KEGG   Candida tropicalis: CTRG_04872
Entry
CTRG_04872        CDS       T01115                                 
Name
(RefSeq) activator 1 41 kDa subunit
  KO
K10755  replication factor C subunit 2/4
Organism
ctp  Candida tropicalis
Pathway
ctp03030  DNA replication
ctp03410  Base excision repair
ctp03420  Nucleotide excision repair
ctp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CTRG_04872
   03410 Base excision repair
    CTRG_04872
   03420 Nucleotide excision repair
    CTRG_04872
   03430 Mismatch repair
    CTRG_04872
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ctp03032]
    CTRG_04872
   03036 Chromosome and associated proteins [BR:ctp03036]
    CTRG_04872
   03400 DNA repair and recombination proteins [BR:ctp03400]
    CTRG_04872
DNA replication proteins [BR:ctp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CTRG_04872
  DNA Replication Termination Factors
   ELG1-RFC complex
    CTRG_04872
Chromosome and associated proteins [BR:ctp03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CTRG_04872
DNA repair and recombination proteins [BR:ctp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CTRG_04872
  Check point factors
   HRAD17(Rad24)-RFC complex
    CTRG_04872
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_22 AAA_11 AAA_16 Mg_chelatase RuvB_N DUF815 AAA_14 AAA_24 AAA_23 AAA_19 AAA_30 SLFN-g3_helicase AAA_7 AAA_5 DEAD AAA_assoc_2 AAA_28 AAA_2 ResIII bpMoxR AAA_3 RNA_helicase
Other DBs
NCBI-GeneID: 8298875
NCBI-ProteinID: XP_002550574
UniProt: C5MFM9
LinkDB
Position
Unknown
AA seq 354 aa
MSIESRKARDQAYEEEKLHHTPWVEKYRPKSLSDISSQEHTVKVLTQTITSGNLPHMLFY
GPPGTGKTSTILALAKTLYGPNLYKSRVLELNASDERGISIVREKIKNFARLTISNPSKE
DLEKYPCPPYKIIILDEADSMTNDAQSALRRTMETYAGITRFVLICNYITRIIDPLTSRC
SKFRFKLLNNENALLRLRFIANEENLRYTGDDVLNEVLKISAGDLRKGITYLQSAAKLSS
TFDDNDDKGIITVKTIRETAGILHDDVLNELIDIMKSKNVQKIIQAVNEIELNGWSAQIL
LDQLHDILILDDRLDSLAKNKIAKFFFESDRKLNNGTDEHIQLLNIILQVSNVL
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgtcaattgaatctagaaaggctagagatcaagcatatgaagaagaaaaacttcatcat
actccatgggttgaaaaatatcgtcctaaatcattatctgatatttcatcacaagaacat
acagttaaagtattaacacaaacaattacttcaggtaatttaccacatatgttattttat
ggaccaccaggtacaggtaaaacatcaactatattagcattagctaaaacattatatgga
cctaatttatataaatcaagagtattagaattaaatgcatctgatgaaagagggatatct
atagttcgtgaaaaaattaaaaattttgccagattaacaataagtaatccaagtaaagaa
gatttagaaaaatatccatgtccaccttataaaataattatattagatgaagctgattca
atgactaatgatgcacaatctgcattaagaagaacaatggaaacttatgctggtataaca
agatttgtattaatttgtaattatattacaagaattatagatcctttaacttcacgttgt
tcaaaatttagatttaaattattaaataatgaaaatgctttattaagattaagatttatt
gctaatgaagaaaatttaagatatactggtgatgacgtattaaatgaagttttaaaaata
agtgctggagatttaagaaaaggtattacttatttacaaagtgctgctaaattaagttca
acttttgatgataatgatgataaaggtattataactgttaaaacaattagagaaactgct
gggattttacatgatgatgtattaaatgaattgattgatattatgaagagtaaaaatgtt
caaaaaataattcaagcagttaatgaaattgaattaaatggttggtctgctcaaatatta
ttagatcaattacatgatattttaatcttggatgatagattggattctttagctaaaaat
aaaatcgctaaattcttctttgaactggatagaaaattaaataatggtactgatgaacac
attcaattgttgaatataatattacaagtttcaaatgtattataa

DBGET integrated database retrieval system