Chlamydia trachomatis F/SotonF3: SOTONF3_00472
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Entry
SOTONF3_00472 CDS
T02552
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ctrf
Chlamydia trachomatis F/SotonF3
Pathway
ctrf03410
Base excision repair
ctrf03430
Mismatch repair
ctrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOTONF3_00472
03430 Mismatch repair
SOTONF3_00472
03440 Homologous recombination
SOTONF3_00472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctrf03400
]
SOTONF3_00472
DNA repair and recombination proteins [BR:
ctrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SOTONF3_00472
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SOTONF3_00472
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SOTONF3_00472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CCP57128
LinkDB
All DBs
Position
complement(518182..519936)
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AA seq
584 aa
AA seq
DB search
MEKDSLSSLGQKWDYPKHNEVFLKKISKEFHLHPAIAQVLISRGFQSIQEIRDFLHPQLS
SLHSTSLFLDMEKAVVRLLQAKANNEHVMIYGDGDVDGITGVTLIVEFLQILGVKTSYCC
SGTLFKQHGETASLISQMLQDGISLLITVDCGITAGKEVQAINKQGIDVIVTDHHMPTGK
LPHCIAMLNPKLDKNPYPNKELTGVGVAFKLVCATYEELIQQDASWKDKIDLLRFLDLVS
LGTIADVGRLSGENRILVSYGIKEIAKGKRLGLKKLCSLSGVDKSEVSSTNLGIRITPKL
NSLGRLADSSQGVKLLLSQDPKNIGTIVSELSVVNQERQRIEAEVLRDVERILAANPKLT
AQSAIVLASPNWHSRVIPIISARLARTYNKPVAIIALQDGIGKGSLRTIGSFPLLGVLRK
CESFFLSYGGHDFAAGLMIKEDQVEGFRKKFIHLVSSSLRKDDAMRTLSLDVGMDFSRIN
RDLIASMELLEPFGKGNVSPVFYTKAIQVRYPKLLAGNHVKLYLNSGERNLEGTAFGQGD
KISLLKANWNIPLDIAYTLRIMRRSARGAIRLLIQDFRIQIPRL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagatagtttatcctcccttggacaaaaatgggattaccctaagcataatgag
gtctttctaaagaagatctcaaaagagtttcatcttcatcccgcgattgctcaagtgctc
atatctcggggatttcagtctatccaagagattcgagattttctgcatccccagctctcc
tcattgcactccacctctttgttcttagatatggagaaagctgtagtacggttactccaa
gctaaagcaaataatgagcacgtgatgatctatggagatggggatgtagacggtataaca
ggcgtgaccttgatcgttgaatttctacaaatacttggagtgaaaacaagttattgctgt
tccgggacattgtttaaacaacatggagagacagcttctttaatttctcaaatgctgcag
gatggtatttctcttttaattactgtggattgcggtatcacagcagggaaagaggttcag
gctatcaataaacagggtatagacgtgatcgttacggatcaccatatgcctacagggaag
cttccgcattgcattgcaatgctaaatcctaaattagataaaaatccttatccaaataaa
gagcttacaggagtaggagtcgcgtttaaattggtatgcgcaacctatgaagaattgatc
cagcaggatgcttcttggaaagacaaaatagaccttttgcgttttttagatttggtaagt
ttggggacgattgcagatgtagggaggctttcaggagagaatcgtatcttagtttcttat
ggaattaaagaaatagcaaaaggaaaacgattaggcttaaaaaagctgtgttcattatca
ggggttgataagtctgaggtatcgtcgaccaatctaggaattagaattactccaaaactc
aatagtttagggaggttggcagattcaagtcagggtgtaaagttacttttgtctcaagat
cctaaaaatattggaacgatcgtctcagagctttctgttgtaaatcaagagcgtcagcga
atagaagccgaggtactgcgcgatgtggaaaggattctagctgcgaatcctaagcttaca
gctcaatcagctattgtattagcttctcctaattggcactctagagtaatccccattatt
tctgctcgtttagcgcgtacctataacaagccagtagcaattattgctctccaagatggg
ataggaaagggatctttacgtactataggatctttccctttattaggagttcttcgtaaa
tgcgaatccttttttctatcgtatggcgggcatgatttcgctgccgggcttatgatcaaa
gaagatcaggtcgagggattcaggaaaaaatttattcatctagtgagttcttctttgaga
aaagatgatgcaatgcgtacgctttccttagatgttgggatggatttctctcgcatcaat
cgggatttaattgcttctatggagcttcttgagccttttggaaaagggaatgtatcccca
gtcttctatacaaaagccatacaggtacgttatccaaagttattagccgggaaccatgtc
aaattgtatttgaatagtggggagagaaacttggaggggacggctttcggtcagggggat
aagattagtctactcaaagcgaattggaatatacctttggatatcgcctatacgttacgt
attatgaggcggtcggctcgcggagcaattcgtttgttgattcaggattttcgtatacag
attcctcggttgtaa
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