Candida tropicalis: CTRG_04792
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Entry
CTRG_04792 CDS
T01115
Name
(RefSeq) chromo domain protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ctp
Candida tropicalis
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctp03021
]
CTRG_04792
03036 Chromosome and associated proteins [BR:
ctp03036
]
CTRG_04792
Transcription machinery [BR:
ctp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CTRG_04792
Chromosome and associated proteins [BR:
ctp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
CTRG_04792
SLIK complex
CTRG_04792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Cdh1_DBD_1
CHD1-like_C
Helicase_C
HTH_Hrp3
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
8296501
NCBI-ProteinID:
XP_002550494
UniProt:
C5MFE9
LinkDB
All DBs
Position
Unknown
AA seq
1423 aa
AA seq
DB search
MGRPDLPEEAELNPELYGLRRSHRERRGPVIVESDSEEDEVRPTRKRKKINDDYDEDMSD
EDDDNIDEEEDDFDYDDDFGSSKKKKKRTSKASSSSKKKKLSKKQAKSTPSPPAELRFST
RNSKQVNYAIDYDDDDEDLMESEPEMDEDDDEGDYYYYQQANEPENERGIDIVMDHKINE
DNTELTNDPKLDYLFKVKWTDASHLHNTWEKYQDLKNYKGFRKLDNYIKQFIIYDQEIRN
DPLTTKEDIESMDIERERKRDEQEEYTQVERIVDSERIESDDGTTKLQYFVKWKRLYYDE
CSWEDAEEIAKIAPEQVKKYQQRLNSKILPSLSANYPQSQRPRFEKLFKQPVFIKNGELR
DFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHLVVVPLSTV
PAWQETFEKWAPDVNCIYYLGNGEARKNIRDYEFYNQNNKPKFNILLTTYEYILKDKTEL
GSFKWQFLAVDEAHRLKNAESSLYEALKSFKVSNRLLITGTPLQNNVKELAALCNFLMPG
KFNIDQEIDFDSIDKEQEQYIKDLQKKINPFILRRLKKDVEKSLPSKSERILRVELSDIQ
TEYYKNIITKNYAALNAGNKGSQISLLNVMSELKKASNHPYLFDGAEERVLEKAGSYSRE
NTLRGMIMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGT
IPSSQRKISIDHFNAPDSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMAR
AHRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIISLGITDPNAKKNGKTDPSTS
ELSQILKFGAGTMFKENNNQQKLENLNLDDVLSHAEDHVTTPDLGESNLGSEEFLKQFEV
TDYKADVEWDDIIPQEELTKLKDEEKRKADEQYLQEQIAMFSRRKAAMRKFENGSTVPSD
VEDSAEDARPARRRNAGDHQLSEKEIRGIYRSILKWGDLSGKWEQLVEEGSITNKNPVLV
KHAYNEIINTSKQLVKEEEARRSQVLAELERKAEEQKSRPPNPGEPNQTALWLAKKKEKK
AVLFEYQGVKNINAEIVLNRPIDMKLLEKMIPNDDLMSFQLPKHPKSVQSWSCAWTPRDD
AMLLVGVYKFGYGSWVQIRDDPLLGLQNKLFLEGAPPPSSKDKPANTATSSTTTATTTTG
NNGATTDASAIATKPEGKESSKKVPGSVHLGRRVDYLFTLLKDDDGSNTPVGATRKRVRK
PTPTPSNISHGHTNGSRPKKPIKSETPDKFGKSKRPQSVQRHTSSASPSSAVGGGGHGRV
KEEKREKEYASMDESRCKSVMQPVVSSLHKLHKGSRGLEKHEWAKVLKSELLKIGDFIET
EVAKVGEKDKLRKHLWGFTGLYWPSKVPSDKISAMYSRIKGSK
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaccagacttaccagaagaagccgaattaaatccagaactttacggtttaaga
aggtcacatcgtgaacgaagaggtccagttattgttgaatcagattccgaagaagatgaa
gttcgaccaacgcgaaaaaggaagaagattaatgatgattatgatgaagatatgtcagac
gaagatgatgataacattgatgaagaggaagatgattttgattatgatgatgatttcggt
agtagtaagaaaaagaaaaagaggacttcaaaagcttcttcatcttctaaaaagaagaag
ttgtcaaaaaaacaggctaaatctaccccatctccaccagctgagcttagattttctacg
agaaatagtaagcaagtcaactatgccattgattacgatgacgatgacgaggatttaatg
gaaagtgaaccggaaatggacgaggatgacgacgaaggagattattactattatcaacaa
gccaatgaaccagaaaacgagcgtggaatagatattgtcatggaccataaaattaatgag
gataataccgagcttacgaatgatcctaaattggattatcttttcaaagttaaatggact
gacgcttcacatttgcataacacttgggaaaaataccaagacttgaaaaactacaaagga
tttagaaaattagacaattatatcaaacagtttatcatatatgatcaagaaattagaaat
gatcctttgactacaaaggaagacatagagtctatggatattgaaagagaaagaaaaaga
gacgaacaggaagaatatacacaggttgaaagaatagttgacagcgaaagaatcgaatct
gacgatggtaccaccaaattacaatattttgttaaatggaaacgactttactatgatgaa
tgttcctgggaagatgcagaagaaattgcaaaaattgctcctgaacaagttaaaaaatac
