Chloroherpeton thalassium: Ctha_1909
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Entry
Ctha_1909 CDS
T00726
Name
(GenBank) Ig family protein
Organism
cts
Chloroherpeton thalassium
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
He_PIG
Big_9
Cadherin_5
Cadherin_4
PKD_4
PKD
Cadherin
LVIVD
Big_13
Bact_surface_Ig-like
Beta-prop_THOC3
Beta-prop_EML_2
WD40_CDC20-Fz
Motif
Other DBs
NCBI-ProteinID:
ACF14363
UniProt:
B3QUB4
LinkDB
All DBs
Position
2262911..2267440
Genome browser
AA seq
1509 aa
AA seq
DB search
MKKDFNPVVQPSQFFDVNGVMSVLSKRTVIFKNLLFVFLFLSLASPVFSQSIEESKLERA
ETVLIGNDVISAVHVEDSTLFVASYSNGLFLFDISKPFEPRSLGRTTELDIPTNGVVKKG
NYLMIGDNVDGVLVYDITSPEEIKLVTKLKTESGEAWDILADKEKNTLYVATGKIGLEIW
DISDPANGKLISKLDDIQWDYAWGLALDEEKNRLFVSDKANGVKIFDVSKPTKPAIVNSY
KTSAQNHFALPYDTLLFLANGPGGFEVLSINNIQKPKTLFKDTYSAPFVTGITLYKKNSN
FLFIGTGRSGLVVYHIPSILKGSTNPVVKADKISSDYGRITQYEHGFYVATNKGVLIYNF
DLAPYFTDVTNQVIDENQTLNYSFKGVDPDGSPISISLIPLDKMPDSLQYDKETSNIVWK
PSYEESGVYDFRVRINELTPDNMFAEAPFKIEVKHVNRAPSLPELKDLLVDEDKKLEYQI
PEGSDPDREDEGKLTYVAKNLPFGAVFDDKTRQFTWVPSFSQSGQYVVTIFVKDSNSDGN
GILTDSKDLTIRVDNVNRKPTFTRMDRQIFNENSESSFTISAEDPDTEDKGKLTYSAGKL
PDGASFDPDTQTFSWMPTYEQAGDYTVIFSVQDQGLNSLLFPNPGFVYMDTMAVNITVKQ
TNRSPHFVQVEPKEVNENQSLSFKVEANDPDREDIGKLVFSASSLPEGAIFDPKTQTFSW
KPTYEQSGNYTVAFSTIDSGIDGMKLSDQMRVSINVPNANRPPVFTQPADMQGQEVTPLS
FSLTVSDPDREDTGKLKITSRSLPEGATLAGNIVSWTPTYEQAGKYKVGYVVTDFEGLVD
SVSHYITITQKNRAPKFVALNTQSGKENDLLTFSVSANDPDKEDLNMLKYAAEDLPQGAS
FNPKTQTFSWKPTYEQSGNYAVKFIVTDKGIDGNVLSDNMTVPVTIQHVNRAPQIYQFKD
TTINEDSEMRYFVGVFDPDVEDDGKLTVTAKSIPEGAILSGQNFTWKPTYEQSGKYTLVF
QVADLGGLTATTTNTIVVKNVNRSPEIEIPGGIVKEEEEEIVYKVKARDPDKEDEGKLKV
EASGVPKGAVFKGGELRWKPTYEQSGVYTISYTVTDKEGLKDTKSHTITVQNKNRAPEVT
VVEKVEGKEEEALGFSVKVSDPDKEDEGQLKVTTMGLPEGSVYEKGKFSWKPTYEQSGVY
NISFTVTDNGALSDKKTVVVTIANKNRKPELEVPAEVEAKENEGISLEIKASDPDKEDEG
QLKVTAMGLPEGSSLSNGKFSWQPTYEQSGVYKIIYTVTDKEGLKDTKGETIVVKNVNRS
PEIEIPGGIVKEEEEEIVYKVKARDPDKEDEGKLKVEASGVPKGAVFKGGEFRWKPTYEQ
SGVYTISYTVTDKEGLKDTKSHTITINDKNRMPTIKLSVGKFVSAMENEPLVISVAGADL
DKEDKQLMLSAESLPSGAMFDSNMGKFSWTPTEGQAGAYTVIFKVQDTKGGEAVSSVSIT
VAKAKPQKK
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagactttaaccctgttgttcagccaagccaattttttgatgtaaatggagta
atgtcagtcttgtcaaagagaacggtgattttcaaaaatttactttttgtgtttctattt
