KEGG   Candida tropicalis: CTRG_05904
Entry
CTRG_05904        CDS       T01115                                 
Name
(RefSeq) predicted protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ctp  Candida tropicalis
Pathway
ctp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CTRG_05904
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ctp03041]
    CTRG_05904
Spliceosome [BR:ctp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    CTRG_05904
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EIPR1 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_SCAP Beta-prop_TEP1_C PRP4 WDR90_beta-prop_4th NBCH_WD40 WD_LRWD1 Beta-prop_WDR19_1st Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 8296019
NCBI-ProteinID: XP_002546426
UniProt: C5MIL1
LinkDB
Position
Unknown
AA seq 427 aa
MDFKDIPVINDNIVPESDEEIRQQLKNLGQPMVLPGEDDEARKQRLITLTTDQDMMEGEE
DEEEDNEEFYTPGPSELYDVRLKILKSSLIKASTRLDLEKEMNSFDYTYYLKQRRNLNLK
ASKFELFGSQMIKGNTRAISTVRFSPNDEFIASGSWDGSICIMNSKDLSTFSFIPNGYHS
EKVTLDWDMNSNKNVFASGGNEGNLNIWEVSESQLKPSVSIKQAHDQRITKSIFHPINDY
LVTSSSDKTWKLWDINNEKELMVQEGHTSEVISCSIHQDGSLLFSAGKEGRSFCWDLRSG
RSVFTLRSCWRADFCNNHLVTGDANGVLQVMDLRKNDQALQDIPAHTKPISDVHFYHQRG
ESNDKEANGKLLISSSFDGNVNIWSVDNWIKVKSLKGHDRSMSCDINGAGDSIVSSGWDR
TVKLWNI
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggattttaaagatataccagttatcaatgataatattgtacctgaatcagatgaagaa
ataagacaacaattaaaaaaccttggtcagccaatggtactccccggggaagacgatgag
gcaagaaaacaacgattaataactttaaccacagatcaagatatgatggaaggggaagaa
gatgaagaagaggataatgaagaattttatactcctggaccttcagaattatatgatgta
cgattgaagatattaaagagctcattgattaaagcatcaacaagattagatttagagaaa
gaaatgaatctgtttgactacacatattatttaaaacaacgaaggaatttgaatttaaaa
gcatcaaaatttgaattatttggatcacaaatgattaaagggaatacaagggcgatttca
actgttagattttcacctaatgatgaatttattgctagtggatcatgggatggatctatt
tgtattatgaatagtaaagatttatccacattttcatttattcccaatggatatcattct
gaaaaagtcacactagattgggatatgaatagcaataagaatgtttttgcatctggtgga
aatgaaggaaatttaaatatttgggaagtatctgaatcacaattaaaaccaagtgtatct
attaaacaagcacatgatcagagaataacaaaatcaatattccatccaattaatgactat
cttgttacttcgtcatctgataaaacttggaaattatgggatataaataatgaaaaggaa
ttaatggttcaagaaggacatacgagtgaagttatttcttgctcaatacatcaagatggt
agtttgctatttagtgcaggtaaagaaggtagatccttctgttgggatttaagaagcggg
agatcagtatttacattgaggagttgttggagagctgatttttgtaataatcatttagtc
acaggagatgcaaatggagtattacaagtaatggatttgagaaagaatgatcaagcatta
caagatataccagctcatactaaacctatttcagatgtacacttttatcatcaaagaggt
gaatctaatgacaaggaggccaatgggaaactcttgatctcttcaagtttcgatgggaat
gttaacatatggtcagtcgataattggataaaagtgaagtcattaaaaggtcatgataga
tcgatgagttgtgatataaatggagcaggtgattctattgtaagtagtggttgggataga
accgttaaactatggaacatatag

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