Chloroherpeton thalassium: Ctha_2252
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Entry
Ctha_2252 CDS
T00726
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cts
Chloroherpeton thalassium
Pathway
cts00061
Fatty acid biosynthesis
cts01100
Metabolic pathways
cts01212
Fatty acid metabolism
cts02024
Quorum sensing
cts04146
Peroxisome
Module
cts_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cts00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Ctha_2252
00071 Fatty acid degradation
Ctha_2252
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Ctha_2252
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ctha_2252
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cts01004
]
Ctha_2252
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cts04147
]
Ctha_2252
Enzymes [BR:
cts01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Ctha_2252
Lipid biosynthesis proteins [BR:
cts01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Ctha_2252
Exosome [BR:
cts04147
]
Exosomal proteins
Exosomal proteins of breast milk
Ctha_2252
Exosomal proteins of breast cancer cells
Ctha_2252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACF14703
UniProt:
B3QW49
LinkDB
All DBs
Position
complement(2704513..2706315)
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AA seq
600 aa
AA seq
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MNSPVRLFDLLEYQLKHFPKEDALAYKVDGIWNKFSTQKFAEMAGEVALGLDQLGVRKGD
MIANITENNRPEWNFLDMGMMSIGAVHVPLYANLTKDDYAFILSDSGAKFIFVSSASLYE
TISSIAPSIPSLERIYTYDFIEEANHWHEITTLGKSVANPNERLASLKSRVSESDLAMLI
YTSGTTGTPKGVCLTHKNLMANALAGAARMKSNPTERAISFLPLCHSFERIINCMYIYQG
CSIYYAQSLQTVADDMKEVRPHVFATVPRMLEKVYDKILSKGNELTGIKYMLFKWSLGVG
FKYDPSKASSLWYAIQYRLADKLVFPKWREAFGGSVRAVVSGGAALQPRLAKLFFAAGIP
IYEGYGLSETAPVISVNYPETGGFKIGTVGTVIEGGEVRIAGDGEILYKGPNVMQGYHNR
EDLTQEVIDSDGWFHTGDIGEFDGPFLMITDRKKELFKTSGGKYIAPQVIENKMKESRFI
EQIMVIGEGRKFPAALIVPNFLYLKAYCEHKGIHYTTNEEILMNPLIQQKFEAHVQKYNE
PFAQYMKIKKFIVLDHEWTAETGELSPKLSLRRKVILHRYHEQIERLYQNETLTTQKITA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaactcaccggttcggttatttgatttgctggaatatcaactgaagcattttccaaaa
gaagatgcgcttgcctataaagtagatggcatttggaataaattttccacgcaaaagttt
gctgaaatggccggcgaggtggcacttggattggatcagcttggggttcgaaaaggcgat
atgattgctaacatcacggaaaataatcgtccagaatggaacttcttagatatgggcatg
atgagtattggggctgttcatgtcccgctttatgctaacctaaccaaagacgattatgcg
tttattttgagcgattcgggcgcaaaattcatatttgtttccagcgcaagcctttatgaa
accattagcagcattgcaccaagcattccttctctcgaacggatctacacctacgatttt
atagaagaagcaaatcattggcatgaaattaccacgctgggaaaatccgtagccaatcca
aatgaacgactggcgtcgttaaaatccagggtgagcgagtcggatttagccatgctgatt
tatacgtctggcacaaccggcacgccaaaaggtgtttgcttaacacacaaaaacctcatg
gcgaatgcgcttgctggcgctgcgagaatgaaaagcaatccaactgagcgcgcgatttct
tttttgcccctttgccatagttttgagcgcattattaattgcatgtacatctatcagggc
tgttcgatttactacgcgcaaagtcttcaaacggtcgcggatgatatgaaagaagtcagg
ccgcatgtgtttgccacggtgccgcgcatgttggaaaaagtatatgataaaatcctttcc
aaaggaaacgagctcaccggcataaagtacatgcttttcaagtggtcgcttggcgttggg
tttaaatacgacccgtcgaaagcgagcagcctgtggtatgcgattcagtaccgtttggca
gataagctagtttttcccaaatggcgagaggcgtttggcggtagcgttcgagcggttgtt
tcaggtggggcggctttgcagcccaggcttgcaaaacttttttttgcggcaggcattcct
atctacgaagggtatggtctttcggaaacagcgccagtcatttccgtgaattatcccgaa
accggcggtttcaaaattggcacagtgggcacggtaattgaaggcggggaagtcaggatt
gcaggagatggcgagattttgtacaaaggccctaatgtgatgcaaggctatcacaaccgt
gaggatctcacgcaagaagttattgatagcgatggctggtttcacacgggcgatattggc
gagttcgatgggccgtttttaatgattaccgatcgcaaaaaagagctctttaaaacttct
ggcggcaaatacattgcgccgcaggtcattgaaaataagatgaaggagtcgcgctttatc
gagcaaatcatggtcattggtgaagggcgaaaatttcctgccgcactgattgtcccgaat
ttcctttacttaaaagcttactgcgagcataaaggcattcattacaccacgaacgaagag
attttgatgaatccgctcatccagcagaagtttgaagcacatgttcaaaaatacaacgag
cccttcgcgcagtatatgaaaatcaaaaagttcattgtcttagatcacgaatggacagcg
gagacgggagaactctcgccaaaactaagccttcgccgcaaagtcattttgcatcggtat
cacgagcaaatcgaacggctctaccaaaatgagactttaacaactcaaaaaatcacggca
taa
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