KEGG   Chlamydia trachomatis L2b/Ams1: L2BAMS1_00708
Entry
L2BAMS1_00708     CDS       T02558                                 
Name
(GenBank) putative outer membrane porin HofQ
  KO
K03219  type III secretion protein C
Organism
ctrm  Chlamydia trachomatis L2b/Ams1
Pathway
ctrm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ctrm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    L2BAMS1_00708
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ctrm02044]
    L2BAMS1_00708
Secretion system [BR:ctrm02044]
 Type III secretion system
  Type III secretion core apparatus
   L2BAMS1_00708
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 SrfA
Other DBs
NCBI-ProteinID: CCP70727
LinkDB
Position
767434..770199
AA seq 921 aa
MNIVTSNIGSKILRIIQNNKKLGLLSALVVLDAALLSVNSRSGEGLIGQSASLPNYHEAE
QQIAACPKNIAKNLAKKSSPGAKPTVGAPSPARPVSVKAAPAKPQAPVAQTPHFKKSHQI
FSPNFTQSSQQVNKLEERRRPLESRYLQGAAKQAAAAKEKKALEQEVSKQEEEASKLWEE
KQSYARRAVNAINFSVRKQIEEQQKTISNPGNDQTLPGKKDPHTSGEPVIQTVQDCSQDQ
EEEKKVLERLNKRSLTCQDLKEVGYTVNFEDISILELLQFVSKISGTNFVFDSNDLQFNV
TIVSHDPTSVDDLATILLQVLKMHDLKVVEQGNNVLIYRNPKLSKLSTVVTDGSAKDTCE
AVVVTRVFRLYSVSPSAAVGIIQPLLSHDAIISASESTRHIIVSDIAGNIEKVRELLQAL
DSPGTAIDMSEYDVQFANPAALVSYCQDVLGAMAEEEAFQIFIQPGTNKIFVISSPRLTA
KTIQLLESLDIPEMAHTLDDVTSPAAALGSSGAANPKSLRFFMYKLKYQNGAAIAQAIQD
IGYNLYVTTAMDEDFINTLNSIQWLPVNNSIVVIGNQANVDKVVSLLNGLDLPPKQVYIE
VLILETSLEKSWDFGVQWAALGDEQGKVAYASGLLSNTGLTDPLRNQSLPVAPNPGNISL
PTPGQLAGISDMMYGSSAFGLGIIGNVLSHNGKSYLTLGGLLSALDQDGDTTVVLNPRIM
AQDTQQASFFVGQTIPFQTTSTVIQETGSVTQNIEYEDIGVNLVVTSTIAPNNVVTLQIE
QTISELHSAQGVLTPVTDKTFAATRLQVPDGCFLVMSGHIRDKLTKIVSGVPLLSSLPLI
KGLFSRSIDQRQKRNIMIFIKPKVISSFEEGTALSNTEGYRYNWESERGSLEVAPRHAPE
CQHIPKVQAESNFKMLEIEAE
NT seq 2766 nt   +upstreamnt  +downstreamnt
gtgaacatagtgacgtcgaacataggaagcaagattttaagaatcattcaaaataacaag
aaattaggcctcttgtctgcgttagttgttctagatgcggcgttgttaagtgtgaattca
cgatctggcgaaggcttaataggccagtccgcttctttgccgaattatcatgaggcagaa
cagcagatcgctgcttgccctaaaaatattgctaagaatttagcaaagaaaagctctcca
ggggctaaacctacagtaggagctccctctcctgcacggccagtttctgtaaaggcagct
cctgcaaagccacaagctcctgtcgcacaaacaccgcattttaaaaagagccatcagatt
ttctctcctaattttacgcagtcttcccaacaggtgaataaacttgaggaaagaagacgt
cctttggagtctcgatacttacaaggcgcggctaagcaggcagctgctgcaaaggaaaaa
aaggctcttgaacaggaggtatccaaacaagaagaagaagcttctaaactctgggaagag
aaacagagttatgctcgtcgtgctgtgaatgccatcaatttcagtgtaagaaagcaaata
gaagagcaacagaaaaccatttccaatccaggaaatgaccagactcttcctgggaagaaa
gatccacatacatccggagaacctgttatccaaacggtacaagactgttctcaggatcaa
gaagaagagaaaaaagttctagagcgattaaacaaacgttctctgacgtgtcaggatctt
aaagaagtcggatatactgtcaattttgaggacatttctatcttagaactgctccagttt
gtgagcaagatctcaggaacgaatttcgtttttgatagcaatgacttgcaattcaatgtc
actatcgtttctcacgatcctacttccgtagatgatttagcaacgattctgttgcaagtc
ttgaaaatgcatgacttgaaagtcgttgaacaaggaaataacgtattgatctaccgcaat
ccgaagctttccaagctttccacggtagtcacagatggatcagcaaaagatacttgtgaa
gctgtagtagttacacgagtatttcgtttgtacagcgtcagtccttctgctgcggtaggc
attattcaaccgctgctctctcatgatgcaattattagtgcttccgagtctacgagacac
attatcgtatcagatatagcaggaaatattgagaaagtccgggagttattgcaagcattg
gatagcccaggcaccgctattgacatgtcggaatatgatgtgcagtttgcaaatcccgct
gctttggtcagctattgtcaggatgttctcggtgccatggctgaggaagaggcttttcaa
atttttattcagcctgggaccaataaaatttttgttatttcctcgccacgattaacagca
aagacaattcaattattggagtccttggacattccagaaatggcacatacgctagacgat
gtcacaagtcctgctgctgctttgggaagctctggagctgctaatcctaagagtttgcgc
ttcttcatgtacaaattaaaatatcaaaatggggcagctatcgctcaggcgattcaagat
attggatacaatctctacgtgacaacagcaatggatgaggatttcatcaacacattgaat
agtattcaatggttgcctgtaaacaactccatcgttgtcattggaaatcaagctaacgtc
gataaggtcgttagcttgctaaatgggttggacctccctccaaaacaagtgtacattgaa
gtattgattctagagacaagcttagagaagtcttgggacttcggagtacaatgggcagct
cttggagatgaacaagggaaggtggcatatgcttccggattgttgagtaatacaggatta
acggatcccctccgtaatcaatctctgcctgtagcacctaacccaggaaatatctcattg
ccaacacctggtcagttagcagggatcagtgatatgatgtacggatcctctgcattcgga
ctaggaattattggaaacgttctcagccataatggaaaatcgtatttaacattagggggg
ttattgagcgccctagatcaagatggcgataccacagtggtacttaaccctagaattatg
gcgcaagatacacaacaggcatcgttctttgtaggacagacgattccgttccagactacg
agtacggtgattcaggaaaccggatctgttacacaaaatattgaatacgaagatatcgga
gtcaatcttgttgtaacttcgacaatagctcctaataatgtagtcactttacagatagag
caaacgatttctgagttacattcggcgcaaggtgtgttgactcctgtaacagataaaaca
tttgcagctacgagactacaagttccggatggatgtttcctcgttatgagtgggcatatt
cgtgacaaactgacaaaaattgtatccggagtgccgttactcagttctcttcctctgatc
aaaggactctttagtcggtctatcgatcagcgtcagaaacgaaatattatgattttcatt
aagccgaaagtcatcagtagcttcgaggaaggaacagcgttatcaaacacagaaggatat
cgttataactgggaaagcgaaagaggatctttagaggtagcccctcgtcacgcccctgaa
tgccagcatattcctaaggtccaagcagaaagtaattttaaaatgctggaaatagaagcg
gaataa

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