Chlamydia trachomatis F/SotonF3: SOTONF3_00643
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Entry
SOTONF3_00643 CDS
T02552
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctrf
Chlamydia trachomatis F/SotonF3
Pathway
ctrf03420
Nucleotide excision repair
ctrf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SOTONF3_00643
03430 Mismatch repair
SOTONF3_00643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctrf03400
]
SOTONF3_00643
Enzymes [BR:
ctrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SOTONF3_00643
DNA repair and recombination proteins [BR:
ctrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOTONF3_00643
MMR (mismatch excision repair)
Other MMR factors
SOTONF3_00643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
CCP57292
LinkDB
All DBs
Position
687859..689826
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AA seq
655 aa
AA seq
DB search
MHRVYAFSKIFFEPENIYYIHMLTSELNAAQVTAVTAPLQPVLVLAGAGAGKTRVVTHRI
LHLIEESRLDPKQILAITFTNKAANELKERVQSQCRELGYSDVPMVSTFHSLSVYILRRS
IHLLDRQSNFVIYDQSDSEKSIKQCLRKLNLDKKLCNAMQFTISQAKNRLQSPEDLDSKE
YPDPTRTVYAEYQEQLRAANALDFDDLLFLTEKLLRIPEVQQEYANHWKALLIDEYQDTN
HAQYLITKRLAAAHNNIFVVGDPDQSIYSWRGANISNILNFEQDYSQALVVRLEENYRSC
GTILEAANALIQNNSARLEKTLRSVKGPGDKIFCFTGKNDRDEAEQVLEEISNLHSYKDI
PLSDICILYRTNFQSQSFEAALLKRGYPYEIIGGISFYKRREIQDILAFLRLFSNNYDMA
AFERTISLKKCGIGATTLAALMNYAKTTDLPILQACWDVLEKKSIRLTKKQQQGLFSYLT
HFHQMEQLYGNCDLHEFINETIRITDYLSILKEDPETYEDRKNNLEQLLAETQIWGKSSE
NLPGFLEDLALKSSADETASSHDRLKLMTIHNSKGLEFPVVFLVGLEENLLPHANSKGMH
ENIEEERRLCYVGITRAQEYLYLSRAKTRFLWGTERTMVPSRFISELPKALLKFV
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcatagagtatatgcattctcgaaaattttcttcgaacccgaaaatatatattacata
catatgcttacatccgaattaaatgcagcacaagttaccgccgtcacggcgccactacaa
ccagtcctggtcttagctggagctggagcagggaaaactcgagtagtcactcatcgaatc
cttcatttaatagaagaatcccggctcgatcctaaacaaattttagctattacgttcacg
aacaaagcagctaacgaactaaaagaacgtgtccaatcgcaatgtcgtgagctaggatat
tcagacgtacctatggtaagcacattccatagtcttagcgtttatatcctacgacgctct
attcatttgttagatagacagtcgaattttgttatttatgatcagagtgattctgaaaaa
tcaattaagcaatgcttacgcaagctgaacctcgataaaaagctttgcaatgcaatgcaa
tttactatctctcaagcaaaaaatcgcttgcagagtcctgaagatctcgattccaaagaa
tatccagaccctactcgcaccgtttatgctgaataccaagaacagttacgtgctgcgaac
gctctagatttcgatgatctgttattcctaacagaaaaactgctgcgcatacctgaagtc
cagcaagaatacgctaatcattggaaagccttgttgatagatgagtatcaagacaccaac
cacgcgcaatatctcattaccaaacgtcttgctgcagctcataacaatatctttgtcgtt
ggagatcccgaccaatctatatattcttggagaggcgccaacatctctaatatcttaaac
tttgagcaagattattcgcaggctttagttgttcgcttagaagaaaactatcgttcttgt
gggaccatcctagaagccgctaatgctttgattcaaaataattctgcacgcttagaaaaa
acattgcgtagtgtaaaagggcctggagataaaattttctgttttacagggaaaaatgac
cgcgatgaggcagagcaagtcttagaagaaatctctaatcttcattcctataaagatatc
cctctctctgacatttgcattttatatcgaacgaactttcagtctcaatcgttcgaagcg
gctcttcttaagcgaggttatccctatgaaattataggtggcatttccttctacaagcgt
agagaaatccaagatattcttgctttccttcgcttattttctaataactacgacatggca
gcctttgagcgaaccattagcctgaaaaaatgcggtattggagctaccacattagccgct
cttatgaactatgccaaaacaacagacctacctatattgcaggcttgttgggacgtatta
gagaaaaaatctatccgtttaactaaaaaacaacagcaagggcttttctcttatttgact
catttccatcaaatggagcagctatacggaaactgcgatcttcatgaattcatcaatgaa
acgatccgcatcacggattacctctccatcctcaaagaagatcctgaaacctatgaagat
agaaaaaacaacttagagcaattattagcagaaacgcaaatatggggtaaaagcagtgaa
aacttgcctggtttcctagaagatctagctctaaaaagttccgcagatgaaacagcaagt
tcccatgatcgcctcaagctcatgacgatccataacagtaaagggttagagtttcctgta
gtctttctggtaggtcttgaagaaaaccttcttcctcatgccaactcgaaaggtatgcat
gaaaatattgaagaggaacggagattgtgttacgtgggaattacccgagcacaagagtat
ctctatttatctcgagcaaaaacccgattcctttggggaacggaacgcaccatggtcccc
agcagatttattagcgagcttccgaaggctcttttaaaatttgtttaa
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