Chlamydia trachomatis Ia/SotonIa1: SOTONIA1_00680
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Entry
SOTONIA1_00680 CDS
T02565
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ctrh
Chlamydia trachomatis Ia/SotonIa1
Pathway
ctrh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SOTONIA1_00680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctrh03400
]
SOTONIA1_00680
Enzymes [BR:
ctrh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SOTONIA1_00680
DNA repair and recombination proteins [BR:
ctrh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SOTONIA1_00680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_12
UvrD_C_2
Viral_helicase1
AAA_30
PDDEXK_1
AAA_11
ResIII
DUF7660
Motif
Other DBs
NCBI-ProteinID:
CCP59111
LinkDB
All DBs
Position
complement(728514..731594)
Genome browser
AA seq
1026 aa
AA seq
DB search
MSSFDIFSPTASVSGKFFLEASAGTGKTFTIEQVVLRSLLEGSIEQTKNILVVTFTNAAT
NELKLRIQASLKQALSLFSQALSHPGTPLPPYISSSETKVKQLYMKIRNSLATLDEMNIF
TIHGFCRFTLEQHFPWIQPIQPSSIFSEPQTIQQHILDYLRKNLWDTVLSPKQYAFLSYH
HRATTQQTRHLIERLLQDYTSTPNLALSPLSITLQKLKAWVSRYQHLAPLSLEEMQAFSL
RFKQSDLSIERELPAFVQQFETNPYSLDMLFFPGMVQKFQEENRNKKKLSAPASPLDPFF
QDWIQLAHPFCQKEPIFHTLLKSVQQHLKTHCAQSYSHDESIATLESLLAHNDTVVSQLR
KQFQLVLIDEFQDTDKRQWQIFSKLFASPDYSGSLFLIGDPKQSIYEWRNADLPTYLQAK
HSFPKEAQLILDTNYRSTPELMQALNHLFSLPTPFLETPQNILYHPLHSKGSAEISYSEF
SPIHFFSSEDIQEETLWISKTASYLRSAYSIPFGNMAVLVQDYPQALKLITHSTIPMAYC
KEKRIFDRTESPYLLILLLEALLYPENQQKIQAILMSRLFQLSSTEIHQHLKTFSSLFFT
LNRHLYHYSLLATFYKLMGENVLSQTIGETLLQTPLGDIIFQELEALCLYLDKTTENPHH
KLLHLINILITGKYDEELSFSSQSNDENMIKITTVHSSKGLEYDVVFCSCLNKAKEKTPS
VHMREMYVVCTRAKKFLFIPFSPIEKRSLSTKKLSALANYANVTKHHSVPHLVETLTSSS
PELFSSSFQPPESSLTPDRERLPQQTYFSLPHLPSRTIHSFSSTVENLHFSEPIQELSPS
LLFPGGSLTGTLIHKLLESLAGNFAACFEEIFNKAQTLLKNTPLEGYESIIAEKICTVFS
TTLPFSSGSFALRNVHPHNIRAEETFLLQEEGELWQGIVDLFFEHKDRFFIIDWKTSFLG
DETSCYSPDQLHLYIQRQGLDRQERLYRKAAKRFLHQFNSLLQVEMAFVFIRGLDDKGNG
FLQPGR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttttgatattttttcaccaacagcttctgtttctgggaaatttttcttagaa
gcttctgcaggaactgggaaaacattcactatagaacaagtggttcttcgctcgttatta
gaaggatcgatcgaacagacaaagaacattctggtagttacattcaccaacgcagctacc
aatgaattaaaactgcgtattcaagcaagcctcaaacaagcattgagtcttttctcccaa
gcactctctcatcccgggactcccttacctccatatatctcttcctcagaaacaaaagta
aaacagctttacatgaagatccgtaatagcctggccactttagatgaaatgaacatcttt
actattcatggattttgtcgttttacactggagcaacacttcccttggatacagcctatt
cagccgtcttctattttctcagagcctcaaaccatacaacagcatatcctagactactta
cgtaaaaatctttgggacacggttctctctcccaaacaatacgccttcttatcttatcat
caccgcgctactacccaacaaacacgccacctaatagagagactacttcaagattacact
