Chlamydia trachomatis Ia/SotonIa1: SOTONIA1_00434
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Entry
SOTONIA1_00434 CDS
T02565
Name
(GenBank) chlamydial polymorphic outer membrane protein repeat
Organism
ctrh
Chlamydia trachomatis Ia/SotonIa1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ChlamPMP_M
Chlam_PMP
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
CCP58876
LinkDB
All DBs
Position
475378..480573
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AA seq
1731 aa
AA seq
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MKWLSATAVFAAVLPSVSGFCFPEPKELNFSRVGTSSSTTFTETVGEAGAEYIVSGNASF
TKFTNIPTTDTTTPTNSNSSSSNGETASVSEDSDSTTTTPDPKGGGAFYNAHSGVLSFMT
RSGTEGSLTLSEIKMTGEGGAIFSQGELLFTDLTGLTIQNNLSQLSGGAIFGGSTISLSG
ITKATFSSNSAEVPAPVKKPTEPKAQTASETSGSSSSSGNDSVSSPSSSRAEPAAANLQS
HFICATATPAAQTDTETSTPSHKPGSGGAIYAKGDLTIADSQEVLFSINKATKDGGAIFA
EKDVSFENITSLKVQTNGTEEKGGAIYAKGDLSIQSSKQSLFNSNYSKQGGGALYVEGDI
NFQDLEEIRIKYNKAGTFETKKITLPKAQASAGNADAWASSSPQSGSGATTVSNSGDSSS
GSDSDTSETVPATAKGGGLYTDKNLSITNITGIIEIANNKATDVGGGAYVKGTLTCENSH
RLQFLKNSSDKQGGGIYGEDNITLSNLTGKTLFQENTAKEEGGGLFIKGTDKALTMTGLD
SFCLINNTSEKHGGGAFVTKEISQTYTSDVETIPGITPVHGETVITGNKSTGGNGGGVCT
KRLALSNLQSISISGNSAAENGGGAHTCPDSFPTADTAEQPAAASAATSTPKSAPVVSTA
LSTPSSSTVSSLTLLAASSQASPATSNKETQDPNADTDLLIDYVVDTTISKNTAKKGGGI
YAKKAKMSRIDQLNISENSATEIGGGICCKESLELDTLVSLSVTENLVGKEGGGLHAKTV
NISNLKSGFSFSNNKANSSSTGVATTASATPTYSGVVGGAIYGEKVTFSQCSGTCQFSGN
QAIDNNPSQSSLNVQGGAIYAKTSLSIGSSDAGTSYIFSGNSVSTGKSQTTGQIAGGAIY
SPTVTLNCPATFSNNTASMATPKTSSEDGSSGNSIKDTIGGAIAGTAITLSGVSRFSGNT
ADLGAAIGTLANANTPSATSGSQNSITEKITLENGSFIFERNQANKRGAIYSPSVSIKGN
NITFNQNTSTHDGSAIYFTKDATIESLGSVLFTGNNVTATQASSATSGQNTNTANYGAAI
FGDPGTTQSSQTDAILTLLASSGNITFSNNSLQNNQGDTPASKFCSIAGYVKLSLQAAKG
KTISFFDCVHTSTKKTGSTQKVYETLDINKEEKSNPYTGTIVFSSELHENKSYIPQNAIL
HNGTLVLKEKTELHVVSFEQKEGSKLIMEPGAVLSNQNIANGALAINGLTIDLSSMGTPQ
AGEIFSPPELRIVATTSSASGGSGVSSSIPTNPKRISAAAPSGSAATTPTMSENKVFLTG
DLTLIDPNRNFYQNPILGSDLDVPLIKLPTDTSDVQVYDLTLSGDLFPQKGYMGTWTLDS
NPQTGKLQARWTFDTYRRWVYIPRDNHFYANSILGSQNSMIVVKQGLINNMLNNARFDDI
AYNNFWVSGVGTFLAQQGTPLSEEFSYYSRGTSVAIDAKPRQDFILGAAFSKMVGKTKAI
KKMHNYFHKGSEYSYQASVYGGKFLYFLLNKQHGWALPFLIQGVVSYGHIKHDTTTLYPS
IHERNKGDWEDLGWLADLRISMDLKEPSKDSSKRITVYGELEYSSIRQKQFTEIDYDPRH
FDDCAYRNLSLPVGCAVEGAIMNCNILMYNKLALAYMPSIYRNNPVCKYRVLSSNEAGQV
ICGVPTRTSARAEYSTQLYLGPFWTLYGNYTIDVGMYTLSQMTSCGARMIF
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggctgtcagctactgcggtgtttgctgctgttctcccctcagtttcagggttt
tgcttcccagaacctaaagaattaaatttctctcgcgtaggaacttcttcctctaccact
tttactgaaacagttggagaagctggggcagaatatatcgtctctggtaacgcatctttc
