Chlamydia trachomatis RC-L2(s)/46: CTRC46_02345
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Entry
CTRC46_02345 CDS
T02773
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ctry
Chlamydia trachomatis RC-L2(s)/46
Pathway
ctry03410
Base excision repair
ctry03430
Mismatch repair
ctry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CTRC46_02345
03430 Mismatch repair
CTRC46_02345
03440 Homologous recombination
CTRC46_02345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctry03400
]
CTRC46_02345
DNA repair and recombination proteins [BR:
ctry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CTRC46_02345
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CTRC46_02345
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CTRC46_02345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AGR94796
LinkDB
All DBs
Position
complement(513667..515421)
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AA seq
584 aa
AA seq
DB search
MEKGSLSSLGQKWDYPKHNEVFLKKILKEFHLHPAIAQVLISRGFQSIQEIRDFLYPQLS
SLHSTSLFLDMEKAVARLLQAKANNEHVMIYGDGDVDGITGVTLIVEFLQILGVKTSYCC
SGTLFKQHGETASLISQMLQDGISLLITVDCGITAGKEVQAINKQGIDVIVTDHHMPTGK
LPHCIAMLNPKLDKNPYPNKELTGVGVAFKLVCATYEELIQQDASWKDKIDLLRFLDLVS
LGTIADVGRLSGENRILVSYGIKEIAKGKRLGLKKLCSLSGVDKSEVSSTNLGIRITPKL
NSLGRLADSSQGVKLLLSQDPKNIGTIVSELSAVNQERQRIEAEVLRDVERILAANPKLT
AQSAIVLASPNWHSRVIPIISARLARTYNKPVAIIALQDGIGKGSLRTIGSFPLLGVLRK
CESFFLSYGGHDFAAGLMIKEDQVEGFRKKFIHLVSSSLRKDDAMRTLSLDVGMDFSRIN
RDLIASMELLEPFGKGNVSPVFYTKAIQVRYPKLLAGNHVKLYLNSGERNLEGTAFGQGD
KISLLKANWNIPLDIAYTLRIMRRSARGAIRLLIQDFRIQIPRL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggtagtttatcctcccttggacaaaaatgggattaccctaagcataatgag
gtctttctaaagaagatcttaaaagagtttcatcttcatcctgcgattgctcaagtgctc
atatctcggggatttcagtctatccaagagattcgagattttctgtatccccagctctcc
tcattgcactccacctctttgttcttagatatggagaaagctgtagcacggttactccaa
gctaaagcaaataatgagcacgtgatgatctatggagatggggatgtagacggtataaca
ggcgtgaccttgatcgttgaatttctacaaatacttggagtgaaaacaagttattgctgt
tccgggacattgtttaaacaacatggagagacagcttctttaatttctcaaatgctgcag
gatggtatttctcttttaattactgtggattgcggtatcacagcagggaaagaggttcag
gctatcaataaacagggtatagacgtgatcgttacggatcaccatatgcctacagggaag
cttccgcattgcattgcaatgctaaatcctaaattagataaaaatccttatccaaataaa
gagcttacaggagtaggagtcgcgtttaaattggtatgcgcaacctatgaagaattgatc
cagcaggatgcttcttggaaagacaaaatagaccttttgcgttttttagatttggtaagt
ttggggacgattgcagatgtagggaggctttcaggagagaatcgtatcttagtttcttat
ggaattaaagaaatagcaaaaggaaaacgattaggcttaaaaaagctgtgttcattatca
ggggttgataagtctgaggtatcgtcgaccaatctaggaattagaattactccaaaactc
aatagtttagggaggttggcagattcaagtcagggtgtaaagttacttttgtctcaagat
cctaaaaatattggaacgatcgtctcagagctttctgctgtaaatcaagagcgtcagcga
atagaagccgaggtactgcgcgatgtggaaaggattctagctgcgaatcctaagcttaca
gctcaatcagctattgtattagcttctcctaattggcactctagagtaatccccattatt
tctgctcgtttagcgcgtacctataacaagccagtagcaattattgctctccaagatggg
ataggaaagggatctttacgtactataggatctttccctttattaggagttcttcgtaaa
tgcgaatccttttttctatcgtatggcgggcatgatttcgctgccgggcttatgatcaaa
gaagatcaggtcgagggattcaggaaaaaatttattcatctagtgagttcttctttgaga
aaagatgatgcaatgcgtacgctttccttagatgttgggatggatttctctcgcatcaat
cgggatttaattgcttctatggagcttcttgagccttttggaaaagggaatgtatcccca
gtcttctatacaaaagccatacaggtacgttatccaaagttattagccgggaaccatgtc
aaattgtatttgaatagtggggagagaaacttggaggggacggctttcggtcagggggat
aagattagtctactcaaagcgaattggaatatacctttggatatcgcctatacgttacgt
attatgaggcggtcggctcgcggagcaattcgtttgttgattcaggattttcgtatacag
attcctcggttgtaa
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