Comamonas thiooxydans: CtCNB1_0907
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Entry
CtCNB1_0907 CDS
T01109
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ctt
Comamonas thiooxydans
Pathway
ctt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CtCNB1_0907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctt03019
]
CtCNB1_0907
03009 Ribosome biogenesis [BR:
ctt03009
]
CtCNB1_0907
Messenger RNA biogenesis [BR:
ctt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CtCNB1_0907
Ribosome biogenesis [BR:
ctt03009
]
Eukaryotic type
Pre-60S particles
RNases
CtCNB1_0907
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
4HB_MCP_1
Motif
Other DBs
NCBI-ProteinID:
ACY31653
UniProt:
A0AA42PXW3
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All DBs
Position
1012262..1012786
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AA seq
174 aa
AA seq
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MVWLDCEMTGLNPDRDRIIEIAVVVSSSDLQIRVEGPVFAIHQSDELLGGMDAWNKGTHG
KSGLIDKVKASTISEAEAEAALIAFLGKYVPKGKTPLCGNSIGQDRRFMERYMPKLNNFF
HYRNIDVSTLKELAKRWKPEAYTSFKKAQRHTALADVHESIDELQHYRQQLLSV
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggctggactgcgaaatgacggggctgaaccccgaccgcgaccgcatcatcgag
attgccgtggtggtcagcagctccgatctgcagattcgcgtcgaaggcccggtattcgcc
attcatcagtccgacgagctgctgggcggcatggatgcctggaacaagggcacgcatggc
aaaagcggcctgatcgacaaggtcaaggcttcgaccatcagcgaagcagaggcggaagcc
gcactgattgcctttctgggcaaatacgtgcccaagggcaagacgccgctgtgcggcaac
agcattggtcaggacaggcgcttcatggagcgctacatgcccaagctcaacaatttcttt
cactatcgcaatatcgatgtgagcacgctcaaggagctggccaagcgctggaagcccgag
gcctatacctccttcaagaaggcgcagcgccacacggccctggccgatgtgcacgagtct
atcgacgagctgcagcattaccgccagcaactgctcagcgtctga
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