acaaaatttaccaacattcctactaccgatacaacaactcccacgaactcaaactcctct
agctctaacggagagactgcttccgtttctgaggatagtgactctacaacaacgactcct
gatcctaaaggtggcggcgccttttataacgcgcactccggagttttgtcctttatgaca
cgatcaggaacagaaggttccttaactctgtctgagataaaaatgactggtgaaggcggt
gctatcttctctcaaggagagctgctatttacagatctgacaggtctaaccatccaaaat
aacttatcccagctatccggaggagcgatttttggaggatctacaatctccctatcaggg
attactaaagcgactttctcctccaactctgcagaagttcctgctcctgttaagaaacct
acagaacctaaagctcaaacagcaagcgaaacgtcgggttctagtagttctagcggaaat
gattcggtgtcttcccccagttccagtagagctgaacccgcagcagctaatcttcaaagt
cactttatttgtgctacagctactcctgctgctcaaaccgatacagaaacatcaactccc
tctcataagccaggatctgggggagctatctatgctaaaggcgaccttactatcgcagac
tctcaagaggtactattctcaataaataaagctactaaagatggaggagcgatctttgct
gagaaagatgtttctttcgagaatattacatcattaaaagtacaaactaacggtactgaa
gaaaagggaggagctatctatgctaaaggtgacctctcaattcaatcttctaaacagagt
ctttttaattctaactacagtaaacaaggtggtggggctctatatgttgaaggagatata
aacttccaagatcttgaagaaattcgcattaagtacaataaagctggaacgttcgaaaca
aaaaaaatcactttaccaaaagctcaagcatctgcaggaaatgcagatgcttgggcctct
tcctctcctcaatctggttctggagcaactacagtctccaactcaggagactctagctct
ggctcagactcggatacctcagaaacagttccagccacagctaaaggcggtgggctttat
actgataagaatctttcgattactaacatcacaggaattatcgaaattgcaaataacaaa
gcgacagatgttggaggtggtgcttacgtaaaaggaacccttacttgtgaaaactctcac
cgtctacaatttttgaaaaactcttccgataaacaaggtggaggaatctacggagaagac
aacatcaccctttctaatttgacagggaagactctattccaagagaatactgccaaagaa
gagggcggtggactcttcataaaaggtacagataaagctcttacaatgacaggactggat
agtttctgtttaattaataacacatcagaaaaacatggtggtggagcctttgttaccaaa
gaaatctctcagacttacacctctgatgtggaaacaattccaggaatcacgcctgtacat
ggtgaaacagtcattactggcaataaatctacaggaggtaatggtggaggcgtgtgtaca
aaacgtcttgccttatctaaccttcaaagcatttctatatccgggaattctgcagcagaa
aatggtggtggagcccacacatgcccagatagcttcccaacggcggatactgcagaacag
cccgcagcagcttctgccgcgacgtctactcccaagtctgccccagtggtctcaactgct
ctaagcacaccttcatcttctaccgtctcttcattaaccttactagcagcctcttcacaa
gcctctcctgcaacctctaataaggaaactcaagatcctaatgctgatacagacttattg
atcgattatgtagttgatacgactatcagcaaaaacactgctaagaaaggcggtggaatc
tatgctaaaaaagccaagatgtcccgcatagaccaactgaatatctctgagaactccgct
acagagataggtggaggtatctgctgtaaagaatctttagaactagataccctagtctcc
ttatctgtaacagagaaccttgttgggaaagaaggtggaggcttacatgctaaaactgta
aatatttctaatctgaaatcaggcttctctttctcgaacaacaaagcaaactcctcatcc
acaggagtcgcaacaacagcttcagcaacaccaacttattcaggtgtagtaggaggagct
atctatggagaaaaggttacattctctcaatgtagcgggacttgtcagttctctgggaac
caagctatcgataacaatccctcccaatcatcgttgaacgtacaaggaggagccatctat
gccaaaacctctttgtctattggatcttccgatgctggaacctcctatattttctcgggg
aacagtgtctccactgggaaatctcaaacaacagggcaaatagcgggaggagcgatctac
