc
ttgacatgcccggagtgtaaaatatttccaccagatctagtagaaagattcagtgaaggt
gatattgtatgtggtagttgtggattagttttaagtgatagagtagtcgacactcgatcc
gaatggagaacatttagcaatgatgaccaaaatggtgacgatccatctcgtgtaggagat
gctggtaatccattgttagatacggaagacttatccactatgatttcatatgtgccagat
aatacaaaagttggaagagaattgaatagagctcaatccaagtctttagtggataagaag
gataatgcattagctgctgcttatgtcaagatttcccaaatgtgtgatggttatcaatta
ccaaagattgtcctggatggtgccaaggaagtttacaagatggtttatgatgaaaaacca
ttaagaggtaagtcacaggaaagtatcatggccgcttctattttcattggttgtagaaag
gcaaatgttgcacgttcgttcaaagaaatttgggccttgactaatgtcccacgtaaagag
attggtaaagttttcaaaatcatggataagattattcgtgagaagaatgcagctaatcca
aatgctgcttattacactcaagatagtatctcaactacacaaacatctgcggaagatttg
attagaagattctgttctcacttgggtgttaatgcacaagtaaccaatggtgcggaatac
attgcgagaagatgtaaagaagttggtgtgttggccggtagatccccaacaaccatcgct
gctactgtcatatatatggcttcacttgtctttggtattgatttaccaccttccaagatt
tcagataaaactggtgttagtgatggtactatcaaaacctcgtacaaatatatgtatgaa
gaaaaagaaaagttaattgatccttactgggttgaaagtggtaaagttaaattggagaat
attcctaaaaattga
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