Chloroherpeton thalassium: Ctha_1618
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Entry
Ctha_1618 CDS
T00726
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cts
Chloroherpeton thalassium
Pathway
cts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ctha_1618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cts03019
]
Ctha_1618
03110 Chaperones and folding catalysts [BR:
cts03110
]
Ctha_1618
03029 Mitochondrial biogenesis [BR:
cts03029
]
Ctha_1618
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cts04147
]
Ctha_1618
Enzymes [BR:
cts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Ctha_1618
Messenger RNA biogenesis [BR:
cts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Ctha_1618
Chaperones and folding catalysts [BR:
cts03110
]
Heat shock proteins
HSP60 / Chaperonin
Ctha_1618
Mitochondrial biogenesis [BR:
cts03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Ctha_1618
Exosome [BR:
cts04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ctha_1618
Exosomal proteins of other body fluids (saliva and urine)
Ctha_1618
Exosomal proteins of breast cancer cells
Ctha_1618
Exosomal proteins of colorectal cancer cells
Ctha_1618
Exosomal proteins of bladder cancer cells
Ctha_1618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACF14076
UniProt:
B3QSM9
LinkDB
All DBs
Position
1912877..1914529
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKEIHFDAEGRNALKRGVDKLADAVKVTLGPAGRNVIIDKKFGAPTVTKDGVTVAKEV
ELEDPVENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVTAGANPMDLKRGI
DKAVTGVIIELKKISRPIADKKEIAQVGCISANNDSEIGDLIAEAMEKVGKDGVITVEEA
KGTETELKVVEGMQFDRGYLSPYFVTNADSMEAVLDEPYILIYDKKISNMKELLPILEKT
AQSGRPLLIIAEEIEGEALATLVVNKLRGTLKVCAVKAPGFGDRRKAMLEDIAILTGGTV
ISEEKGYKLENATIGYLGQAGSVTIDKDNSTIVEGKGTEDDIKARINEIKNQVEKATSDY
DKEKLQERLAKLSGGVAVLNIGATTEVEMKEKKARVEDALHATRAAVQEGIVAGGGVALI
RAVTGLENVQVENEDQKTGLEIIRRALEEPLRQIVANTGTVDGSVVVMKVKEGKDDFGFN
ARTETFENMIAAGVIDPTMVTRTALENAASVAGLLLTTEAVISEKPEDEKMPPMPPGGGM
GGMGGMGGMY
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagaaattcattttgatgccgaaggtcgcaacgcgttgaagcgtggtgtt
gacaaactcgccgatgctgtaaaagtaacgctcggccctgctggtcgcaatgtcattatc
gataaaaaattcggtgctccaactgtgaccaaagacggtgttacggttgcaaaagaagtc
gagctcgaagatccagttgaaaacatgggtgcgcaaatggttcgcgaagtggcttccaaa
accagcgatgtggctggcgacggtacaaccaccgcaactgttttggctcaagctatttat
cgtgaaggtttgaaaaacgtcacagctggtgcaaatccaatggatttgaagcgcggaatc
gacaaagccgttactggtgtgattattgagctcaaaaaaattagccgtccaattgctgat
aaaaaagagatcgctcaagttggttgcatttccgcaaacaacgattccgaaatcggcgac
ttgatcgcagaagcgatggaaaaagttggtaaagatggcgtaatcaccgttgaagaagca
aaaggtacagaaacagaattgaaagtggttgaaggtatgcagttcgatcggggctacctt
tctccttactttgtaaccaatgctgactcaatggaagctgttcttgatgagccatacatt
ctcatttacgacaagaaaatcagtaacatgaaagagttgttgccgattcttgaaaaaacc
gctcaatcaggccgtccgcttctcattattgcagaggaaattgaaggtgaagcgcttgct
acacttgttgtaaacaaacttcgtggcacattgaaagtttgtgctgtaaaagctcctggt
tttggcgatcgtcgcaaagcgatgcttgaagatatcgctattctcaccggcggtacagtc
atctccgaagaaaaaggttacaaacttgaaaatgcaaccattggctaccttggccaagct
ggcagcgtaaccatcgataaagacaactcaacaatcgttgaaggtaaaggaacggaagac
gacattaaagctcgcatcaacgaaattaaaaatcaggttgaaaaagccacttccgactac
gacaaagaaaagctccaagagcgtttggctaaactttctggtggtgtagctgttttgaac
atcggtgcaacaaccgaagttgaaatgaaagaaaagaaagctcgcgttgaagatgcactt
catgctacacgcgcagctgttcaagaaggtatcgttgcaggtggcggcgttgcattgatt
cgtgccgttacaggtctcgagaacgttcaagttgaaaatgaagatcaaaagactggtctt
gaaatcatccgtcgtgcgctcgaagaaccacttcgtcagattgtggcaaacacaggcacg
gttgatggttctgttgttgtcatgaaagtaaaagaaggcaaagacgactttggcttcaac
gcacgcactgaaacttttgaaaacatgattgctgctggtgtgatcgacccaaccatggta
actcgtaccgcacttgaaaatgcagcatccgttgctggcttgcttttgactacggaagcc
gttatttctgagaagccagaagatgaaaaaatgcctccaatgcctcctggtggcggcatg
ggcggaatgggtggcatgggcggaatgtattaa
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