tcccctactgttacattgaattgtcctgcgacattctctaacaatacagcctctatggct
acaccaaagacttcttctgaagatggatcctcaggaaattctattaaagataccattgga
ggagccattgcagggacagccattaccctatctggagtctctcgattttcagggaatacg
gctgatttaggagctgcaataggaactctagctaatgcaaatacacccagtgcaactagc
ggatctcaaaatagcattacagaaaaaattactttagaaaacggttcttttatttttgaa
agaaaccaagctaataaacgtggagcgatttactctcctagcgtttccattaaagggaat
aatattaccttcaatcaaaatacatccactcatgatggaagcgctatctactttacaaaa
gatgctacgattgagtctttaggatctgttctttttacaggaaataacgttacagctaca
caagctagttctgcaacatctggacaaaatacaaatactgccaactatggggcagccatc
tttggagatccaggaaccactcaatcgtctcaaacagatgccattttaacccttcttgct
tcttctggaaacattacttttagcaacaacagtttacagaataaccaaggtgatactccc
gctagcaagttttgtagtattgcaggatacgtcaaactctctctacaagccgctaaaggg
aagactattagctttttcgattgtgtgcacacctctaccaaaaaaacaggttcaacacaa
aaagtttatgaaactttagatattaataaagaagagaagagtaatccatatacaggaact
attgtgttctcttctgaattacatgaaaacaaatcttacatcccacagaatgcaatcctt
cacaacggaactttagttcttaaagagaaaacagaactccacgtagtctcttttgagcag
aaagaagggtctaaattaattatggaacccggagctgtgttatctaaccaaaacatagct
aacggagctctagctatcaatgggttaacgattgatctttccagtatggggactcctcaa
gcaggggaaatcttctctcctccagaattacgtatcgttgccacgacctctagtgcatcc
ggaggaagcggggtcagcagtagtataccaacaaatcctaaaaggatttctgcagcagcg
ccttcaggttctgccgcaactactccaactatgagcgagaacaaagttttcctaacagga
gaccttactttaatagatcctaatagaaacttttaccaaaaccctatattaggaagcgat
ctagatgtaccactaattaagcttccgactgacacaagtgacgtccaagtctatgattta
actttatctggggatcttttccctcagaaagggtacatgggaacctggacattagattct
aatccacaaacagggaaacttcaagccagatggacattcgatacctatcgtcgctgggta
tacatacctagggataatcatttttatgcgaactctatcttaggctcccaaaactcaatg
attgttgtgaagcaagggcttatcaacaacatgttgaataatgcccgcttcgatgatatc
gcttacaataacttctgggtttcaggagtaggaactttcttagctcaacaaggaactcct
ctttccgaagaattcagttactacagccgcggaacttcagttgccatcgatgccaaacct
agacaagattttatcctaggagctgcatttagtaagatggtggggaaaaccaaagccatc
aaaaaaatgcataattacttccataagggctctgagtactcttaccaagcttctgtctat
ggaggtaaattcctgtatttcttgctcaataagcaacatggttgggcacttcctttccta
atacaaggagtcgtgtcctatggacatattaaacatgatacaacaacactttacccttct
atccatgaaagaaataaaggagattgggaagatttaggatggttagcggatcttcgtatc
tctatggatcttaaagaaccttctaaagattcttctaaacggatcactgtctatggggaa
ctcgagtattccagcattcgccagaaacagttcacagaaatcgattacgatccaagacac
ttcgatgattgtgcttacagaaatctgtcgcttcctgtgggatgcgctgtcgaaggagct
atcatgaactgtaatattcttatgtataataagcttgcattagcctacatgccttctatc
tacagaaataatcctgtctgtaaatatcgggtattgtcttcgaatgaagctggtcaagtt
atctgcggagtgccaactagaacctctgctagagcagaatacagtactcaactatatctt
ggtcccttctggactctctacggaaactatactatcgatgtaggcatgtatacgctatcg
caaatgactagctgcggtgctcgcatgatcttctaa
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