Candida tropicalis: CTRG_04872
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Entry
CTRG_04872 CDS
T01115
Name
(RefSeq) activator 1 41 kDa subunit
KO
K10755
replication factor C subunit 2/4
Organism
ctp
Candida tropicalis
Pathway
ctp03030
DNA replication
ctp03410
Base excision repair
ctp03420
Nucleotide excision repair
ctp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTRG_04872
03410 Base excision repair
CTRG_04872
03420 Nucleotide excision repair
CTRG_04872
03430 Mismatch repair
CTRG_04872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctp03032
]
CTRG_04872
03036 Chromosome and associated proteins [BR:
ctp03036
]
CTRG_04872
03400 DNA repair and recombination proteins [BR:
ctp03400
]
CTRG_04872
DNA replication proteins [BR:
ctp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CTRG_04872
DNA Replication Termination Factors
ELG1-RFC complex
CTRG_04872
Chromosome and associated proteins [BR:
ctp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CTRG_04872
DNA repair and recombination proteins [BR:
ctp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CTRG_04872
Check point factors
HRAD17(Rad24)-RFC complex
CTRG_04872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
AAA_11
AAA_16
Mg_chelatase
RuvB_N
DUF815
AAA_14
AAA_24
AAA_23
AAA_19
AAA_30
SLFN-g3_helicase
AAA_7
AAA_5
DEAD
AAA_assoc_2
AAA_28
AAA_2
ResIII
bpMoxR
AAA_3
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
8298875
NCBI-ProteinID:
XP_002550574
UniProt:
C5MFM9
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MSIESRKARDQAYEEEKLHHTPWVEKYRPKSLSDISSQEHTVKVLTQTITSGNLPHMLFY
GPPGTGKTSTILALAKTLYGPNLYKSRVLELNASDERGISIVREKIKNFARLTISNPSKE
DLEKYPCPPYKIIILDEADSMTNDAQSALRRTMETYAGITRFVLICNYITRIIDPLTSRC
SKFRFKLLNNENALLRLRFIANEENLRYTGDDVLNEVLKISAGDLRKGITYLQSAAKLSS
TFDDNDDKGIITVKTIRETAGILHDDVLNELIDIMKSKNVQKIIQAVNEIELNGWSAQIL
LDQLHDILILDDRLDSLAKNKIAKFFFESDRKLNNGTDEHIQLLNIILQVSNVL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgaatctagaaaggctagagatcaagcatatgaagaagaaaaacttcatcat
actccatgggttgaaaaatatcgtcctaaatcattatctgatatttcatcacaagaacat
acagttaaagtattaacacaaacaattacttcaggtaatttaccacatatgttattttat
ggaccaccaggtacaggtaaaacatcaactatattagcattagctaaaacattatatgga
cctaatttatataaatcaagagtattagaattaaatgcatctgatgaaagagggatatct
atagttcgtgaaaaaattaaaaattttgccagattaacaataagtaatccaagtaaagaa
gatttagaaaaatatccatgtccaccttataaaataattatattagatgaagctgattca
atgactaatgatgcacaatctgcattaagaagaacaatggaaacttatgctggtataaca
agatttgtattaatttgtaattatattacaagaattatagatcctttaacttcacgttgt
tcaaaatttagatttaaattattaaataatgaaaatgctttattaagattaagatttatt
gctaatgaagaaaatttaagatatactggtgatgacgtattaaatgaagttttaaaaata
agtgctggagatttaagaaaaggtattacttatttacaaagtgctgctaaattaagttca
acttttgatgataatgatgataaaggtattataactgttaaaacaattagagaaactgct
gggattttacatgatgatgtattaaatgaattgattgatattatgaagagtaaaaatgtt
caaaaaataattcaagcagttaatgaaattgaattaaatggttggtctgctcaaatatta
ttagatcaattacatgatattttaatcttggatgatagattggattctttagctaaaaat
aaaatcgctaaattcttctttgaactggatagaaaattaaataatggtactgatgaacac
attcaattgttgaatataatattacaagtttcaaatgtattataa
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