Chlamydia trachomatis D/UW-3/CX: CT_413
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Entry
CT_413 CDS
T00017
Symbol
pmpB
Name
(RefSeq) outer membrane protein PmpB
Organism
ctr
Chlamydia trachomatis D/UW-3/CX
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ChlamPMP_M
Chlam_PMP
Autotransporter
KIAA1549
Motif
Other DBs
NCBI-GeneID:
884703
NCBI-ProteinID:
NP_219923
UniProt:
O84418
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All DBs
Position
474342..479597
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AA seq
1751 aa
AA seq
DB search
MKWLSATAVFAAVLPSVSGFCFPEPKELNFSRVGTSSSTTFTETVGEAGAEYIVSGNASF
TKFTNIPTTDTTTPTNSNSSSSNGETASVSEDSDSTTTTPDPKGGGAFYNAHSGVLSFMT
RSGTEGSLTLSEIKITGEGGAIFSQGELLFTDLTGLTIQNNLSQLSGGAIFGESTISLSG
ITKATFSSNSAEVPAPVKKPTEPKAQTASETSGSSSSSGNDSVSSPSSSRAEPAAANLQS
HFICATATPAAQTDTETSTPSHKPGSGGAIYAKGDLTIADSQEVLFSINKATKDGGAIFA
EKDVSFENITSLKVQTNGAEEKGGAIYAKGDLSIQSSKQSLFNSNYSKQGGGALYVEGDI
NFQDLEEIRIKYNKAGTFETKKITLPKAQASAGNADAWASSSPQSGSGATTVSNSGDSSS
GSDSDTSETVPATAKGGGLYTDKNLSITNITGIIEIANNKATDVGGGAYVKGTLTCENSH
RLQFLKNSSDKQGGGIYGEDNITLSNLTGKTLFQENTAKEEGGGLFIKGTDKALTMTGLD
SFCLINNTSEKHGGGAFVTKEISQTYTSDVETIPGITPVHGETVITGNKSTGGNGGGVCT
KRLALSNLQSISISGNSAAENGGGAHTCPDSFPTADTAEQPAAASAATSTPESAPVVSTA
LSTPSSSTVSSLTLLAASSQASPATSNKETQDPNADTDLLIDYVVDTTISKNTAKKGGGI
YAKKAKMSRIDQLNISENSATEIGGGICCKESLELDALVSLSVTENLVGKEGGGLHAKTV
NISNLKSGFSFSNNKANSSSTGVATTASAPAAAAASLQAAAAAVPSSPATPTYSGVVGGA
IYGEKVTFSQCSGTCQFSGNQAIDNNPSQSSLNVQGGAIYAKTSLSIGSSDAGTSYIFSG
NSVSTGKSQTTGQIAGGAIYSPTVTLNCPATFSNNTASMATPKTSSEDGSSGNSIKDTIG
GAIAGTAITLSGVSRFSGNTADLGAAIGTLANANTPSATSGSQNSITEKITLENGSFIFE
RNQANKRGAIYSPSVSIKGNNITFNQNTSTHDGSAIYFTKDATIESLGSVLFTGNNVTAT
QASSATSGQNTNTANYGAAIFGDPGTTQSSQTDAILTLLASSGNITFSNNSLQNNQGDTP
ASKFCSIAGYVKLSLQAAKGKTISFFDCVHTSTKKIGSTQNVYETLDINKEENSNPYTGT
IVFSSELHENKSYIPQNAILHNGTLVLKEKTELHVVSFEQKEGSKLIMKPGAVLSNQNIA
NGALVINGLTIDLSSMGTPQAGEIFSPPELRIVATTSSASGGSGVSSSIPTNPKRISAAA
PSGSAATTPTMSENKVFLTGDLTLIDPNGNFYQNPMLGSDLDVPLIKLPTNTSDVQVYDL
TLSGDLFPQKGYMGTWTLDSNPQTGKLQARWTFDTYRRWVYIPRDNHFYANSILGSQNSM
IVVKQGLINNMLNNARFDDIAYNNFWVSGVGTFLAQQGTPLSEEFSYYSRGTSVAIDAKP
RQDFILGAAFSKMVGKTKAIKKMHNYFHKGSEYSYQASVYGGKFLYFLLNKQHGWALPFL
IQGVVSYGHIKHDTTTLYPSIHERNKGDWEDLGWLADLRISMDLKEPSKDSSKRITVYGE
LEYSSIRQKQFTEIDYDPRHFDDCAYRNLSLPVGCAVEGAIMNCNILMYNKLALAYMPSI
YRNNPVCKYRVLSSNEAGQVICGVPTRTSARAEYSTQLYLGPFWTLYGNYTIDVGMYTLS
QMTSCGARMIF
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggctgtcagctactgcggtgtttgctgctgttctcccctcagtttcagggttt
tgcttcccagaacctaaagaattaaatttctctcgcgtaggaacttcttcctctaccact
tttactgaaacagttggagaagctggggcagaatatatcgtctctggtaacgcatctttc
