Candida tropicalis: CTRG_05883
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Entry
CTRG_05883 CDS
T01115
Name
(RefSeq) ATP-dependent rRNA helicase RRP3
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
ctp
Candida tropicalis
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctp03009
]
CTRG_05883
03029 Mitochondrial biogenesis [BR:
ctp03029
]
CTRG_05883
Enzymes [BR:
ctp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CTRG_05883
Ribosome biogenesis [BR:
ctp03009
]
Eukaryotic type
90S particles
Helicases
CTRG_05883
Mitochondrial biogenesis [BR:
ctp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
CTRG_05883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
8300232
NCBI-ProteinID:
XP_002546405
UniProt:
C5MIJ0
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSSKGVSKKKVKPSKTIDATKKLAEKIKQQALKKQQEKESSSSTTTSTPEPSSSSITTID
PDAELKFKTFKELNLVPDLLESIENMKFTKPTPIQSESIPHALEGKDIIGLAQTGSGKTA
AFAIPILQSLWHAQQPYFGLVLAPTRELAFQIKETFDALGSSMGLRSSCIVGGMDMMDQA
RDLMRKPHIIVATPGRIMDHLEHTKGFTLKNLKYLVMDEADRLLDMDFGPALDKILKVIP
TKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLVQSMMLVNDGYKNTILIH
LLNEFMSKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNTANI
LIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYL
RIESVLGYKLPKEDKPPKEVLDALHIHVDKATAEAIRQTKELHEKRGGNNRRRNKDDADR
EER
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctaaaggtgtatctaaaaagaaagtaaaaccatcaaaaaccatcgatgcaact
aaaaaattagcagaaaagatcaaacaacaagcattaaagaaacaacaagaaaaagaatca
tcatcatctacaaccacatcaactccagaaccaagttcatcatcgataacaactattgat
ccagatgctgaattaaaatttaaaacatttaaagaattaaatcttgttccggatttatta
gaatctattgaaaatatgaaattcactaaaccaacaccaattcaatcagaatctattcct
catgcattagaaggtaaagatattattggattagcacaaacaggttcgggtaaaactgca
gcatttgctatacctatattacaatccttatggcatgctcaacaaccttattttggatta
gttttagcacctactagagaattagcatttcaaattaaagaaacttttgatgctttaggt
agttcaatgggattaagatcaagttgtattgttggaggtatggatatgatggatcaagca
agagatttaatgagaaaacctcatattattgttgccacacctggtagaataatggatcat
ttagaacatactaaaggatttacattgaaaaatttgaaatatttagttatggatgaagct
gatagattattagatatggattttggaccagctttagataagattttaaaagttattcca
actaagagaacaacttatttattttcagcaacaatgactaataaaattgaaaaattacaa
agagcttcattacataatccagtaagagttgcagtatcttcaaaatatcaaactgctgat
aatttagtacaatcaatgatgttagttaatgatggatataaaaatactattttaattcat
ttattaaatgaatttatgagtaaatcaattattgtatttacaagaactgtggcacatgca
caaagaactgcattacttgcaagaattttaggatttaatgctgttccattacatggtcaa
ttatctcaatcacaaagattaggttcattaaataaatttaaatcaaatactgcaaatatt
ttaattgctactgatgttgccgctagaggtttagatattccttctgttgatgttgttata
aattatgatattcctactgattcaaaagcttatattcatagagttggtagaactgcaaga
gctggtagatcaggtaaatccatttctttaattactcaatatgatttagaaatgtattta
cgtatcgaaagtgtattgggttataaattaccaaaagaagataaacctccaaaagaagta
ttggatgctttacatatacatgttgataaagctacagctgaagctattcgacaaactaaa
gaattacatgaaaaaagaggtggtaataatagaagaagaaataaagatgatgctgataga
gaagaaagataa
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