ctttctttggccagtcccgttttttcgcaaagcatagaagaaagcaaattagaacgagca
gaaacggtccttattggaaacgatgtgatctcggctgttcacgttgaagatagcacgctt
ttcgttgcaagttacagtaatggtttattcctttttgatatttcaaagccttttgagcct
cgatctctgggtcgcacaacagagcttgatattcctacaaatggagtggtaaaaaaaggc
aactatttaatgattggcgacaatgtagatggggttttggtttatgatattacttctcct
gaagaaataaagttagtgacgaagctaaaaacagagtcgggggaagcttgggatattctg
gcagataaggaaaagaacacgctctatgttgcaacaggaaaaataggccttgaaatttgg
gacatatcagatccggcaaacggcaaactgatttctaaattagatgatattcaatgggac
tatgcctgggggcttgcgttagatgaggaaaaaaatcggctttttgtgagtgataaagcc
aatggggtgaaaatttttgacgtttcaaaacctaccaaaccagcaatagtaaattcatat
aaaacttcagcgcaaaaccattttgcccttccctatgatactttgttatttttggctaat
ggtcccggcggttttgaagtcttaagcattaataatattcaaaagccaaaaacacttttc
aaggatacctattccgcgccgttcgttacaggaataaccttatataaaaaaaatagcaat
ttcttgtttattggtacaggcagaagtgggctggtggtttatcacattccaagcatttta
aaaggcagcaccaatccggtggtaaaagccgataagattagttctgattacggtagaatt
actcagtatgaacatggattttatgtggcgacaaataaaggcgttttgatatataatttt
gatttagccccatattttacagatgttacaaatcaagtcattgatgaaaatcaaacatta
aattattcatttaaaggtgtagacccagatggaagtcctatcagcattagtttaattcct
cttgataagatgccggatagccttcaatacgataaagaaactagcaacatcgtttggaaa
ccttcttatgaagaatcaggtgtttatgattttagggtcagaattaatgaactcacacct
gataatatgtttgctgaagcgccatttaaaattgaggtcaagcatgtgaatcgcgcgcca
agtcttccagagctgaaagatctgcttgtagatgaggataaaaagttagaatatcaaatt
ccagaaggttcagatcctgaccgagaagatgaaggaaaactaacttatgttgcgaaaaac
ttaccgtttggtgctgtttttgacgataaaacacggcagtttacttgggtgccgtccttt
tcgcaatcagggcagtatgttgtgactatttttgtgaaagattccaattctgatggaaac
gggattctaacagactcaaaagacttaaccattcgtgttgataatgtaaatcgtaagcct
acatttacacggatggacagacaaatttttaatgaaaattcagaaagctcttttacaatt
tctgctgaagatcctgatacagaagataaaggcaaattaacctattcggcaggaaaactt
cctgatggcgccagctttgatccagatacacaaactttttcatggatgccaacctacgag
caagcaggcgactatacagtgatattttcagtacaagatcaagggctaaattctttgttg
ttcccgaatcctggatttgtatatatggatacgatggctgtgaatataactgtgaagcag
acaaaccgctctccgcattttgtacaggttgagccgaaagaagtcaatgaaaatcaaagt
ttatcttttaaggttgaagccaatgatcctgatagagaagatattgggaagttagtgttt
tcagcttcatccttgcctgagggggctatttttgatccaaaaacacaaactttttcgtgg
aagccaacctatgaacaatcgggaaactatacggttgctttttcaacgattgactctgga
attgatggcatgaaactttctgatcagatgagagtttccatcaacgttccaaatgcaaac
cgtccgcctgtttttacacagcccgctgacatgcagggtcaagaggttacaccgctaagt