acaaaatttaccaacattcctactaccgatacaacaactcccacgaactcaaactcctct
agctctaacggagagactgcttccgtttctgaggatagtgactctacaacaacgactcct
gatcctaaaggtggcggcgccttttataacgcgcactccggagttttatcctttatgaca
cgatcaggaacagaaggttccttaactctgtctgagataaaaataactggtgaaggcggt
gctatcttctctcaaggagagctgctatttacagatctgacaggtctaaccatccaaaat
aacttatcccagctatccggaggagcgatttttggagaatctacaatctccctatcaggg
attactaaagcgactttctcctccaactctgcagaagttcctgctcctgttaagaaacct
acagaacctaaagctcaaacagcaagcgaaacgtcgggttctagtagttctagcggaaat
gattcggtgtcttcccccagttccagtagagctgaacccgcagcagctaatcttcaaagt
cactttatttgtgctacagctactcctgctgctcaaaccgatacagaaacatcaactccc
tctcataagccaggatctgggggagctatctatgctaaaggcgaccttactatcgcagac
tctcaagaggtactattctcaataaataaagctactaaagatggaggagcgatctttgct
gagaaagatgtttctttcgagaatattacatcattaaaagtacaaactaacggtgctgaa
gaaaagggaggagctatctatgctaaaggtgacctctcaattcaatcttctaaacagagt
ctttttaattctaactacagtaaacaaggtggtggggctctatatgttgaaggagatata
aacttccaagatcttgaagaaattcgcattaagtacaataaagctggaacgttcgaaaca
aaaaaaatcactttaccaaaagctcaagcatctgcaggaaatgcagatgcttgggcctct
tcctctcctcaatctggttctggagcaactacagtctccaactcaggagactctagctct
ggctcagactcggatacctcagaaacagttccagccacagctaaaggcggtgggctttat
actgataagaatctttcgattactaacatcacaggaattatcgaaattgcaaataacaaa
gcgacagatgttggaggtggtgcttacgtaaaaggaacccttacttgtgaaaactctcac
cgtctacaatttttgaaaaactcttccgataaacaaggtggaggaatctacggagaagac
aacatcaccctatctaatttgacagggaagactctattccaagagaatactgccaaagaa
gagggcggtggactcttcataaaaggtacagataaagctcttacaatgacaggactggat
agtttctgtttaattaataacacatcagaaaaacatggtggtggagcctttgttaccaaa
gaaatctctcagacttacacctctgatgtggaaacaattccaggaatcacgcctgtacat
ggtgaaacagtcattactggcaataaatctacaggaggtaatggtggaggcgtgtgtaca
aaacgtcttgccttatctaaccttcaaagcatttctatatccgggaattctgcagctgaa
aatggtggtggagcccacacatgcccagatagcttcccaacggcggatactgcagaacag
cccgcagcagcttctgccgcgacgtctactcccgagtctgccccagtggtctcaactgct
ctaagcacaccttcatcttctaccgtctcttcattaaccttactagcagcctcttcacaa
gcctctcctgcaacctctaataaggaaactcaagatcctaatgctgatacagacttattg
atcgattatgtagttgatacgactatcagcaaaaacactgctaagaaaggcggtggaatc
tatgctaaaaaagccaagatgtcccgcatagaccaactgaatatctctgagaactccgct
acagagataggtggaggtatctgctgtaaagaatctttagaactagatgccctagtctcc
ttatctgtaacagagaaccttgttgggaaagaaggtggaggcttacatgctaaaactgta
aatatttctaatctgaaatcaggcttctctttctcgaacaacaaagcaaactcctcatcc
acaggagtcgcaacaacagcttcagcacctgctgcagctgctgcttccctacaagcagcc
gcagcagccgtaccatcatctccagcaacaccaacttattcaggtgtagtaggaggagct
atctatggagaaaaggttacattctctcaatgtagcgggacttgtcagttctctgggaac
caagctatcgataacaatccctcccaatcatcgttgaacgtacaaggaggagccatctat
gccaaaacctctttgtctattggatcttccgatgctggaacctcctatattttctcgggg
aacagtgtctccactgggaaatctcaaacaacagggcaaatagcgggaggagcgatctac
