Chlamydia trachomatis IU824: BN197_4171
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Entry
BN197_4171 CDS
T02493
Symbol
pmpB
Name
(GenBank) polymorphic outer membrane protein
Organism
ctri
Chlamydia trachomatis IU824
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ChlamPMP_M
Chlam_PMP
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
CCP28206
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All DBs
Position
475488..480746
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AA seq
1752 aa
AA seq
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MKWLSATAVFAAVLPSVSGFCFPEPKELNFSRVETSSSTTFTETIGEAGAEYIVSGNASF
TKFTNIPTTDTTTPTNSNSSSSSGETASVSEDSDSTTTTPDPKGGGAFYNAHSGVLSFMT
RSGTEGSLTLSEIKMTGEGGAIFSQGELLFTDLTSLTIQNNLSQLSGGAIFGGSTISLSG
ITKATFSCNSAEVPAPVKKPTEPKAQTASETSGSSSSSGNDSVSSPSSSRAEPAAANLQS
HFICATATPAAQTDTETSTPSHKPGSGGAIYAKGDLTIADSQEVLFSINKATKDGGAIFA
EKDVSFENITSLKVQTNGAEEKGGAIYAKGDLSIQSSKQSLFNSNYSKQGGGALYVEGGI
NFQDLEEIRIKYNKAGTFETKKITLPSLKAQASAGNADAWASSSPQSGSGATTVSDSGDS
SSGSDSDTSETVPVTAKGGGLYTDKNLSITNITGIIEIANNKATDVGGGAYVKGTLTCEN
SHRLQFLKNSSDKQGGGIYGEDNITLSNLTGKTLFQENTAKEEGGGLFIKGTDKALTMTG
LDSFCLINNTSEKHGGGAFVTKEISQTYTSDVETIPGITPVHGETVITGNKSTGGNGGGV
CTKRLALSNLQSISISGNSAAENGGGAHTCPDSFPTADTAEQPAAASAATSTPKSAPVST
ALSTPSSSTVSSLTLLAASSQASPATSNKETQDPNADTDLLIDYVVDTTISKNTAKKGGG
IYAKKAKMSRIDQLNISENSATEIGGGICCKESLELDALVSLSVTENLVGKEGGGLHAKT
VNISNLKSGFSFSNNKANSSSTGVATTASAPAAAAASLQAAAAAAPSSPATPTYSGVVGG
AIYGEKVTFSQCSGTCQFSGNQAIDNNPSQSSLNVQGGAIYAKTSLSIGSSDAGTSYIFS
GNSVSTGKSQTTGQIAGGAIYSPTVTLNCPATFSNNTASIATPKTSSEDGSSGNSIKDTI
GGAIAGTAITLSGVSRFSGNTADLGAAIGTLANANTPSATSGSQNSITEKITLENGSFIF
ERNQANKRGAIYSPSVSIKGNNITFNQNTSTHDGSAIYFTKDATIESLGSVLFTGNNVTA
TQASSATSGQNTNTANYGAAIFGDPGTTQSSQTDAILTLLASSGNITFSNNSLQNNQGDT
PASKFCSIAGYVKLSLQAAKGKTISFFDCVHTSTKKTGSTQNVYETLDINKEENSNPYTG
TIVFSSELHENKSYIPQNAILHNGTLVLKEKTELHVVSFEQKEGSKLIMEPGAVLSNQNI
ANGALAINGLTIDLSSMGTPQAGEIFSPPELRIVATTSSASGGSGVSSSIPTNPKRISAA
VPSGSAATTPTMSENKVFLTGDLTLIDPNGNFYQNPMLGSDLDVPLIKLPTNTSDVQVYD
LTLSGDLFPQKGYMGTWTLDSNPQTGKLQARWTFDTYRRWVYIPRDNHFYANSILGSQNS
MIVVKQGLINNMLNNARFDDIAYNNFWVSGVGTFLAQQGTPLSEEFSYYSRGTSVAIDAK
PRQDFILGAAFSKIVGKTKAIKKMHNYFHKGSEYSYQASVYGGKFLYFLLNKQHGWALPF
LIQGVVSYGHIKHDTTTLYPSIHERNKGDWEDLGWLADLRISMDLKEPSKDSSKRITVYG
ELEYSSIRQKQFTEIDYDPRHFDDCAYRNLSLPVGCAVEGAIMNCNILMYNKLALAYMPS
IYRNNPVCKYRVLSSNEAGQVICGVPTRTSARAEYSTQLYLGPFWTLYGNYTIDVGMYTL
SQMTSCGARMIF
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggctgtcagctactgcggtgtttgctgctgttctcccctcagtttcagggttt
tgcttcccagaacctaaagaattaaatttctctcgcgtagaaacttcttcctctaccact
tttactgaaacaattggagaagctggggcagaatatatcgtctctggtaacgcatctttc
