Candida tropicalis: CTRG_04973
Help
Entry
CTRG_04973 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
ctp
Candida tropicalis
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctp03021
]
CTRG_04973
03036 Chromosome and associated proteins [BR:
ctp03036
]
CTRG_04973
Transcription machinery [BR:
ctp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CTRG_04973
Chromosome and associated proteins [BR:
ctp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CTRG_04973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
YqgF
HHH_7
SPT6_acidic
Tex_central_region
HHH_9
Spt6_S1
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
8299047
NCBI-ProteinID:
XP_002550675
UniProt:
C5MFY0
LinkDB
All DBs
Position
Unknown
AA seq
1422 aa
AA seq
DB search
MASEDEIERNNHEDNSQSEGEGDDLREQIVDSSEEDDDDDDEEEIQKVREGFIVDDDEDE
IETRKRKKHKKRRRERSNEDRDDALDDDDLQLLLENSGLQGSRQSKFKKLKRKHVEDDED
DVVESNQQQYQNRESSGMRNMFSDDEDEEGLDEDEDRGSRARNNIVDEFDDFIEEDEFSD
EDEEAQRARREQKKKMKKKGARIDTSKLSSVDRQSLQELFEVFGDGNEYDWALEAQEMED
SGNLDKEEPATLDEVFEHSELKERMLTDEDNLIRIIDVPERYQKYRSTLTYIDLEGEELE
MEKNWVSDAMMRERSTPLPEGAEESYKQCVGNIIDFISKENLEVPFINTHRLDYLEYVPD
YDPNNRIRLFNEDDLWRIVKLDIEYHTLYEKRLNAEKLVDSLDLDDDLIKDIKSLDTMVA
VQDVHDYIQFTYSKEIREKASSQGADDSENNEDNAKSQPRKHMKVTLYERIKSNILYDAV
NAYGITAKQFGENVQDQSSKGFEVPYRIHATDDSWESPEELIQRLAQDDEIMFKDEKIAR
DAVRKTFAEEIFHNPRIRQEVRQTYKMYTSINFVVTEKGRATIDNHSPYADIKYAINRDP
VDLVTKPDVLLRMLEAEKLGLGVIVVETRDYNSWFESIFNCFKSDGSSDVSERWNKEREV
VLRMAFKKLCSMVALNTKEDLRRECERLIANQVKRGLVNRIDQAPLQAFGFEFGSTANVL
SITFGKGDFDSAVIGVYMRDNGKIVHTLKSNENPIRNRETEDVFKGWFLEQYDNLFRSEK
PDVIVVSGFNANTKKLYDIICNIVAENKLGTSAVKDEYDDNSAPVQVIWGQDETARLYQN
SERASKEFPDKPPLVKYAIALGRYVQDPLLEYVTLGDDILSLTFHPHQKLIPTDLIKESI
ESAFVDMVNLVGVKINDATRSTRVSQMMQYVGGLGPRKASGLLRNINSHLYGVLVNRSAL
IESELTSANIFINCASSLNVVVDKTITSSDYGIEVLDSTRIHPEDYDLAKKMASDALGID
EEDAMVMNQDGRGGVVRQLIKDDPEKLNSLDLVSFAQRLEERSHKKKLRTLQAIRQELIN
RYEEARQPFRILNNDDAFFILTGEHAYELRNTVVPITIVKISKNYNDPYGRVKGMRVITP
SLIQGRIDEGQIPQNIEYQEGQVVQGVLLELYTDSFTAVLSLRKEDIKRAMAPSVQHQYG
KWDFEAQDADIAKERAKENAKLAKTRNVQHPLFRNFNFRQAEEYLAPQKVGDCVIRPSSK
GPQFLTITWKVAPTLFQHLLVEERSRGRSREYYVEGQRYQDLDQLIFQHIQVIAKNVSSM
VHNGKFREGTMTVVNEWLESYTRANPKSSAYAFCYDHKSPGNFLLLFKINSNTKVVTWHV
KTCVNGYILKTFTYPNMISLCNGFKQTVKNMSQPQTYNYGGY
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggcactggaagacgaaattgaacgtaataatcacgaagacaattctcaatctgagggt
gaaggagatgatctcagagaacaaatagttgattcttcagaagaagacgatgatgacgat
gacgaagaagaaattcaaaaagttcgtgaaggtttcattgtcgatgatgatgaagatgaa
atcgaaacaagaaagaggaaaaagcataagaaaagaagaagagaaagactgaatgaagat
cgtgatgatgcattggatgatgatgatttacaattattattagaaaattcaggtcttcaa
ggttcacgtcaatctaagtttaagaaattaaagagaaagcatgttgaggacgatgaggat
gatgttgttgagtccaatcaacaacaatatcagaatagagagtcaagtggaatgcgtaat
atgttttcagacgatgaagatgaagaaggtttagatgaggatgaggacagaggatctcgt
gctagaaacaatatcgttgatgaatttgatgatttcatagaggaagatgagttttccgat
gaagatgaagaagctcagcgtgcaagaagagagcaaaagaagaaaatgaagaagaaagga
gcaagaattgatacttccaaattatctagtgtcgatcgacaaagtttacaagagttattc
gaagtttttggtgatggtaatgaatatgattgggcattggaagctcaagaaatggaagat
tcaggtaatttggataaagaagaacctgctaccttggatgaagtttttgaacattctgaa
ttgaaagaacgtatgttgaccgatgaagataatcttattcgtattattgatgttcctgag
agataccaaaagtaccgtagcactttgacatatattgacttggaaggtgaagaactagaa
atggaaaagaattgggtaagtgatgccatgatgcgtgaaagatctacacctctccctgaa
ggtgctgaagaatcatacaagcaatgtgttggtaacattattgatttcatctccaaggag
