Chloroherpeton thalassium: Ctha_1837
Help
Entry
Ctha_1837 CDS
T00726
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
cts
Chloroherpeton thalassium
Pathway
cts02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cts00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ctha_1837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cts03000
]
Ctha_1837
Transcription factors [BR:
cts03000
]
Prokaryotic type
Helix-turn-helix
Other families
Ctha_1837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
AAA_5
AAA_2
HTH_50
HTH_30
HTH_1
AAA
bpMoxR
nSTAND3
AAA_7
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ACF14294
UniProt:
B3QTU6
LinkDB
All DBs
Position
2173842..2175431
Genome browser
AA seq
529 aa
AA seq
DB search
MQTRFCIGQSCHHTYVQMDTICRAEMIASLFRISKVVIETESLPETLSILLKIMKEDMGV
VKGIVCLFNSRTGKIFIHDSIGLTKEEETRGVYSIGEGIIGKVVETGQKIVVPRISQEPN
FLNRTKSLSNQKDAELSFVCIPILHGKKVLGAISVVRVCGTPDALNYDVELLGIIAAMIA
QAVELYLLENEDKGLLRIENERLRDALKERFHPSNIIGNSKPMLEVYALINKIAKTKSTV
LILGESGVGKERVASAIHYNSPDANKPFIKFNCAALPESVIESELFGHEKGAYTGADKIR
KGRFEEADGGTIFLDEVGELSLPMQAKLLRVLQERIFERVGGNKPIKVNIRIIAATNRDL
AKMAKDGQFRQDLYYRLNVFPIVIPPLRERSSDILTLAEYFVSHFVKKFNKEIKSISVPV
QEMLLAYSWPGNVRELENVIERAVILTEDNIIHSCNLPLSLQAPVLATASFKKGLLAKLD
SIEYDMIVEALLSCKGNISKAAQKLGMTRRALSLRMQKFGINYKKYRLK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacacgtttttgtatcggccaaagttgtcaccacacttacgtgcaaatggatacc
atctgtcgggcggagatgatcgcctcgctatttcggattagcaaagtggtgattgaaacg
gagagtttacccgaaacgctttcgatcctattgaaaataatgaaagaggatatgggcgtg
gtgaaaggaattgtctgtctgttcaatagcagaacgggaaaaatatttattcacgacagc
attggactcacaaaagaggaagaaacacgaggcgtttattcgattggagaaggcattatc
ggaaaagttgtggagaccggacaaaaaattgtggttccgcgcatcagtcaagagcctaat
tttttgaatagaacgaaaagtttatcgaatcaaaaagatgctgagttgtcctttgtctgc
attccgattttgcacgggaaaaaagtgctgggcgcaatcagcgtggtgcgtgtgtgcggc
acgccagacgcgctcaactacgacgtagaattgcttggcattattgcagcgatgatcgcc
caagccgttgaactttatttgcttgaaaatgaagacaaagggttgctgcgtatagagaac
gagcgccttcgcgacgcactcaaagagcgctttcatccgtcgaacatcatcggaaattca
aagccgatgctggaagtgtatgcgctgattaataaaatcgccaaaaccaaatcgaccgtg
ctcattttgggtgaaagcggcgtggggaaagaacgcgtcgccagcgcaattcattacaac
agccccgatgcaaataagccttttatcaagtttaactgtgcggctttgcctgaaagtgtt
atagaaagcgaactgtttggccacgaaaaaggcgcttacacaggcgcagacaagatcaga
aaaggtcggttcgaagaggccgacggcggcacgatttttttggatgaagtcggagaattg
tctttgccgatgcaagccaagctgctgcgtgttttgcaagaaagaatttttgaacgcgtt
ggcggaaacaagcccattaaggtcaatattcgaataattgccgccacaaatcgcgatttg
gccaaaatggcaaaggatggtcaatttaggcaagacctctattatcggctgaatgtgttt
ccgattgtgattccgcccttgcgcgaaagaagcagtgatattcttacgctggccgaatat
tttgtctctcattttgtgaagaaattcaacaaagaaattaagagtatttctgttccggtt
caggaaatgctgctggcgtactcatggccgggaaatgtgcgcgaacttgaaaacgtgatt
gagcgagccgtgattcttactgaagataatattatacatagttgtaatttgccgttgtcg
cttcaagcgcccgttttggcaaccgcttctttcaagaaagggctgttggccaagttggat
tcaatcgaatacgacatgattgtggaagcgctgctaagttgcaaagggaatatttcgaaa
gccgcgcaaaaattaggcatgacacgaagggcgctaagcttgagaatgcaaaaatttggc
atcaactataaaaagtatcggttgaagtaa
DBGET
integrated database retrieval system