tccacaccaaatttagcgctctcgcctctatcgataaccctgcaaaaactaaaagcttgg
gtctcccgctaccaacacttagctcctctctctctcgaggaaatgcaagctttctctctt
cgttttaaacaaagcgatctctctatcgagcgggaactccccgcttttgtgcaacaattc
gaaaccaatccttattctttggatatgctgtttttcccaggaatggtacagaagtttcag
gaggaaaaccgcaataagaaaaaattaagtgctccagcttctcctttagatccttttttc
caagattggatacagttagctcatcctttttgccaaaaagaacctattttccatacgcta
cttaaaagcgtgcaacaacatctgaaaactcactgcgcacaatcctattcccatgatgaa
agcatagccactttagaatctcttctagctcacaacgatactgtcgtctcacaactacgt
aaacaatttcagctagtcttgatcgatgaattccaagacactgacaaacgtcagtggcag
atcttttctaaactctttgcttctccagactattcaggatccctttttcttatcggagac
cctaaacagtctatttatgaatggagaaatgcagacctccccacatacttgcaagcaaaa
cactccttcccaaaagaagctcagcttattttagatacaaattaccgatccaccccagag
cttatgcaagctctcaaccatttgttttctcttcccacaccgtttctagagactccacaa
aacattctgtatcaccctttacattctaaagggagcgcggagatctcctactcagagttc
agtcctattcatttcttctcctcagaagacattcaagaagaaacgttatggatttctaaa
accgcttcttatcttcgatcagcgtattccattccatttggaaatatggctgttctagta
caagactatccacaggctctgaagctaatcactcacagcaccatccccatggcctactgc
aaagaaaaacgtatttttgatcgcacagaatccccctaccttctgattctactattggaa
gcccttctgtacccagagaatcaacaaaagattcaagccattttgatgagccggctattt
cagctttcctctacggagattcaccagcatcttaaaacgttttcttctttgtttttcact
ctgaatcgacatctctaccactattctctattagctaccttctataagctgatgggagaa
aacgttttatctcaaaccataggagaaacattattgcaaacccctcttggagatatcatt
ttccaagaattagaagcgctatgcttgtatcttgataaaactacagagaatccccatcac
aaactcttacatctcatcaatattctgattacagggaagtatgatgaagagctttctttc
tcgtcgcaatctaatgacgagaatatgataaaaattacgaccgttcactcttcaaaaggg
ctcgaatacgatgtagtattttgctcttgccttaacaaagcaaaagagaaaactccttct
gttcatatgcgagaaatgtatgtcgtatgcacaagagctaaaaaattcttatttattccg
ttttctcctatagagaaacgctcactaagcacaaaaaaactttctgctcttgctaactat
gctaatgttacaaaacatcatagcgttcctcatttagtagaaaccttgacttcctcatct
ccggaactattttcatccagcttccaacctcctgaaagctctctaactccggatagagaa
cgtcttcctcaacaaacatacttttctcttccacatctcccttctcgaactattcactct
ttctcttctacggtagagaatcttcacttttcggaacctattcaagaactgtcaccctct
cttttatttcctggaggctctctaacaggaacgttgattcataaacttttagaatcatta
gcagggaattttgctgcttgttttgaagaaattttcaataaagctcagacattattgaaa
aacactcctttagaaggatacgagtctattattgcagaaaaaatctgtacggtcttttca
acgactcttcctttttcttccggatcctttgctctcaggaatgtacatcctcataacata
cgtgcagaggaaactttcttactacaagaagaaggagagctatggcaaggaatcgtcgac
ttgttttttgaacataaggatcgattttttatcatcgactggaaaacttctttcttagga
gatgaaacctcttgctattccccagatcaactccatctctatattcaacgtcaagggtta
gatagacaggagagattgtacagaaaagcagcgaaaaggttcctacaccaatttaattca
ttattgcaagtagaaatggccttcgtatttatccgaggcttggatgacaagggcaatgga
tttttgcaaccaggacgttaa
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