Candida tropicalis: CTRG_06076
Help
Entry
CTRG_06076 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K18748
protein SSD1
Organism
ctp
Candida tropicalis
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_06076
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
CTRG_06076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
CSD2
Rrp44_CSD1
Motif
Other DBs
NCBI-GeneID:
8298725
NCBI-ProteinID:
XP_002546598
UniProt:
C5MJ33
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MSSSNNNNNNNTPARVSSRKGKNLHVAHRRSPSELTNLMVEQYNLQRQLEQVQAQQKLLE
EQQKQQQQQFVYPPPQQGQGELLPPPSSPGFGGNNRGSHSRSSSINSHRRTGSGGANTAH
GHSRRHSLGLNEAIKAAANQRQNNRTSTLSPSVPNESKIDSNDAIGSFKFPPSSNSDDAP
ASPEPTSHNRSRSLAYGQQPFKFPPTPDQSNESRGNSLLPPNPNFTVTQSPDRGHNRRSS
HFRSRSRGGGSNAEGMNSNWRAQQQSPQQQQQNHNRQSSTLEPPQAGFVPGHKPRNSSYG
GGSSVSSLSHFLPSNGGSQISSHQQGGGAGGPNIGLNSNNGRKTLFAPYLPQSSLPELIN
EGRLVTGTLRVNKKNRSDAYVSTDGLLDADIFICGSKDRNRALEGDLVAVELLIVDEVWE
SKKEKEEKKRRKDNTLTNRPLTDDIHNDATSAPTTAEGSTTGNSKGDGASNEEENNNGLA
RRGSLKQRPTMKKNDDVEVEGQSLLLVEEEEINDEVKPLYAGHVVAVVDRIPGQLFAGTL
GLLRPAQAAQAARDKKNGNESSVQTPKAPKIVWFKPTDKKVPLIAIPTEQAPKDFVENHE
KYADQLFVASIKRWPITSLHPFGTLVSKLGPIDSSETEIDSILRDNNFLCDEYPDDNDDE
ATIAANIYDLPSIEPEFENTKRAEYLNDYIIAFTQTGGFVDHALHVKRISNTKIELGFHV
VDISYFIKPGSTLDRKSKKRSSSVFLPQKVVNLFPNQVNKLVSFKENEKNLAISVVFEID
TSNFEVEDLYIHESIIVPKQLVSYDSFDTILSGKSVDSISSATSDYIKTFSLIAKEFRRH
RLANRSLGISPNLTLLDQLDDEKVRLDLNVFKDSLAFDVISEISHKVNSAIAAKVHAGLG
DQAILRRHPLPTLQKMETFVRKATNLGFKIDTTTSSTLQNSILKIEDPVKRKCVETLLYK
CMSRGRYYVAGKQDADSYAHYYFNLPLYTHFNAPLRRYADLIVHRQLKMVLNKESEEKDL
DSLKAIADYCNFKKDCAANAQEQAIHLLLSQTINEMSESAGQLLCMGTVVQVYESSFDVF
LPEFGVEKRVHGDQLPLVKAEFDKVDRILELYWEKGVDSATYIPPDEKSSLSYRNSIKNK
YRTSALQAAKIQSKSSLTSSTIASDSIAEKLAKLNLDAPKLTVPPLKGNDEFKEVDNIKD
ETHSMPSSPTQSDIPKNIRTSSSSTIQATSDSIGLAPYLQECITRVEGDSHIQVIKELTQ
VPVLLRAEIGMALPCLTVRVLNPFAEEH
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatctaataacaacaataacaacaacactcctgctagagtgtcaagtagaaag
ggaaagaatttgcacgtcgctcacagacgttccccttcagaattgaccaatttgatggtt
gagcaatataatttgcaacgtcaattggaacaagtccaagcacaacaaaaacttttggag
gaacaacaaaagcaacaacaacaacaatttgtttacccacctcctcaacaaggtcaaggt
gaattgttaccaccaccatcatcaccaggatttggtggtaacaatcgtggatcccattcc
agatcatcatcaattaattcacatagacgtactggatccggtggtgccaatactgctcat
ggtcactcaagaagacactctttgggcttaaatgaagctatcaaagcagctgcaaaccaa
agacaaaataatagaacatctactttaagtccaagtgttccaaatgaatcgaagattgat
tccaatgatgctattggtagttttaagtttccaccaagcagcaacagtgatgacgcacca
gcaagcccagagccaacttcccataaccgttcaagatctttggcatatggtcaacaacca
tttaaatttccgccaaccccagatcaatcgaacgaatcgagagggaacagtttattacct
ccaaatcctaatttcactgttactcaatctccagacaggggtcataacagaagatcttca
cattttaggtccagatcacgcggtggaggcagcaacgccgagggcatgaattcaaactgg
cgtgctcaacaacaatcacctcaacaacaacagcagaaccacaacaggcaatcatccaca
ttggaaccaccacaagccgggtttgtaccaggtcataagccacgtaacagttcctatgga
ggtggctcatcagtttcttcattgctgcatttcctcccttccaatggtggttcccaaatt
agttcacaccaacaaggcggtggtgccggtggcccaaatattggtctcaatagcaacaat
