Candida tropicalis: CTRG_05298
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Entry
CTRG_05298 CDS
T01115
Name
(RefSeq) Poly(A) polymerase PAPalpha
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ctp
Candida tropicalis
Pathway
ctp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CTRG_05298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_05298
Enzymes [BR:
ctp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CTRG_05298
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
CTRG_05298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Polbeta
Motif
Other DBs
NCBI-GeneID:
8299619
NCBI-ProteinID:
XP_002551000
UniProt:
C5MGU4
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MMSTRKYGVTDPISTANPTVKENALNDSLIQELKNRGSFESEQATKKRVEVLTLFQKLVQ
EFVYTVSKSKNMSDGMAKDSGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRDDFFSVF
PDIIRKRPELEEIACVPDAFVPIIKLEFDGISIDLIMARLNVPRVPLEMTLDDKNLLKNL
DEKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVYGFPGGVAWAMLV
ARICQLYPNAVSAVIVEKFFSIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRM
PVITPAYPSMCATHNITSSTQKVILKELSRGSSIMNDINTGNKTWSDLFKRHEYFHAYKF
YLCVVAATVDTSEQHKKWSGFVESRLRQLVLKLEVTDGIEFAHPYVKDFSAAYVLDDNDP
QDIINSYGTLNGDKHLEKLKVTESGEENAEVKNIRLTRFYIALELNVSKSSDGARKLDLQ
YPCTEFYNLCKGSALYDENSNFIQIKNVKLLDLPNDVYVEGEERPKKTSKKRKKNVKEDR
QKRVRNEIPSPVSVNGTE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaccagaaaatatggcgtcactgatcctatttccacagcgaatcctactgtg
aaagaaaatgcattgaatgattctcttattcaggaattgaaaaacaggggatcattcgaa
agcgaacaggcaacgaagaaaagagttgaggtgttgacacttttccaaaagcttgtgcag
gaatttgtttacactgtatcaaagagtaaaaatatgtcagatggtatggcgaaagattca
ggaggaaaggtttttacatttggttcctatagattgggtgtctatggtccaggatctgat
attgatacattggttgtggttccaaagcatgttactagagatgatttctttctggtattt
cctgatattattcgaaaaaggccagaattagaagaaattgcatgtgttccagatgcgttt
gttccaattataaaactagaatttgatggtatatctattgatttaatcatggctagattg
aacgttcctagggttccattggaaatgacattagatgataaaaatttgctaaagaactta
gatgaaaaagatttaagatccttgaacggtacaagagtgacagatgaaatattgcagttg
gttccaaaacctactgtgttcaaacatgctttacgttgcataaaattatgggcacaacaa
agagcagtatatggtaacgtttatggattcccaggtggtgttgcctgggcaatgttggtt
gctaggatttgtcaattatacccaaatgcagtgagtgctgtcattgttgagaagttcttc
agcatttacaccaaatggaattggccagaacctgttttattgaaactgatcgaggatgga
ccccttcaagtacgtgtttggaaccctagattgtatcctcatgatagactccaccgtatg
cctgttatcactcctgcttatccttcaatgtgtgcaactcataacattaccagctccact
caaaaagtcattttgaaagaactttctcgtggatcttctataatgaatgatataaatact
ggaaataaaacatggtctgatttatttaaaagacatgaatatttccacgcgtacaaattt
tatctttgtgttgttgcagcaacagttgatacatcagaacagcataaaaaatggtcagga
tttgtcgaaagtagactaagacaattagttttgaaattagaagtcactgatggaatagaa
ttcgctcacccgtatgttaaggacttttcagcggcatatgtcctagatgacaatgatcca
caagacatcattaatagctacggaacattaaatggtgacaagcacttagagaaattgaag
gttactgagtctggggaagaaaatgctgaagttaagaatatccgtttaactcggttttac
attgcattagaacttaatgtgtcgaagtcttcggatggagcaagaaaacttgatttgcag
tatccttgtactgagttctacaatttatgcaaaggatcagctttatatgatgagaattcc
aattttatccagattaagaatgtaaaattgcttgatttgccaaacgatgtttatgtagaa
ggggaggaacgaccaaagaaaactagcaagaagagaaagaagaatgtgaaagaagaccgt
cagaaaagagtgaggaatgaaataccatcgcctgtctcagtaaatggaactgaatag
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