Chlamydia trachomatis D/SotonD6: SOTOND6_00538
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Entry
SOTOND6_00538 CDS
T02561
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ctrt
Chlamydia trachomatis D/SotonD6
Pathway
ctrt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ctrt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SOTOND6_00538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctrt03021
]
SOTOND6_00538
03400 DNA repair and recombination proteins [BR:
ctrt03400
]
SOTOND6_00538
Enzymes [BR:
ctrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SOTOND6_00538
Transcription machinery [BR:
ctrt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SOTOND6_00538
DNA repair and recombination proteins [BR:
ctrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SOTOND6_00538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
AMIN-like
TerD
Motif
Other DBs
NCBI-ProteinID:
CCP54482
LinkDB
All DBs
Position
complement(585174..586307)
Genome browser
AA seq
377 aa
AA seq
DB search
MSDSSHNLLYNKFELPESVKMSPVEGAVGGIDKVARFVADPLEKGMGHTLGSALRRALLI
GLEAPAIVSFSMTGVLHEYMAVEGIIEDVTNIVLNLKGSLLKKYPLQDCEGGRCSQKLRA
TISIDASDLAAAGGQKEVTLGDLLQEGTFEAVNPEHVIFTVTRPMQLEVMLRVAFGRGYS
PSERIVLEERGMNEIVLDAAFSPVVLVNYFVEDTRVGQDTDFDRLVLQVETDGRVAPKEA
VAFATQILSKHFSVFEKMDEKRIVFEEAISVEKENKDDILHKLVLGINEIELSVRSTNCL
SNANIETIGELVIMPEPRLLQFRNFGKKSLCEIKNKLKEMKLELGMDLSQFGVGLDNVKE
KMKWYAEKIRSSKNTKG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagttcacacaatttactttataacaaatttgagttgcctgaatcggtgaag
atgtctcctgtggaaggggctgttggcggcattgataaagtagctcgatttgttgcagat
cccttggaaaaagggatggggcacaccttgggaagcgccttgcgacgtgctctgttaatc
ggcttggaagctcctgctattgtctctttctctatgacaggagttttgcacgaatatatg
gcggtagaggggatcattgaagatgttaccaatatcgttttgaatttgaaaggttcgttg
cttaaaaagtatcctctacaagattgtgaaggtggaagatgctctcaaaagttacgagct
acgatttctattgatgcatccgatttagctgccgctggtgggcagaaggaagttacttta
ggagatttgctacaagaaggaacttttgaagcggtcaatcctgagcacgtaatttttacg
gtcacgcgtccaatgcaacttgaggttatgttgcgagttgcttttggtagaggatactct
ccttctgaaagaatcgttcttgaagaaagaggcatgaatgagatcgttttagatgcggca
ttctctcctgttgttctggttaactattttgttgaagacacccgcgttggacaagataca
gatttcgatcgtttagtgttgcaagtggaaaccgatggtcgtgtggctcctaaagaagct
gtagcttttgctacacagattttgagtaagcatttttctgttttcgaaaaaatggacgag
aagagaatcgtttttgaggaagcaatctctgtagagaaagaaaacaaagacgatattctt
cataaattggttttaggcattaatgagatagaactttctgtacgatctacaaattgttta
tctaatgccaatatcgaaacgataggggaattggtaattatgccagagcctcgtctgtta
caatttagaaatttcgggaagaagtctctctgcgagattaagaataaactgaaagaaatg
aaattagagttaggcatggacctcagccagtttggtgttggtctggataacgttaaagaa
aaaatgaagtggtatgccgagaaaattcggtcgagtaaaaataccaagggataa
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