Candida tropicalis: CTRG_05904
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Entry
CTRG_05904 CDS
T01115
Name
(RefSeq) predicted protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ctp
Candida tropicalis
Pathway
ctp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CTRG_05904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctp03041
]
CTRG_05904
Spliceosome [BR:
ctp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CTRG_05904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
PRP4
WDR90_beta-prop_4th
NBCH_WD40
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
8296019
NCBI-ProteinID:
XP_002546426
UniProt:
C5MIL1
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MDFKDIPVINDNIVPESDEEIRQQLKNLGQPMVLPGEDDEARKQRLITLTTDQDMMEGEE
DEEEDNEEFYTPGPSELYDVRLKILKSSLIKASTRLDLEKEMNSFDYTYYLKQRRNLNLK
ASKFELFGSQMIKGNTRAISTVRFSPNDEFIASGSWDGSICIMNSKDLSTFSFIPNGYHS
EKVTLDWDMNSNKNVFASGGNEGNLNIWEVSESQLKPSVSIKQAHDQRITKSIFHPINDY
LVTSSSDKTWKLWDINNEKELMVQEGHTSEVISCSIHQDGSLLFSAGKEGRSFCWDLRSG
RSVFTLRSCWRADFCNNHLVTGDANGVLQVMDLRKNDQALQDIPAHTKPISDVHFYHQRG
ESNDKEANGKLLISSSFDGNVNIWSVDNWIKVKSLKGHDRSMSCDINGAGDSIVSSGWDR
TVKLWNI
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaagatataccagttatcaatgataatattgtacctgaatcagatgaagaa
ataagacaacaattaaaaaaccttggtcagccaatggtactccccggggaagacgatgag
gcaagaaaacaacgattaataactttaaccacagatcaagatatgatggaaggggaagaa
gatgaagaagaggataatgaagaattttatactcctggaccttcagaattatatgatgta
cgattgaagatattaaagagctcattgattaaagcatcaacaagattagatttagagaaa
gaaatgaatctgtttgactacacatattatttaaaacaacgaaggaatttgaatttaaaa
gcatcaaaatttgaattatttggatcacaaatgattaaagggaatacaagggcgatttca
actgttagattttcacctaatgatgaatttattgctagtggatcatgggatggatctatt
tgtattatgaatagtaaagatttatccacattttcatttattcccaatggatatcattct
gaaaaagtcacactagattgggatatgaatagcaataagaatgtttttgcatctggtgga
aatgaaggaaatttaaatatttgggaagtatctgaatcacaattaaaaccaagtgtatct
attaaacaagcacatgatcagagaataacaaaatcaatattccatccaattaatgactat
cttgttacttcgtcatctgataaaacttggaaattatgggatataaataatgaaaaggaa
ttaatggttcaagaaggacatacgagtgaagttatttcttgctcaatacatcaagatggt
agtttgctatttagtgcaggtaaagaaggtagatccttctgttgggatttaagaagcggg
agatcagtatttacattgaggagttgttggagagctgatttttgtaataatcatttagtc
acaggagatgcaaatggagtattacaagtaatggatttgagaaagaatgatcaagcatta
caagatataccagctcatactaaacctatttcagatgtacacttttatcatcaaagaggt
gaatctaatgacaaggaggccaatgggaaactcttgatctcttcaagtttcgatgggaat
gttaacatatggtcagtcgataattggataaaagtgaagtcattaaaaggtcatgataga
tcgatgagttgtgatataaatggagcaggtgattctattgtaagtagtggttgggataga
accgttaaactatggaacatatag
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