Comamonas thiooxydans: CtCNB1_0366
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Entry
CtCNB1_0366 CDS
T01109
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ctt
Comamonas thiooxydans
Pathway
ctt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CtCNB1_0366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctt03400
]
CtCNB1_0366
Enzymes [BR:
ctt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CtCNB1_0366
DNA repair and recombination proteins [BR:
ctt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CtCNB1_0366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
UvrD_C_2
SH3_13
AAA_11
Helicase_RecD
AAA_22
PhoH
UvrD-helicase
SLFN-g3_helicase
AAA_28
DEAD
AAA_16
Mg_chelatase
AAA_5
nSTAND3
Herpes_Helicase
ResIII
HTH_65
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ACY31112
LinkDB
All DBs
Position
405634..407724
Genome browser
AA seq
696 aa
AA seq
DB search
MKGRRKADLQTLDLFAAPADGDTIAPGTTDWLAALERLADAGLLRRLDSALAAFVAAQDA
EAGPALLVATAVLAQMEGRGHSCLPLKALAGDPNQILAWPKEAERLQQSLWEQLPGRLAD
WLQALRRSPVVRVVQPGAPAADRGQPLVLLDGAAPLLYLRRYWDYERSVAAHIAQRTAAD
AVALDEPRVREWLGRLFSSSAAAANAVDWQKLACALALRGHMSVITGGPGTGKTYTAARL
LALLFATAPDAAQLRVALAAPTGKAAARLKQSIDSSLLELKEAVGRELDLEALVKRMGAA
RTLHSLLRARPDTRRFAHHAGNPLDVDVLIVDEASMIHLEMMAALLQALPPTARLILLGD
KDQLASVEAGAVLGDLCRDAQRGNYAPDTAAYVERVTGQSLPAQYLAPARALPLAQHTVM
LRESRRFGGPIGLLAQAVNAGDAPSAMALLRTQTQAGLHAELWAREGGEVEAVVRSAVQG
RGGMASYAAYAEVLAQHGQGKGCGFATEAEHRQWVREVLAAFDRYRLLCAVRDGSWGVAG
LNRAVEQALQAMGAIRKEGEWYMGRPVMVTRNDAQLGVFNGDIGMALPSFADPARLRVYF
MQGELLHHVSTARLAHVETAFAMTVHKSQGSEFEHTALVLAAQGGNVLSRELVYTGITRA
RKAFSLWTEVPGLLVSAMGSPTQRSSGLLGFMERAQ
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggcgccgcaaagccgatctgcagacgctggacctgtttgcagcccccgcggat
ggcgacacgattgcaccgggcaccacggactggctggccgcgctggagcgattggccgat
gcgggtctgctgcgccgcctggacagcgccctggcggcctttgtagcagcgcaggacgca
gaggcaggacctgcgctgctggtagccaccgccgtgctggcgcagatggaggggcgcggt
catagctgtctgcccttgaaggcgctggctggcgatcccaatcagattctcgcctggccc
aaggaggccgagcgactgcagcaatcgctatgggagcaattgcccggccggctggctgac
tggctgcaggccctgcgtcgcagccctgtggtgcgtgtcgtgcagccaggagcaccagcg
gctgaccgaggccagccgctggtgctcctggacggcgctgcgcccttgctgtatctgcgc
cgctattgggactacgagcgcagtgtcgccgcccatatcgcccagcgcacggcggccgat
gcggtggcgcttgacgagcccagggtgcgcgaatggctggggcggcttttcagctcgtct
gccgctgccgcaaatgcggtggactggcaaaagctggcttgcgcgctggcgctgcggggg
catatgtccgtcatcaccggcgggccgggcacgggcaagacctatactgctgcccgcctg
ctggcgctgctgtttgccacggcgccggatgccgcgcagctgcgcgtcgcgctggctgcg
ccaaccggcaaggcggcggcgcggctcaagcagtccatcgatagctcgctgctggagctg
aaggaggccgtgggccgagagctggatctggaagcgctggtcaaacgcatgggggcggca
cgcaccctgcattcgctgctgagggccaggcctgacacgcggcgctttgcccaccatgca
ggcaatccgctggatgtcgacgtgctcatcgtcgatgaggcctccatgatccacctcgag
atgatggccgcgctgctgcaggccctgccgcccacagcgcgcctgattctgctgggcgac
aaggatcagctcgcctcggtggaggccggtgccgtgctgggcgatctgtgccgcgatgcg
cagcggggcaattacgcgccggacaccgctgcctatgtcgagcgtgtgacgggccagtcc
ctgcctgcacagtacctggcgccggccagggccctgccgctggcccagcacaccgtcatg
ctgcgcgagagccgccgctttggcggccctatcggtctgctggcacaggccgtgaatgcc
ggcgatgcaccttctgccatggcgctgctgcgcacgcagacccaggccggcctgcatgcc
gaactctgggcgcgcgaaggcggtgaggtcgaggccgtggtgcgcagcgccgtgcaaggc
cgtggcggaatggccagctatgccgcctatgccgaggtgctggcacaacatgggcagggc
aagggatgcggctttgccaccgaggccgagcaccggcaatgggtgagggaggtgttggcc
gccttcgaccgctaccgcctgctgtgcgccgtgcgcgacggcagctggggcgtggcgggc
ctgaaccgcgcggtggagcaggccttgcaggccatgggcgccatacgcaaggagggcgag
tggtatatgggtcgtccggtaatggtcacgcgcaacgatgcgcagctgggcgtgttcaac
ggcgatatcggcatggccctgcccagctttgccgacccggcgcggctgcgcgtgtacttc
atgcagggcgagctgctgcaccatgtcagcacggcgcgcctggcccatgtggagaccgca
tttgccatgacggtgcacaagagccagggctcggagttcgagcatacggcgctggtgctg
gccgcgcagggcggcaatgtgctcagccgcgagctggtctataccggcatcacgcgggcg
cgcaaggcgttctcgctgtggaccgaagtgcccggcctgctggtgtcggcgatgggcagt
cccacgcagcgcagcagcggtttgctgggattcatggaacgtgctcagtag
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