Chloroherpeton thalassium: Ctha_1717
Help
Entry
Ctha_1717 CDS
T00726
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cts
Chloroherpeton thalassium
Brite
KEGG Orthology (KO) [BR:
cts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cts03400
]
Ctha_1717
DNA repair and recombination proteins [BR:
cts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ctha_1717
Archaeal homologous recombinant proteins
Ctha_1717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_15
SMC_N
Rad50_zn_hook
AAA_21
ABC_tran
AAA_29
KR
DUF4054
Motif
Other DBs
NCBI-ProteinID:
ACF14174
UniProt:
B3QT75
LinkDB
All DBs
Position
complement(2038201..2040825)
Genome browser
AA seq
874 aa
AA seq
DB search
MIPKKLRLKNFLSYGEPMQELDFDRFHVACLVGSNGSGKSSLIEAIGWCVWGEGRAKTAE
LIHEGATEARTEFEFVANDAIYKIVRIAKKKKNHRAEEQLEFQVFSPETARFVSLTEPSL
SKTEARILETLGIDYETFISSAFIVQGRANEFTQKSARDRKKILTQILRIDRYQKLSERA
HDKAKEIGLSISRTQGNIEMLEADLAKEDDLQARLNELKAELPTLETAYHAEKAALAALE
EKLQTLKQQAFEAGQLREQKIRTEKMLAEAESGLAEKEAEQNRLEKLITKRAEIEAREHA
FEKVQQAISKIEALAKEAGLLEREKIQREAARKEAINQHENEVRFAKDAAERHAAELHEF
QEKIAVLETRLKRVAEVEKEKSCVAKKRQAFEKLAEEKNQIYERISKLKAQIARADEETE
DITNKGKTLKDINTAECPLCRSPLDEQHRQHILDEYRNAFRELQNLQAVCRKDLEQEEKS
LRQIKAKEAERQKIDQAYLALERQLAAFEAEARQLDELKERIPDLEGKKQAASQKLAALL
DAERIGKYLQHENARITETETKLRLLGYNAEQHEQLRLEFQALSGVPREVLELAHATANL
VKTKTDIAALREKQAELTAHIAEIDSTLNVLQAKLSDGALLKDEHEASKRAFQEKEADFQ
KGLVETQSYERELERLKQKAAEKKSLEDSIAKESEAQDIYAFLKEAFGVNGIQSLLIENT
VPELQQEANALLQKLTMNRMSIMIRTQKPLKTKDEMVESLEIDISDATGEVRDYNTFSGG
EKYRVDLALRIALSKLLAAQSGVNVKMLIIDEGFGTQDEDGLEAIIDSIDKISDEFEKII
LITHLEKLRDAFEMKITVEKEPARGSFFSVATES
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgattcctaaaaagttacggctgaaaaatttcctcagttatggcgaacccatgcaggag
ctggatttcgaccgctttcatgtcgcgtgtctcgtgggttcaaacggctcgggaaaatcc
agtttgattgaggccattggctggtgcgtttggggcgaaggccgcgccaaaacggcggaa
ctgattcacgaaggcgcaaccgaagcgcgaacggaatttgagttcgtcgccaacgacgcg
atttataaaatcgtgcggattgcgaaaaagaagaagaatcaccgcgccgaagagcaattg
gaatttcaagtgttcagcccagaaactgcacgatttgtgtcgctcaccgagccctcgctc
agcaaaaccgaagcgcgaattttagaaacactcggcatcgactacgaaacttttatcagc
tcggcgtttatcgttcaaggtcgcgcgaatgagtttacccaaaaaagtgcgcgcgatcga
aaaaaaatcctcacgcaaattctgcggattgatcgctatcaaaaactttccgaacgggcg
catgacaaggccaaagaaatcggcctgagcatcagtcgcacacaaggcaacattgaaatg
ctcgaagccgaccttgccaaagaggacgatttgcaggctcgcttaaacgagttgaaagcg
gagttgcccacgcttgaaacggcctatcatgcggaaaaagccgcgctcgccgcgcttgaa
gaaaagctgcaaacgctgaaacagcaagcctttgaggccggacaacttcgcgaacagaaa
attcgcacggaaaaaatgctcgccgaagctgaaagcggtttggcggaaaaagaagccgaa
caaaaccggcttgaaaagttaatcacaaagcgcgccgaaattgaggctcgcgagcacgca
tttgaaaaagttcagcaggcaatttcaaaaattgaggcgcttgccaaagaagccggtttg
ctggagcgcgaaaaaatccaacgggaagccgcgcgcaaagaggccatcaaccagcacgaa
aacgaggttcgctttgcaaaagatgccgccgaacgccatgccgccgaacttcatgaattt
caggaaaaaattgcggttctcgaaacgcgactgaaacgcgtggctgaagttgaaaaggaa
aaatcgtgcgttgccaaaaaacggcaagcatttgaaaaactggctgaggaaaaaaatcaa
atttacgagcgaatctcgaagctcaaagcccaaatcgcccgcgcggacgaggaaacagag
gacatcacaaataagggaaaaacgctcaaggatattaacacggcagaatgtccgctttgc
cgctcgccgctcgacgagcagcatcggcagcacattttggacgaatatcgaaatgcgttt
cgcgagttgcaaaatcttcaagctgtttgccgaaaagatcttgagcaagaagaaaagtcg
cttcggcaaatcaaagcaaaggaagctgaacggcaaaaaatcgatcaggcgtatctggcg
ttggagcgacagcttgccgcatttgaggccgaagcccgccaacttgacgaattgaaagag
cgcattcccgaccttgaaggaaaaaaacaagcggcctcacaaaagttggccgcacttttg
gacgccgagcgcattggaaaatatcttcaacatgaaaacgcgagaatcactgaaacggaa
acaaaacttcggttgctgggctacaacgcagagcagcacgagcaattgagattggaattt
caagcgctctcgggcgtgccgcgcgaagtgttggaactggcacatgcgacggcaaatctt
gtgaaaacaaaaacggacatcgccgcgcttcgggaaaaacaagctgaacttacagcgcat
attgccgaaatcgattcaacattgaatgtgcttcaggcaaagctttcggatggcgcactg
ttgaaagacgagcatgaggcaagcaagcgtgcttttcaggaaaaagaagcggattttcaa
aaagggcttgtggaaacgcaaagctacgagcgcgaacttgaacgcctgaagcagaaagcc
gcggagaaaaaatcacttgaggatagcatcgcaaaggaatcggaagcgcaggacatttac
gcgttcctcaaagaagctttcggcgtgaatggcattcaaagtttgctgattgaaaacacc
gttcctgagcttcagcaggaagccaatgcgctcttgcaaaaactgaccatgaaccggatg
tcgatcatgattcgcacacaaaagccgctgaagacgaaggacgaaatggtggaaagtttg
gaaattgatatttcggacgcaaccggcgaagttcgcgattataatactttctcgggcggc
gaaaaatatcgcgtggatttggcgcttcggattgcgctctcgaagctgctcgccgcgcaa
tcgggcgtcaatgtcaagatgctgatcatcgacgaaggttttggcacgcaggacgaagac
ggactggaggccatcatcgattcaattgacaaaatcagtgacgagtttgagaaaatcatt
ttaatcacgcacttagaaaaactccgcgatgccttcgaaatgaaaatcacagttgaaaaa
gaacccgcgcgcggctcattcttttccgtcgcgacggagagctaa
DBGET
integrated database retrieval system
