KEGG   Candida tropicalis: CTRG_05957
Entry
CTRG_05957        CDS       T01115                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
ctp  Candida tropicalis
Pathway
ctp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CTRG_05957
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctp03019]
    CTRG_05957
Messenger RNA biogenesis [BR:ctp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CTRG_05957
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CTRG_05957
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 8296074
NCBI-ProteinID: XP_002546479
UniProt: C5MIR4
LinkDB
Position
Unknown
AA seq 168 aa
MSSASPQQQQQVRSSDPIGPNVEDLYLESYAFTTAAAIVGAVDRKIFVLLRDGRNLFGIL
RTFDQFANLVLQDTFERIYLQEEGEAPARFGEVYRGVFMVRGENVVMMGELDIDREDDHL
EKLQQISFEQAEHELKMKHQTRIKEEKVKTKNLLQTGLINDFYKTDMY
NT seq 507 nt   +upstreamnt  +downstreamnt
atgtccagtgcttcacctcaacaacagcaacaagttcgatcttctgatccaataggtcct
aatgttgaagatttatatttggaaagttatgcattcaccactgccgcagccattgttggt
gcggtagatcgaaagatatttgtcttgttaagagatggaagaaatctttttggtatattg
agaacttttgaccaatttgcaaatctagtattacaagacacgtttgaaagaatatattta
caagaagaaggggaagcaccagctcgtttcggtgaagtatatcgtggagtatttatggtt
agaggggaaaatgttgttatgatgggtgaattggatattgatagagaagatgatcatttg
gaaaagttacaacaaatttcatttgaacaagccgaacatgaattgaaaatgaaacaccaa
acaaggataaaagaagaaaaggtgaaaacgaaaaacttgttacaaacaggacttattaat
gatttttacaaaacagatatgtattaa

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