acaaaatttaccaacattcctactaccgatacaacaactcccacgaactcaaactcctct
agctctagcggagaaactgcttccgtttctgaggatagtgactctacaacaacgactcct
gatcctaaaggtggcggcgccttttataacgcgcactccggagttttgtcctttatgaca
cgatcaggaacagaaggttccttaactctgtctgagataaaaatgactggtgaaggcggt
gctatcttctctcaaggagagctgctatttacagatctgacaagtctaaccatccaaaat
aacttatcccagctatccggaggagcgatttttggaggatctacaatctccctatcaggg
attactaaagcgactttctcctgcaactctgcagaagttcctgctcctgttaagaaacct
acagaacctaaagctcaaacagcaagcgaaacgtcgggttctagtagttctagcggaaat
gattcggtgtcttcccccagttccagtagagctgaacccgcagcagctaatcttcaaagt
cactttatttgtgctacagctactcctgctgctcaaaccgatacagaaacatcaactccc
tctcataagccaggatctgggggagctatctatgctaaaggcgaccttactatcgcagac
tctcaagaggtactattctcaataaataaagctactaaagatggaggagcgatctttgct
gagaaagatgtttctttcgagaatattacatcattaaaagtacaaactaacggtgctgaa
gaaaagggaggagctatctatgctaaaggtgacctctcaattcaatcttctaaacagagt
ctttttaattctaactacagtaaacaaggtgggggggctctatatgttgaaggaggtata
aacttccaagatcttgaagaaattcgcattaagtacaataaagctggaacgttcgaaaca
aaaaaaatcactttaccttctttaaaagctcaagcatctgcaggaaatgcagatgcttgg
gcctcttcctctcctcaatctggttctggagcaactacagtctccgactcaggagactct
agctctggctcagactcggatacctcagaaacagttccagtcacagctaaaggcggtggg
ctttatactgataagaatctttcgattactaacatcacaggaattatcgaaattgcaaat
aacaaagcgacagatgttggaggtggtgcttacgtaaaaggaacccttacttgtgaaaac
tctcaccgtctacaatttttgaaaaactcttccgataaacaaggtggaggaatctacgga
gaagacaacatcaccctatctaatttgacagggaagactctattccaagagaatactgcc
aaagaagagggcggtggactcttcataaaaggtacagataaagctcttacaatgacagga
ctggatagtttctgtttaattaataacacatcagaaaaacatggtggtggagcctttgtt
accaaagaaatctctcagacttacacctctgatgtggaaacaattccaggaatcacgcct
gtacatggtgaaacagtcattactggcaataaatctacaggaggtaatggtggaggcgtg
tgtacaaaacgtcttgccttatctaaccttcaaagcatttctatatccgggaattctgca
gcagaaaatggtggtggagcccacacatgcccagatagcttcccaacggcggatactgca
gaacagcccgcagcagcttctgccgcgacgtctactcccaaatctgccccggtctcaact
gctctaagcacaccttcatcttctaccgtctcttcattaaccttactagcagcctcttca
caagcctctcctgcaacctctaataaggaaactcaagatcctaatgctgatacagactta
ttgatcgattatgtagttgatacgactatcagcaaaaacactgctaagaaaggcggtgga
atctatgctaaaaaagccaagatgtcccgcatagaccaactgaatatctctgagaactcc
gctacagagataggtggaggtatctgctgtaaagaatctttagaactagatgctctagtc
tccttatctgtaacagagaaccttgttgggaaagaaggtggaggcttacatgctaaaact
gtaaatatttctaatctgaaatcaggcttctctttctcgaacaacaaagcaaactcctca
tccacaggagtcgcaacaacagcttcagcacctgctgcagctgctgcttccctacaagca
gccgcagcagccgcaccatcatctccagcaacaccaacttattcaggtgtagtaggagga
gctatctatggagaaaaggttacattctctcaatgtagcgggacttgtcagttctctggg
aaccaagctatcgataacaatccctcccaatcatcgttgaacgtacaaggaggagccatc
tatgccaaaacctctttgtctattggatcttccgatgctggaacctcctatattttctcg
gggaacagtgtctccactgggaaatctcaaacaacagggcaaatagcgggaggagcgatc
