Candida tropicalis: CTRG_05957
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Entry
CTRG_05957 CDS
T01115
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ctp
Candida tropicalis
Pathway
ctp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTRG_05957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_05957
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CTRG_05957
mRNA degradation factors
5'-3' decay
Lsm complex
CTRG_05957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
8296074
NCBI-ProteinID:
XP_002546479
UniProt:
C5MIR4
LinkDB
All DBs
Position
Unknown
AA seq
168 aa
AA seq
DB search
MSSASPQQQQQVRSSDPIGPNVEDLYLESYAFTTAAAIVGAVDRKIFVLLRDGRNLFGIL
RTFDQFANLVLQDTFERIYLQEEGEAPARFGEVYRGVFMVRGENVVMMGELDIDREDDHL
EKLQQISFEQAEHELKMKHQTRIKEEKVKTKNLLQTGLINDFYKTDMY
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgcttcacctcaacaacagcaacaagttcgatcttctgatccaataggtcct
aatgttgaagatttatatttggaaagttatgcattcaccactgccgcagccattgttggt
gcggtagatcgaaagatatttgtcttgttaagagatggaagaaatctttttggtatattg
agaacttttgaccaatttgcaaatctagtattacaagacacgtttgaaagaatatattta
caagaagaaggggaagcaccagctcgtttcggtgaagtatatcgtggagtatttatggtt
agaggggaaaatgttgttatgatgggtgaattggatattgatagagaagatgatcatttg
gaaaagttacaacaaatttcatttgaacaagccgaacatgaattgaaaatgaaacaccaa
acaaggataaaagaagaaaaggtgaaaacgaaaaacttgttacaaacaggacttattaat
gatttttacaaaacagatatgtattaa
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