tcccctactgttacattgaattgtcctgcgacattctctaacaatacagcctctatggct
acaccaaagacttcttctgaagatggatcctcaggaaattctattaaagataccattgga
ggagccattgcagggacagccattaccctatctggagtctctcgattttcagggaatacg
gctgatttaggagctgcaataggaactctagctaatgcaaatacacccagtgcaactagc
ggatctcaaaatagcattacagaaaaaattactttagaaaacggttcttttatttttgaa
agaaaccaagctaataaacgtggagcgatttactctcctagcgtttccattaaagggaat
aatattaccttcaatcaaaatacatccactcatgatggaagtgctatctactttacaaaa
gatgctacgattgagtctttaggatctgttctttttacaggaaataacgttacagctaca
caagctagttctgcaacatctggacaaaatacaaatactgccaactatggggcagccatc
tttggagatccaggaaccactcaatcgtctcaaacagatgccattttaacccttcttgct
tcttctggaaacattacttttagcaacaacagtttacagaataaccaaggtgatactccc
gctagcaagttttgtagtattgcaggatacgtcaaactctctctacaagccgctaaaggg
aagactattagctttttcgattgtgtgcacacctctaccaaaaaaataggttcaacacaa
aacgtttatgaaactttagatattaataaagaagagaacagtaatccatatacaggaact
attgtgttctcttctgaattacatgaaaacaaatcttacatcccacagaatgcaatcctt
cacaacggaactttagttcttaaagagaaaacagaactccacgtagtctcttttgagcag
aaagaagggtctaaattaattatgaaacccggagctgtgttatctaaccaaaacatagct
aacggagctctagttatcaatgggttaacgattgatctttccagtatggggactcctcaa
gcaggggaaatcttctctcctccagaattacgtatcgttgccacgacctctagtgcatcc
ggaggaagcggggtcagcagtagtataccaacaaatcctaaaaggatttctgcagcagcg
ccttcaggttctgccgcaactactccaactatgagcgagaacaaagttttcctaacagga
gaccttactttaatagatcctaatggaaacttttaccaaaaccctatgttaggaagcgat
ctagatgtaccactaattaagcttccgactaacacaagtgacgtccaagtctatgattta
actttatctggggatcttttccctcagaaagggtacatgggaacctggacattagattct
aatccacaaacagggaaacttcaagccagatggacattcgatacctatcgtcgctgggta
tacatacctagggataatcatttttatgcgaactctatcttaggctcccaaaactcaatg
attgttgtgaagcaagggcttatcaacaacatgttgaataatgcccgcttcgatgatatc
gcttacaataacttctgggtttcaggagtaggaactttcttagctcaacaaggaactcct
ctttccgaagaattcagttactacagccgcggaacttcagttgccatcgatgccaaacct
agacaagattttatcctaggagctgcatttagtaagatggtggggaaaaccaaagccatc
aaaaaaatgcataattacttccataagggctctgagtactcttaccaagcttctgtctat
ggaggtaaattcctgtatttcttgctcaataagcaacatggttgggcacttcctttccta
atacaaggagtcgtgtcctatggacatattaaacatgatacaacaacactttacccttct
atccatgaaagaaataaaggagattgggaagatttaggatggttagcggatcttcgtatc
tctatggatcttaaagaaccttctaaagattcttctaaacggatcactgtctatggggaa
cttgagtattccagcattcgccagaaacagttcacagaaatcgattacgatccaagacac
ttcgatgattgtgcttacagaaatctgtcgcttcctgtgggatgcgctgtcgaaggagct
atcatgaactgtaatattcttatgtataataagcttgcattagcctacatgccttctatc
tacagaaataatcctgtctgtaaatatcgggtattgtcttcgaatgaagctggtcaagtt
atctgcggagtgccaactagaacctctgctagagcagaatacagtactcaactatatctt
ggtcccttctggactctctacggaaactatactatcgatgtaggcatgtatacgctatcg
caaatgactagctgcggtgctcgcatgatcttctaa
DBGET
integrated database retrieval system