tactcccctactgttacattgaattgtcctgcgacattctctaacaatacagcctctata
gctacaccgaagacttcttctgaagatggatcctcaggaaattctattaaagataccatt
ggaggagccattgcagggacagccattaccctatctggagtctctcgattttcagggaat
acggctgatttaggagctgcaataggaactctagctaatgcaaatacacccagtgcaact
agcggatctcaaaatagcattacagaaaaaattactttagaaaacggttcttttattttt
gaaagaaaccaagctaataaacgtggagcgatttactctcctagcgtttccattaaaggg
aataatattaccttcaatcaaaatacatccactcatgatggaagcgctatctactttaca
aaagatgctacgattgagtctttaggatctgttctttttacaggaaataacgttacagct
acacaagctagttctgcaacatctggacaaaatacaaatactgccaactatggggcagcc
atctttggagatccaggaaccactcaatcgtctcaaacagatgccattttaacccttctt
gcttcttctggaaacattacttttagcaacaacagtttacagaataaccaaggtgatact
cccgctagcaagttttgtagtattgcaggatacgtcaaactctctctacaagccgctaaa
gggaagactattagctttttcgattgtgtgcacacctctaccaaaaaaacaggttcaaca
caaaacgtttatgaaactttagatattaataaagaagagaacagtaatccatatacagga
actattgtgttctcttctgaattacatgaaaacaaatcttacatcccacagaatgcaatc
cttcacaacggaactttagttcttaaagagaaaacagaactccacgtagtctcttttgag
cagaaagaagggtctaaattaattatggaacccggagctgtgttatctaaccaaaacata
gctaacggagctctagctatcaatgggttaacgattgatctttccagtatggggactcct
caagcaggggaaatcttctctcctccagaattacgtatcgttgccacgacctctagtgca
tccggaggaagcggggtcagcagtagtataccaacaaatcctaaaaggatttctgcagca
gtgccttcaggttctgccgcaactactccaactatgagcgagaacaaagttttcctaaca
ggagaccttactttaatagatcctaatggaaacttttaccaaaaccctatgttaggaagc
gatctagatgtaccactaattaagcttccgactaacacaagtgacgtccaagtctatgat
ttaactttatctggggatcttttccctcagaaagggtacatgggaacctggacattagat
tctaatccacaaacagggaaacttcaagccagatggacattcgatacctatcgtcgctgg
gtatacatacctagggataatcatttttatgcgaactctatcttaggctcccaaaactca
atgattgttgtgaagcaagggcttatcaacaacatgttgaataatgcccgcttcgatgat
atcgcttacaataacttctgggtttcaggagtaggaactttcttagctcaacaaggaact
cctctttccgaagaattcagttactacagccgcggaacttcagttgccatcgatgccaaa
cctagacaagattttatcctaggagctgcatttagtaagatagtggggaaaaccaaagcc
atcaaaaaaatgcataattacttccataagggctctgagtactcttaccaagcttctgtc
tatggaggtaaattcctgtatttcttgctcaataagcaacatggttgggcacttcctttc
ctaatacaaggagtcgtgtcctatggacatattaaacatgatacaacaacactttaccct
tctatccatgaaagaaataaaggagattgggaagatttaggatggttagcggatcttcgt
atctctatggatcttaaagaaccttctaaagattcttctaaacggatcactgtctatggg
gaactcgagtattccagcattcgccagaaacagttcacagaaatcgattacgatccaaga
cacttcgatgattgtgcttacagaaatctgtcgcttcctgtgggatgcgctgtcgaagga
gctatcatgaactgtaatattcttatgtataataagcttgcattagcctacatgccttct
atctacagaaataatcctgtctgtaaatatcgggtattgtcttcgaatgaagctggtcaa
gttatctgcggagtgccaactagaacctctgctagagcagaatacagtactcaactatat
cttggtcccttctggactctctacggaaactatactatcgatgtaggcatgtatacgcta
tcgcaaatgactagctgcggtgctcgcatgatcttctaa
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integrated database retrieval system