ggacgtaagacacttttcgctccttacttgccacaatcatccttaccagaattaattaat
gaaggtcgtttggttactggtactttgagagttaacaagaaaaacagatcagacgcctat
gtctccaccgacggtttgttggatgctgatattttcatttgtggttctaaagatcgtaat
cgtgcattagaaggagatttagttgctgttgaattgttgattgttgatgaagtttgggaa
tccaaaaaggaaaaagaagaaaaaaagagaagaaaagacaacacattaaccaacagacca
ttgactgatgatattcataatgatgcaacttccgcaccaactactgccgaaggatccacc
actggcaactctaaaggtgatggtgcttccaatgaagaagagaataacaatggcctcgca
agaagaggttcattaaaacagagaccaactatgaagaagaatgacgatgttgaagttgaa
ggtcaatccttgttattggttgaagaagaagaaattaatgatgaagtcaagccactctac
gcgggtcatgttgtggctgttgtggatagaattccagggcaattgtttgccggtactttg
ggtttgttgagaccagcacaagctgcccaagccgctagagataagaagaatggtaacgaa
tcttctgttcaaactccaaaagctccaaagattgtgtggtttaaaccaactgataagaag
gttcctttgattgccattccaactgagcaagcaccaaaggattttgttgaaaaccacgag
aaatatgccgatcaattgtttgttgcctctatcaagagatggccaatcacctccttgcat
ccatttggtacattggttagcaagttaggaccaattgattcttctgaaaccgaaattgac
tcgatcttaagagacaacaactttttatgtgacgaataccctgatgataacgatgatgaa
gctacgattgcagcaaatatttatgatttaccttcaattgaaccagaatttgaaaatact
aagagagcagaatacttgaatgactacattattgcatttacacaaactggtggatttgtt
gatcatgcattgcatgtcaagagaatttcgaataccaagattgagttgggattccatgtt
gtggatatttcatactttatcaaacctggttctactttggaccgtaagtccaaaaagaga
tcctcatcagtgttccttcctcagaaagttgtcaaccttttccctaaccaagttaacaaa
ttggtatcttttaaagagaacgaaaagaatttagctatctctgttgtttttgaaattgat
actagtaattttgaagttgaggatttgtacattcatgaatctattattgttccaaaacaa
ttggttagttatgattcatttgatactattttactgggtaaatctgtggatagtatttct
tcagccacttctgactacataaaaacatttagtttgattgctaaggaattccgtcgtcat
cgtttagctaaccgttcacttggaatcagtccaaacttgactttgttagatcaattagat
gatgaaaaggttcgtttggatttgaatgtatttaaggattcattggcatttgatgtaatt
tctgaaatttcccataaggtgaattctgctattgctgctaaggtacacgcaggtttgggt
gaccaagccatcttgcgtcgtcatccattgccaactttacaaaaaatggaaacatttgtt
agaaaagccaccaatttgggattcaagattgacaccaccacctcatctactttacaaaac
tcaatcttgaaaattgaggatccagtcaagagaaagtgtgttgagacattgttgtacaag
tgtatgtctagaggtagatactatgtcgccggtaaacaagatgcagacagttatgcacac
tattactttaatttgccattatacacccatttcaatgctccattgagacgttatgccgat
ttgattgtgcatagacaattgaagatggttttgaataaggaatccgaagaaaaagatttg
gattctttgaaggcaattgcagattactgtaatttcaagaaagattgtgcagccaatgct
caagagcaagccattcacttgttgttgtctcaaactattaatgaaatgagtgaaagtgct
ggtcaattgttgtgcatgggtactgttgttcaagtttatgaatcgtcatttgatgttttc
cttccagagtttggcgttgaaaagagagttcacggtgatcaattgccattagttaaagct
gaatttgataaagttgacagaatattagagctttactgggaaaagggtgtggattctgct
acttatattccaccggatgaaaaatcatctttgtcatacagaaactcgatcaagaacaag
tacagaacatctgcattacaagctgctaagattcagagtaagagttctttaacttcgagt
accattgcatctgattctattgctgagaaattagctaaattgaatttggatgcaccaaaa
ttaactgttcctccattaaaaggaaatgatgaattcaaagaggttgacaatattaaagat
gaaacacattccatgccatcatcaccaactcaatctgatattcctaagaacattagaacc
agttcctcatctactatacaggccaccagtgattctattggcttagcaccatatttgcaa
gaatgtataaccagagttgaaggagattcacatattcaagtaattaaggaattgacccaa
gttccagtattgttgagagctgaaattggtatggcattaccatgtttaacagtcagagta
ttgaatccatttgcagaggaacattaa
DBGET
integrated database retrieval system
