KEGG   Candida tropicalis: CTRG_05612
Entry
CTRG_05612        CDS       T01115                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
ctp  Candida tropicalis
Pathway
ctp03040  Spliceosome
ctp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CTRG_05612
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CTRG_05612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ctp03041]
    CTRG_05612
   04121 Ubiquitin system [BR:ctp04121]
    CTRG_05612
   03400 DNA repair and recombination proteins [BR:ctp03400]
    CTRG_05612
Enzymes [BR:ctp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     CTRG_05612
Spliceosome [BR:ctp03041]
 Complex B
  Other components
   Prp19 complex
    CTRG_05612
 Complex C
   Prp19-CDC5 complex
    CTRG_05612
Ubiquitin system [BR:ctp04121]
 Ubiquitin ligases (E3)
  U-box type E3
   CTRG_05612
DNA repair and recombination proteins [BR:ctp03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    CTRG_05612
SSDB
Motif
Pfam: Prp19 WD40_Prp19 U-box zf-Nse GAGA_bind ANAPC4_WD40 Big-like Rtf2 EIF3I Chalcone_3 zf-NOSIP
Other DBs
NCBI-GeneID: 8300825
NCBI-ProteinID: XP_002551314
UniProt: C5MHR9
LinkDB
Position
Unknown
AA seq 489 aa
MICSISGEPVKEPVVSPKSGAIFEKKHIINYISTSGTDPITDEPLTEDELITIKTTENSS
TIAPPQLPTSSNTSIPALLSTFQNEWDALVLEMFTLRKQLNRAREELSIALYKQDAAINV
AAKAIRERDEAKEALEMLTSSLSVRDEPMNDVIEDSKEDNSVNKMQELEKITNARDELFK
VHKSQKVKFPFDVDTVVKLELTNKKDVFESEKVSQYSYNKNIKTIVGVCENSIIKQSFID
GVTSYFETAKPELAAISNNGVIAAVSSNIVTFSTTESSIPLTGEPKQIIPHSSLDIFIII
TDKNWMVVNTKCALVTHNIVLSSAALHYDGEILAAQVDSEIQLFSIISGDQLGKFSVGYN
NVVKIEFASNGYWLLVLSVEKSTSLIQIFDLRKGTEAHKLDFNDTVLNFIIDPTTSALLT
FTKKMYTISRYTKKTKSWSQGEPENLDASFNPTHIELCTTVSDILDNNPIEVFTVDLKKN
SLVYSEISK
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgatttgttcaatatcaggagaaccggttaaagaaccagttgtttccccaaagagtggg
gctatatttgaaaagaaacatataattaattacatatcaacaagtggaaccgatcccata
actgatgaaccattgacagaagatgaactaattacaataaaaacaacagaaaactcgagc
accattgccccaccacaacttcctacttcatcaaacacatctattcctgcattactttct
acatttcagaatgaatgggatgccttagtattagaaatgttcacattaagaaaacaatta
aatcgtgccagagaagaacttagtatcgccttgtataaacaagatgctgctattaatgta
gctgccaaggcaataagagaacgcgatgaagcaaaagaagcattggaaatgctaaccctg
tcattaagcgtgagagatgaaccaatgaatgatgtaattgaagatagcaaagaagacaat
ctggtgaataagatgcaagagttggaaaaaattaccaatgctagggatgaacttttcaaa
gtacataaatcacaaaaagtcaagtttccatttgatgtggataccgttgttaaattagag
ttgactaataaaaaggatgtatttgagtctgaaaaagtttcacaatattcatacaataaa
aacatcaagactattgtgggggtatgtgaaaattcgataatcaagcaaagtttcattgat
ggagtgacttcatattttgaaactgccaaacctgaattagcggctatatccaacaacggt
gttattgcagctgtttcttcaaacattgtaacattttctactactgaaagttccattcca
ttgacaggtgaacctaagcaaataataccccatctgtcgctagacattttcattattatt
acagataaaaattggatggttgtaaacacaaagtgtgcattagtcacacacaacatcgtc
ttatcatcagcagcacttcattatgacggagaaattttggctgcacaagttgatagtgaa
atccaattatttagtataatatctggcgatcaattaggtaaatttagtgttggttacaat
aacgtcgtcaaaattgaatttgctagcaatgggtactggttacttgtgttgtctgtcgaa
aagtctacaagtttgatacaaatttttgatttaagaaaaggaacagaagctcacaaactc
gatttcaatgatacagtacttaattttatcattgatccaacaacaagtgcccttttgact
tttactaagaaaatgtacactatttccagatataccaaaaaaaccaaatcttggtcacaa
ggtgaacctgaaaatttggatgcttcattcaatccaacacatattgaattatgtaccaca
gtttctgatatacttgataataacccaattgaagttttcacagtagacttgaagaagaac
tcattggtatatagtgaaataagtaaatag

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