Comamonas thiooxydans: CtCNB1_0643
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Entry
CtCNB1_0643 CDS
T01109
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ctt
Comamonas thiooxydans
Pathway
ctt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CtCNB1_0643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctt03019
]
CtCNB1_0643
03110 Chaperones and folding catalysts [BR:
ctt03110
]
CtCNB1_0643
03029 Mitochondrial biogenesis [BR:
ctt03029
]
CtCNB1_0643
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ctt04147
]
CtCNB1_0643
Enzymes [BR:
ctt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CtCNB1_0643
Messenger RNA biogenesis [BR:
ctt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CtCNB1_0643
Chaperones and folding catalysts [BR:
ctt03110
]
Heat shock proteins
HSP60 / Chaperonin
CtCNB1_0643
Mitochondrial biogenesis [BR:
ctt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CtCNB1_0643
Exosome [BR:
ctt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CtCNB1_0643
Exosomal proteins of other body fluids (saliva and urine)
CtCNB1_0643
Exosomal proteins of breast cancer cells
CtCNB1_0643
Exosomal proteins of colorectal cancer cells
CtCNB1_0643
Exosomal proteins of bladder cancer cells
CtCNB1_0643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
ACY31389
UniProt:
A0A096ERZ2
LinkDB
All DBs
Position
complement(725896..727539)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLQNMGAQLVKEVASKTNDIAGDGTTTATVLAQAIVREGSKYVAAGLNPMDLKRGI
DKAVAALVEELKKQSKATTTSKEIAQVGTISANSDSDVGEIIAQAMDKVGKEGVITVEEG
KSLANELDVVEGMQFDRGYLSPYFINNPEKQAAILDNPFVLLFDKKISNIRDLLPTLEAV
AKAGRPLLIIAEDVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV
IAEEVGLSLDKVTLEDLGQAARVEIGKENTTIIDGAGAADEIEARVKQIRIQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RAKQAVGALATGNAEQDAGIKLVLKAIEAPLREIVANAGGEPSVVVNAVLNGSGNYGFNA
ANDTYGDMLEMGILDPTKVTRTALQNAASVASLLLTTECMIAEAPKADAAPAMPDMGGMG
GMGGMGM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtagttttcggcggtgaagcacgtgcacgcatggttgaaggcgta
aacatcctggctaacgcagtcaaggttaccctgggccccaagggtcgcaacgtggttctg
gagcgctccttcggcgcccccaccgtgaccaaggacggcgtgtccgtggccaaggaaatc
gaactcaaggacaagctgcagaacatgggcgcccagctcgtgaaggaagtggcctccaag
accaacgacatcgctggtgacggcacgaccaccgctaccgtgctggcccaagccatcgtg
cgcgaaggctccaagtacgtggccgccggcctgaaccccatggacctgaagcgcggcatc
gacaaggctgtcgccgccctggtggaagagctgaagaagcaatccaaggccaccaccacc
tccaaggaaatcgctcaagtgggcacgatctccgccaactccgactccgacgtgggcgaa
atcatcgctcaggccatggacaaggtcggcaaggaaggcgtgatcactgttgaagaaggc
aagagcctggccaacgaactggatgtcgtcgaaggcatgcaattcgaccgcggctacctg
tcgccctacttcatcaacaaccccgaaaagcaagccgcgattctggacaaccccttcgtg
ctgctgttcgacaagaagatcagcaacatccgcgacctgctgcccacgctggaagctgtg
gccaaggccggccgccccctgctgatcattgccgaagacgtcgaaggcgaagccctggcg
actctggtggtgaacaccatccgcggcatcctgaaggttgtggctgtgaaggctcccggc
ttcggcgaccgtcgcaaggccatgctggaagacatcgccatcctgactggcggcaaggtc
atcgctgaagaagtgggcctgtcgctggacaaggtgactctggaagatctgggccaagct
gctcgcgtcgaaatcggcaaggaaaacaccaccatcatcgacggtgccggcgctgctgac
gaaatcgaagcccgcgtcaagcaaatccgcatccagatcgaagaagccacttccgactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggtgttgccgtgatcaag
gttggcgctgccaccgaagtcgaaatgaaggaaaagaaggcccgcgttgaagacgccctg
cacgctacccgcgctgctgtggaagaaggcatcgtggccggcggtggcgtggccctgctg
cgcgccaagcaagccgttggcgccctggctaccggcaatgccgaacaagacgccggcatc
aagctggttctgaaggccattgaagcacctctgcgcgaaatcgtggccaacgccggtggc
gagccctcggtggtcgtgaacgccgtgctgaacggctccggcaactacggcttcaacgct
gccaacgacacctacggcgacatgctggaaatgggtatcctggatcccacaaaggtgact
cgcaccgctctgcagaacgctgcttccgtggcttccctgctgctgaccaccgagtgcatg
atcgccgaagcccccaaggctgacgcagctcctgccatgcccgacatgggcggcatgggc
ggcatgggcggcatgggcatgtaa
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integrated database retrieval system