caacagagattaaactcaaagattttgccaagtctttcagccaattaccctcaatcacag
agaccaagatttgaaaaattattcaaacaaccagttttcataaagaatggtgaattaaga
gatttccagttgacagggttgaattggatggcgtttctttggtcaagaaacgagaatggt
attttggcagatgagatgggattaggtaaaaccgttcaaactgttgcctttttgtcatgg
ttaatttatgctagaagacagaatggtccacacttggtggtggttccattatccactgtc
cctgcttggcaagagacttttgaaaaatgggctccagatgtcaattgtatttactatttg
ggtaatggtgaggcaagaaaaaacatcagagactatgaattctacaaccaaaataacaaa
ccaaagtttaatattttattaacaacatatgagtatatcttgaaagataaaacagaactt
ggttcatttaagtggcaatttttagctgttgatgaagcacatagattgaaaaatgctgaa
tcatcattgtatgaagcgttgaaaagttttaaagtctccaacagattattgatcactggt
actccattacagaataatgttaaagaattggctgcattgtgtaactttttgatgccaggt
aagtttaatattgatcaagaaattgattttgatagtattgacaaggagcaagaacagtat
attaaagatttacaaaagaaaatcaatccatttattttaagacgtttaaagaaagatgtt
gaaaagtcgttaccatcaaaatcagaacgtattttaagagttgagttgtctgatattcaa
acagaatattacaagaacatcatcactaagaattatgccgcattaaatgctggtaataaa
ggttctcaaatttcgttgttgaatgttatgagtgaattgaagaaagcatccaatcaccca
tatttgtttgatggtgctgaagaaagagtcttggaaaaggctggttcatattcaagagag
aatactcttagaggtatgattatgtcatcaggtaagatggtattgcttgaacaattgttg
actagattaaagaaagaaggtcacagagtgttgattttctcacaaatggttagaatgttg
gatattttaggtgattacatgtttatcaaaggttaccaatttcaaagattagatggtaca
attccatcttcacaaagaaaaatatctattgatcattttaatgctccggattccaaggat
tttgcattcttattgtccactagagctggtggtttaggtattaacttgatgactgctgat
actgttattatttttgattcagactggaatcctcaagcagatttgcaagccatggctcgt
gctcatagaattggtcagaaaaaccatgtttctgtttatcgatttgtcagtaaagataca
gttgaagaacagattttagaaagagctagaaagaagatggttcttgaatatgctattatt
tctttaggtataacggatccaaatgccaagaagaatggtaaaacagatccatctacaagt
gaattgagtcaaattttgaaatttggtgcgggaaccatgtttaaggaaaacaataaccaa
caaaagttggagaacttgaacttggatgatgttttgagtcatgctgaagatcatgtcaca
actcctgacttgggtgaatctaacttgggttctgaggaattcttgaaacaatttgaggtt
actgattataaagctgatgttgaatgggatgatattattccacaagaagagttgaccaag
ttgaaagatgaagaaaagagaaaagccgacgaacagtatttgcaagaacaaattgccatg
ttttctagaagaaaagctgccatgcgtaaatttgagaatggctctacagttccaagtgat
gttgaagatagtgctgaggatgcaagacctgcaagaagaagaaatgctggagatcatcaa
ttgtctgaaaaggaaattagaggtatttacagatctattttgaaatggggtgatttaagt
ggtaaatgggaacagttagtcgaagaaggtagtatcactaataagaatcccgttttggtg
aaacatgcatataatgaaataatcaacacctcaaaacaattggtaaaagaagaagaagca
agacgttcacaagttctcgctgaattagaaagaaaagcagaagaacagaaatcaagaccg
ccaaacccaggtgaacctaaccaaactgcattatggcttgccaaaaagaaagaaaagaag
gctgttttatttgaatatcaaggtgttaaaaatatcaatgctgaaattgtgttaaacaga
cctattgatatgaaacttttagaaaagatgataccgaatgacgatcttatgagtttccaa
ttacctaaacatccaaagtctgtacaatcatggagttgtgcatggaccccaagagatgat
gccatgttattggttggtgtttataaatttggttatggttcatgggttcaaattcgtgat
gatccattattgggacttcaaaataaattattcttagaaggtgcaccacctccatcaagt
aaagataaacctgcaaacacagcgacatcttcaacaacaacagcaacaacaacaactggg
aacaatggtgccactacagatgcatctgctatagcaacaaaaccagaaggaaaggagtct
tctaagaaagtgccaggatctgttcatttaggtagaagagttgattatttatttactttg
cttaaagacgacgatggatcaaacactcctgttggtgctactagaaagagggtgagaaaa
ccaaccccaactccatcgaatatttcacatggtcataccaatggtagtaggcctaagaaa
ccaattaaatccgaaactcctgataaatttggcaaaagtaagagaccacagtctgtacaa
agacatacatctagtgcttctccatcttctgctgtgggcggtggtggtcatggtagagtg
aaagaagaaaagcgtgaaaaggaatatgccagtatggatgaatctagatgtaaatcagtc
atgcaaccggttgtgctgtcattacataaattgcataaaggaagtagaggtttagaaaaa
catgaatgggccaaagtattaaaatcggaattgctcaagattggtgactttattgaaact
gaggttgcaaaagttggagaaaaagataaattgagaaaacatttatggggattcactgga
ctttattggccatcaaaagtaccaagtgataagatcagtgcgatgtacagcagaatcaaa
ggatctaagtaa
DBGET
integrated database retrieval system