ttttctctaactgtatccgatccagatcgtgaagatacaggtaagttgaaaattacttct
cgtagtttaccggagggggctacattagctggaaatattgtctcgtggacgcctacttat
gaacaagctggaaaatataaggtagggtatgttgtaaccgactttgaaggtttagtcgat
agtgtctcgcactatattacgattacgcagaaaaacagagctccaaaatttgtggcttta
aatacacagtcaggcaaagaaaatgacctcttaacatttagtgtgtcggcaaatgatcct
gataaagaggatctcaacatgttgaaatatgccgctgaagatttaccgcaaggtgcttct
ttcaatccaaaaacacaaactttttcgtggaaaccaacctatgaacaatcaggtaattac
gcggtcaagtttatagtgactgataaagggattgatggcaatgtattgagcgataatatg
actgtacctgtaacgattcagcacgtgaatagagctccgcagatatatcaattcaaagac
acaacaatcaatgaagactcggaaatgaggtactttgttggtgtttttgaccctgatgtt
gaagacgatggtaagttgaccgtgacggcaaaatcaatacctgagggtgcgattttaagc
gggcaaaatttcacttggaaaccaacatacgagcagtcaggaaagtatacgcttgttttt
caagtggctgacttgggtggattaaccgcaacgacgacaaacacgatcgtagtaaagaat
gtaaatcgatcgccggagatagagatacctggagggatagtgaaagaggaagaggaagag
atcgtgtataaggtaaaggcgagggatccggataaagaagatgaagggaagttgaaggta
gaggcaagtggtgtgccgaagggagcggttttcaaaggaggggaattgagatggaagccg
acgtatgaacagtcaggtgtatatacgataagctacacggtaacagataaggaagggtta
aaggacacgaagtcgcatacgatcacggtacagaacaagaatcgagcgccggaagtgacg
gtagtggaaaaggtagaagggaaagaggaagaggcgttaggatttagtgtgaaggtgtcg
gatccggataaagaggatgaaggacagttgaaagtgacgacgatgggattaccggaaggg
tccgtgtatgagaaagggaagtttagctggaagccgacgtatgaacagtcgggagtatat
aatataagcttcacggtaacggacaatggggcgttgtcggataagaagacggtggttgta
acgatagccaacaagaaccggaagccggagttggaagtgccggcagaggtagaggcgaaa
gagaatgaagggataagtcttgagataaaggcgagtgacccggataaggaggatgaaggt
cagttgaaagtgacggcgatggggttaccggaagggtcgagtctgtcaaacgggaagttt
agttggcagccgacgtatgaacaatcgggagtatataagataatctacacggtaacggat
aaagaagggttaaaggatacgaagggagaaacgatcgtagtaaagaatgtaaatcgatcg
ccggagatagagatacctggagggatagtgaaagaggaagaggaagagatcgtgtataag
gtaaaggcgagggatccggataaagaagatgaagggaagctgaaggtagaggcaagtggt
gtgccgaagggagcggttttcaaaggaggggaattcaggtggaagccgacgtatgaacag
tcaggcgtatatacgataagctacacggtaacagataaggaagggttaaaggacacgaag
tcgcatacgatcaccattaatgacaagaacagaatgccaacgattaaattgagtgtcgga
aaattcgtctctgcgatggaaaacgagccccttgttatttccgtggcgggagctgatctt
gataaagaagataagcaattgatgttatcagctgagtcattgccttcaggcgcaatgttt
gattccaacatggggaaattttcatggacgccaactgaagggcaagcaggtgcttatacc
gtaatttttaaggtacaagatacaaaaggcggtgaagctgtttcatctgtctcaattacg
gtagcgaaagcgaaaccacagaaaaagtaa
DBGET
integrated database retrieval system