aaccttgaagtcccctttatcaatactcaccgtctagactatttagaatacgttccagat
tatgatccaaacaatagaattagattgtttaacgaagatgatttgtggagaatagttaaa
ttggatattgaataccatacactttatgaaaagagattgaatgctgagaaattggttgac
tcattggatttagatgatgatttgatcaaggatatcaaatcgttggatactatggttgct
gttcaagatgtacatgattatatacaattcacttactctaaggaaataagagaaaaagca
tcttcacaaggggcagatgatctggagaacaacgaggataatgcgaaatctcaaccaaga
aagcatatgaaggttacactttatgaaagaatcaagtccaatattttatacgatgctgtc
aatgcctatggtatcaccgccaagcaatttggtgaaaatgttcaagatcaaagttccaaa
ggttttgaagttccgtacagaattcatgctactgatgactcctgggaatcgccagaagaa
ttgattcaacgtttggcgcaagatgacgaaatcatgtttaaagatgaaaaaatcgcaaga
gatgctgtcagaaaaacatttgctgaagaaatcttccataatccaagaattagacaagaa
gttcgtcagacttacaagatgtacacctcaatcaattttgttgttactgaaaagggtaga
gctaccattgataaccatagtccatatgctgacatcaaatacgctatcaatagagaccca
gttgatttggtcaccaaacctgatgtattgttgagaatgttggaagctgaaaaattgggt
ttaggagttatagtagttgagactagagattacaatagctggtttgaaagtattttcaac
tgtttcaaatcagatggttcttcagacgtttctgaaagatggaacaaagagagagaagtt
gtgttgagaatggcattcaagaaattgtgttccatggttgcattaaataccaaagaagat
cttcgtcgtgaatgtgaaagattgattgccaatcaagtgaaaagaggtcttgttaacaga
attgaccaagcgccactccaagcttttggttttgaatttggttccacagcaaatgttttg
tcaatcacttttggtaaaggtgattttgatagtgctgttattggtgtgtatatgagagac
aatggtaaaattgtccatacactcaagtcaaatgaaaatccaatcagaaatcgtgaaact
gaagacgtttttaaaggatggttccttgagcaatacgataacttgtttagatcagagaag
ccggatgttattgttgtgtctggtttcaatgccaacaccaagaaactttatgacattatt
tgtaatattgtggcagagaacaaacttggaactagtgccgttaaagatgaatacgatgat
aattctgctcctgttcaagttatatggggacaagatgaaactgctcgtttgtatcaaaat
tctgaaagagccagcaaagaattcccagataaaccgccattggttaagtatgcaattgca
ttgggtagatatgtacaagatccattgttggaatatgtaactttaggtgatgacatcttg
tccttgactttccatccacatcaaaaattgatccctacagatttgataaaagaatccatc
gagtccgcatttgttgatatggtcaatcttgttggtgttaagatcaatgatgctacccgt
agtactcgtgtttcacaaatgatgcaatatgtcggtggattgggtcctcgtaaggcatct
ggattgttgagaaatatcaactctcacttgtatggtgttttggtcaatagaagtgctttg
attgaatctgaattgacttccgctaacattttcatcaattgtgcatcttcacttaatgtt
gtggttgacaaaacgattacatcctctgattatggtattgaagttttagattctacaaga
attcatccagaagattatgatttggccaagaaaatggcttctgatgctcttggtattgat
gaagaagacgccatggtcatgaaccaggatggtagaggtggggttgtcagacagttgatt
aaagatgatcctgaaaaacttaatagtttggacttggtttcctttgctcaaagattagaa
gagagatcacacaagaagaagttgcgtacattacaagccattagacaagaattgatcaat
agatatgaagaagctagacaaccattcagaatattgaacaacgatgatgctttctttatc
ttaactggtgaacatgcatatgaattgagaaacacggtggttccaattactattgtcaag
atttctaaaaactacaacgatccatacggaagagtcaagggtatgcgtgttatcacccca
tctttgattcaaggtagaattgatgaaggtcaaattccacaaaatattgaataccaggaa
ggacaagttgtccaaggtgtgttgcttgaattatacactgactctttcacagctgtgttg
agcttgagaaaggaagacattaaaagggcaatggcaccttctgttcaacatcaatatggt
aaatgggatttcgaagcccaagatgctgatatcgctaaagaaagagcaaaagaaaatgcc
aaacttgctaaaaccagaaatgttcaacatccattgttccgtaatttcaactttagacaa
gccgaagaatatttggcgccacaaaaagtgggtgattgtgtgatacgtccatcatccaag
ggaccacagtttttgaccatcacatggaaagtggcacctactttattccagcatcttttg
gttgaagaaagaagtagaggtagatccagagaatattatgtcgaaggtcaaagatatcaa
gacttggatcaattgattttccaacatattcaagttattgctaagaatgtctcatccatg
gttcacaacgggaaattcagagaaggtaccatgactgttgtcaacgaatggttggaatca
tacaccagagccaatccaaagagttcggcttatgccttttgttatgatcataaactgcct
ggtaatttcttgttgttgttcaagatcaacagtaatactaaagtggtaacatggcatgtc
aaaacctgtgttaatgggtacattttgaaaacattcacttatccaaacatgataagttta
tgtaatggtttcaaacaaacagtcaaaaacatgctgcaacctcaaacttacaactacggt
ggttactag
DBGET
integrated database retrieval system
